Paper · 2023 · Genes

Systematic Analysis of Galactinol Synthase and Raffinose Synthase Gene Families in Potato and Their Expression Patterns in Development and Abiotic Stress Responses

Quankai Jing; Airu Chen; Zhaoyan Lv; et al.

12
claims
22
verbatim quotes
23
citations
1
research areas
✓
Open access · cc-by

Abstract

Raffinose family oligosaccharides (RFOs) are very important for plant growth, development, and abiotic stress tolerance. Galactinol synthase (GolS) and raffinose synthase (RFS) are critical enzymes involved in RFO biosynthesis. However, the whole-genome identification and stress responses of their coding genes in potato remain unexplored. In this study, four StGolS and nine StRFS genes were identified and classified into three and five subgroups, respectively. Remarkably, a total of two StGolS and four StRFS genes in potato were identified to form collinear pairs with those in both Arabidopsis and tomato, respectively. Subsequent analysis revealed that StGolS4 exhibited significantly high expression levels in transport-related tissues, PEG-6000, and ABA treatments, with remarkable upregulation under salt stress. Additionally, StRFS5 showed similar responses to StGolS4, but StRFS4 and StRFS8 gene expression increased significantly under salt treatment and decreased in PEG-6000 and ABA treatments. Overall, these results lay a foundation for further research on the functional characteristics and molecular mechanisms of these two gene families in response to ABA, salt, and drought stresses, and provide a theoretical foundation and new gene resources for the abiotic-stress-tolerant breeding of potato.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Observationobservedoriginal resultmeasured

Claim · model-written summary

Four StGolS genes were identified and classified into three subgroups.

Gene
StGolSe0
Outcome
genes were identified and classifiede0
Value
foure0
Qualifier
threee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“four StGolS and nine StRFS genes were identified and classified into three and five subgroups, respectively”

✓ located verbatim in the source · abstract, characters 356–463 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 83–89 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Nine StRFS genes were identified and classified into five subgroups.

Gene
StRFSe0
Outcome
genes were identified and classifiede0
Value
ninee0
Qualifier
fivee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“four StGolS and nine StRFS genes were identified and classified into three and five subgroups, respectively”

✓ located verbatim in the source · abstract, characters 356–463 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 83–89 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Two potato StGolS genes formed collinear pairs with genes in Arabidopsis and tomato.

Gene
StGolSe0
Outcome
collinear pairse0
Value
twoe0
Qualifier
Arabidopsis and tomatoe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“two StGolS and four StRFS genes in potato were identified to form collinear pairs with those in both Arabidopsis and tomato”

✓ located verbatim in the source · abstract, characters 488–611 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Four potato StRFS genes formed collinear pairs with genes in Arabidopsis and tomato.

Gene
StRFSe0
Outcome
collinear pairse0
Value
foure0
Qualifier
Arabidopsis and tomatoe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“two StGolS and four StRFS genes in potato were identified to form collinear pairs with those in both Arabidopsis and tomato”

✓ located verbatim in the source · abstract, characters 488–611 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

StGolS4 expression was significantly high in transport-related tissues.

Organ / stage
transport-related tissuese0
Gene
StGolS4e0
Outcome
expression levelse0
Direction
highe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“StGolS4 exhibited significantly high expression levels in transport-related tissues, PEG-6000, and ABA treatments, with remarkable upregulation under salt stress”

✓ located verbatim in the source · abstract, characters 661–822 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 83–89 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

StGolS4 expression was significantly high under PEG-6000 treatment.

Treatment
PEG-6000e0
Gene
StGolS4e0
Outcome
expression levelse0
Direction
highe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“StGolS4 exhibited significantly high expression levels in transport-related tissues, PEG-6000, and ABA treatments, with remarkable upregulation under salt stress”

✓ located verbatim in the source · abstract, characters 661–822 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 83–89 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

StGolS4 expression was significantly high under ABA treatment.

Treatment
ABA treatmentse0
Gene
StGolS4e0
Outcome
expression levelse0
Direction
highe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“StGolS4 exhibited significantly high expression levels in transport-related tissues, PEG-6000, and ABA treatments, with remarkable upregulation under salt stress”

✓ located verbatim in the source · abstract, characters 661–822 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 83–89 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Salt stress markedly upregulated StGolS4.

Treatment
salt stresse0
Gene
StGolS4e0
Outcome
StGolS4e0
Direction
upregulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“StGolS4 exhibited significantly high expression levels in transport-related tissues, PEG-6000, and ABA treatments, with remarkable upregulation under salt stress”

✓ located verbatim in the source · abstract, characters 661–822 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 83–89 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

StRFS5 showed expression responses similar to StGolS4.

Gene
StRFS5e0
Outcome
similar responsese0
Comparator
StGolS4e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“StRFS5 showed similar responses to StGolS4”

✓ located verbatim in the source · abstract, characters 838–880 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 83–89 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Salt significantly increased StRFS4 and StRFS8 expression.

Treatment
salt treatmente0
Gene
StRFS4 and StRFS8e0
Outcome
gene expressione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“StRFS4 and StRFS8 gene expression increased significantly under salt treatment and decreased in PEG-6000 and ABA treatments”

✓ located verbatim in the source · abstract, characters 886–1009 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 83–89 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

PEG-6000 decreased StRFS4 and StRFS8 expression.

Treatment
PEG-6000e0
Gene
StRFS4 and StRFS8e0
Outcome
gene expressione0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“StRFS4 and StRFS8 gene expression increased significantly under salt treatment and decreased in PEG-6000 and ABA treatments”

✓ located verbatim in the source · abstract, characters 886–1009 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 83–89 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

ABA decreased StRFS4 and StRFS8 expression.

Treatment
ABA treatmentse0
Gene
StRFS4 and StRFS8e0
Outcome
gene expressione0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“StRFS4 and StRFS8 gene expression increased significantly under salt treatment and decreased in PEG-6000 and ABA treatments”

✓ located verbatim in the source · abstract, characters 886–1009 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 83–89 · show in text ↑

(+)-abscisic acid · molecular: expression · Solanum tuberosum (potato)Positive and negative results

9 papers: 8 positive, 1 negative or no effect

7 papers in the same direction as this paper · 1 in the opposite direction

  1. no effect
  2. positive
  3. positive

5 papers more in this group

See all 9 papers →

salinity · molecular: expression · Solanum tuberosum (potato)Positive and negative results

7 papers: 4 positive, 3 negative or no effect

3 papers in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. no effect
  3. no effect

3 papers more in this group

See all 7 papers →

drought · molecular: expression · Solanum tuberosum (potato)Positive and negative results

13 papers: 9 positive, 4 negative or no effect

8 papers in the same direction as this paper · 4 in the opposite direction

  1. no effect
  2. no effect
  3. negative

9 papers more in this group

See all 13 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.