Paper · 2023 · Phytopathology

A Novel IncX Plasmid Mediates High-Level Oxytetracycline and Streptomycin Resistance in Erwinia amylovora from Commercial Pear Orchards in California

George W. Sundin; Jingyu Peng; Lindsay E. Brown; et al.

8
claims
11
verbatim quotes
24
citations
4
research areas
—
Not open access

Abstract

Isolates of the fire blight pathogen Erwinia amylovora with high-level resistance to oxytetracycline (minimal inhibitory concentration [MIC] > 100 μg/ml) and to streptomycin (MIC > 100 μg/ml) were recovered from four commercial pear orchards in California between 2018 and 2020. The two representative oxytetracycline- and streptomycin-resistant (OxyTc R -Sm R ) strains 32-10 and 33-1 were as virulent as the antibiotic susceptible strain 13-1 in causing blossom blight of pear and were recovered more than 50% of the time 7 days after co-inoculation to pear flowers with strain 13-1. In the field, inoculation of strain 32-10 to pear flowers that were pretreated with oxytetracycline at 200 μg/ml did not reduce disease compared with an untreated control. Four OxyTc R -Sm R strains were subjected to draft genome sequencing to identify the genetic determinants of antibiotic resistance and their location. A 43.6-kb IncX plasmid, designated pX11-7, was detected in each of the four strains, and this plasmid encoded the tetracycline-resistance gene tetB and the streptomycin-resistance gene pair strAB within a large putatively mobile genetic element consisting of the transposon Tn 10 that had inserted within the streptomycin-resistance transposon Tn 6082. We also determined that pX11-7 was conjugative and was transferred at a rate that was 10 4 to 10 5 higher into an E. amylovora strain isolated in California compared with an E. amylovora strain that was isolated in Michigan. The occurrence of high levels of resistance to both oxytetracycline and streptomycin in E. amylovora strains from commercial pear orchards in California significantly limits the options for blossom blight management in these locations.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Resistant E. amylovora isolates occurred in four California pear orchards.

Interactor
Erwinia amylovoraErwinia amylovorae0pathogen
Outcome
high-level resistance to oxytetracyclinee0
Value
> 100 μg/mle0
Setting
Californiae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗
Erwinia amylovora
Erwinia amylovora · InteractorSebastian Stabinger · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Isolates of the fire blight pathogen Erwinia amylovora with high-level resistance to oxytetracycline (minimal inhibitory concentration [MIC] > 100 μg/ml) and to streptomycin (MIC > 100 μg/ml) were recovered from four commercial pear orchards in California between 2018 and 2020”

✓ located verbatim in the source · abstract, characters 0–277 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Resistant strains caused pear blossom blight as virulently as susceptible strain 13-1.

Interactor
strains 32-10 and 33-1e0pathogen
Outcome
blossom blighte0
Direction
as virulente0
Comparator
antibiotic susceptible strain 13-1e0

Not reportedMaterial

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“strains 32-10 and 33-1 were as virulent as the antibiotic susceptible strain 13-1 in causing blossom blight of pear”

✓ located verbatim in the source · abstract, characters 363–478 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Resistant strains were recovered over half the time after co-inoculation to pear flowers.

Organ / stage
flowerse0
Interactor
strain 13-1e0pathogen
Outcome
recoverede0
Value
more than 50% of the timee0
Qualifier
7 days after co-inoculatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“were recovered more than 50% of the time 7 days after co-inoculation to pear flowers with strain 13-1”

✓ located verbatim in the source · abstract, characters 483–584 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Oxytetracycline pretreatment did not reduce blossom disease after resistant strain inoculation.

Organ / stage
flowerse0
Treatment
oxytetracycline at 200 μg/mle0
Interactor
strain 32-10e0pathogen
Outcome
diseasee0
Direction
did not reducee0
Comparator
untreated controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“inoculation of strain 32-10 to pear flowers that were pretreated with oxytetracycline at 200 μg/ml did not reduce disease compared with an untreated control”

✓ located verbatim in the source · abstract, characters 600–756 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A 43.6-kb IncX plasmid carrying tetracycline and streptomycin resistance genes was found in each resistant strain.

Interactor
four strainse0pathogen
Gene
pX11-7e0
Outcome
IncX plasmide0
Value
43.6-kbe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“A 43.6-kb IncX plasmid, designated pX11-7, was detected in each of the four strains, and this plasmid encoded the tetracycline-resistance gene tetB and the streptomycin-resistance gene pair strAB”

✓ located verbatim in the source · abstract, characters 909–1104 · show in text ↑
t0

“pear”

✓ located after whitespace/quote normalisation · title, characters 122–126 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Plasmid pX11-7 was conjugative.

Gene
pX11-7e0
Outcome
conjugativee0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“pX11-7 was conjugative”

✓ located verbatim in the source · abstract, characters 1286–1308 · show in text ↑
t0

“pear”

✓ located after whitespace/quote normalisation · title, characters 122–126 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Plasmid transfer was 10 4 to 10 5 higher to a California than Michigan E. amylovora strain.

Interactor
E. amylovoraErwinia amylovorae0pathogen
Outcome
transferred at a ratee0
Direction
highere0
Value
10 4 to 10 5e0
Comparator
E. amylovora strain that was isolated in Michigane0
Setting
Californiae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗
Erwinia amylovora
Erwinia amylovora · InteractorSebastian Stabinger · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“transferred at a rate that was 10 4 to 10 5 higher into an E. amylovora strain isolated in California compared with an E. amylovora strain that was isolated in Michigan”

✓ located verbatim in the source · abstract, characters 1317–1485 · show in text ↑
t0

“pear”

✓ located after whitespace/quote normalisation · title, characters 122–126 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors conclude that dual antibiotic resistance limits pear blossom blight management options in California orchards.

Interactor
E. amylovoraErwinia amylovorae0pathogen
Outcome
options for blossom blight managemente0
Setting
Californiae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗
Erwinia amylovora
Erwinia amylovora · InteractorSebastian Stabinger · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“occurrence of high levels of resistance to both oxytetracycline and streptomycin in E. amylovora strains from commercial pear orchards in California significantly limits the options for blossom blight management in these locations”

✓ located verbatim in the source · abstract, characters 1491–1721 · show in text ↑

oxytetracycline · disease · Pyrus communis (pear)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

2 in the opposite direction

  1. positive
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.