Paper · 2023 · Frontiers in Plant Science

Conservation and divergence of expression of GA2-oxidase homeologs in apple (Malus x domestica Borkh.)

Songwen Zhang; Christopher Gottschalk; Steve van Nocker

5
claims
9
verbatim quotes
9
citations
3
research areas
✓
Open access · cc-by

Abstract

In domesticated apple ( Malus x domestica Borkh.) and other woody perennials, floral initiation can be repressed by gibberellins (GAs). The associated mechanism is a major unanswered question in plant physiology, and understanding organismal aspects of GA signaling in apple has important commercial applications. In plants, the major mechanism for elimination of GAs and resetting of GA signaling is through catabolism by GA2-oxidases (GA2ox). We found that the GA2ox gene family in apple comprises 16 genes representing eight, clearly defined homeologous pairs, which were named as MdGA2ox1A/1B to MdGA2ox8A/8B . Expression of the genes was analyzed in the various structures of the spur, where flowers are initiated, as well as in various structures of seedlings over one diurnal cycle and in response to water-deficit and salt stress. Among the results, we found that MdGA2ox2A/2B dominated expression in the shoot apex and were strongly upregulated in the apex after treatment with exogenous GA 3 , suggesting potential involvement in repression of flowering. Several MdGA2ox genes also showed preferential expression in the leaf petiole, fruit pedicel, and the seed coat of developing seeds, potentially representing mechanisms to limit diffusion of GAs across these structures. In all contexts studied, we documented both concerted and distinct expression of individual homeologs. This work introduces an accessible woody plant model for studies of GA signaling, GA2ox gene regulation, and conservation/divergence of expression of homeologous genes, and should find application in development of new cultivars of apple and other tree fruits.

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Claims 5

Observationobservedoriginal resultmeasured

Claim · model-written summary

The apple GA2ox gene family has 16 genes in eight homeologous pairs.

Gene
GA2oxe0
Outcome
16 genes representing eight, clearly defined homeologous pairse0
Value
16 genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“the GA2ox gene family in apple comprises 16 genes representing eight, clearly defined homeologous pairs, which were named as MdGA2ox1A/1B to MdGA2ox8A/8B .”

✓ located verbatim in the source · abstract, characters 459–614 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

MdGA2ox2A/2B dominated expression in the shoot apex.

Organ / stage
shoot apexe0
Gene
MdGA2ox2A/2Be0
Outcome
dominated expressione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“MdGA2ox2A/2B dominated expression in the shoot apex”

✓ located verbatim in the source · abstract, characters 872–923 · show in text ↑
t0

“apple”

✓ located verbatim in the source · title, characters 70–75 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Exogenous GA 3 strongly upregulated MdGA2ox2A/2B in the apex.

Organ / stage
shoot apexe0
Treatment
exogenous GA 3e0
Gene
MdGA2ox2A/2Be0
Outcome
expressione0
Direction
upregulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“MdGA2ox2A/2B dominated expression in the shoot apex and were strongly upregulated in the apex after treatment with exogenous GA 3”

✓ located verbatim in the source · abstract, characters 872–1001 · show in text ↑
t0

“apple”

✓ located verbatim in the source · title, characters 70–75 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Several MdGA2ox genes showed preferential expression in leaf petiole, fruit pedicel and developing seed coat.

Organ / stage
leaf petiole, fruit pedicel, and the seed coat of developing seedse0
Gene
MdGA2ox genese0
Outcome
preferential expressione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Several MdGA2ox genes also showed preferential expression in the leaf petiole, fruit pedicel, and the seed coat of developing seeds”

✓ located verbatim in the source · abstract, characters 1065–1196 · show in text ↑
t0

“apple”

✓ located verbatim in the source · title, characters 70–75 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Individual homeologs showed both concerted and distinct expression across studied contexts.

Outcome
both concerted and distinct expression of individual homeologse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“In all contexts studied, we documented both concerted and distinct expression of individual homeologs.”

✓ located verbatim in the source · abstract, characters 1285–1387 · show in text ↑
t0

“apple”

✓ located verbatim in the source · title, characters 70–75 · show in text ↑

Gibberellic acid · molecular: expression · Malus domestica (apple)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.