Paper · 2022 · International Journal of Molecular Sciences

Physiological, Agronomical, and Proteomic Studies Reveal Crucial Players in Rice Nitrogen Use Efficiency under Low Nitrogen Supply

Aadil Yousuf Tantray; Yehia Hazzazi; Altaf Ahmad

12
claims
24
verbatim quotes
22
citations
3
research areas
✓
Open access · cc-by

Abstract

Excessive use of nitrogenous fertilizers to enhance rice productivity has become a significant source of nitrogen (N) pollution and reduced sustainable agriculture. However, little information about the physiology of different growth stages, agronomic traits, and associated genetic bases of N use efficiency (NUE) are available at low-N supply. Two rice (Oryza sativa L.) cultivars were grown with optimum N (120 kg ha−1) and low N (60 kg ha−1) supply. Six growth stages were analyzed to measure the growth and physiological traits, as well as the differential proteomic profiles, of the rice cultivars. Cultivar Panvel outclassed Nagina 22 at low-N supply and exhibited improved growth and physiology at most of the growth stages and agronomic efficiency due to higher N uptake and utilization at low-N supply. On average, photosynthetic rate, chlorophyll content, plant biomass, leaf N content, and grain yield were decreased in cultivar Nagina 22 than Panvel was 8%, 11%, 21%, 19%, and 22%, respectively, under low-N supply. Furthermore, proteome analyses revealed that many proteins were upregulated and downregulated at the different growth stages under low-N supply. These proteins are associated with N and carbon metabolism and other physiological processes. This supports the genotypic differences in photosynthesis, N assimilation, energy stabilization, and rice-protein yield. Our study suggests that enhancing NUE at low-N supply demands distinct modifications in N metabolism and physiological assimilation. The NUE may be regulated by key identified differentially expressed proteins. These proteins might be the targets for improving crop NUE at low-N supply.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Cultivar Panvel outclassed Nagina 22 at low-N supply and showed improved growth and physiology at most growth stages.

Material
Panvele1
Organ / stage
growth stagese1
Treatment
low-N supplye1
Outcome
growth and physiologye1
Direction
improvede1
Comparator
Nagina 22e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e1

“Cultivar Panvel outclassed Nagina 22 at low-N supply and exhibited improved growth and physiology at most of the growth stages”

✓ located verbatim in the source · abstract, characters 605–731 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Panvel had higher agronomic efficiency at low-N supply, attributed to higher N uptake and utilization.

Treatment
low-N supplye2
Outcome
agronomic efficiencye2
Qualifier
higher N uptake and utilizatione2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e2

“agronomic efficiency due to higher N uptake and utilization at low-N supply”

✓ located verbatim in the source · abstract, characters 736–811 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Photosynthetic rate was lower in Nagina 22 than in Panvel by 8% at low-N supply.

Material
Nagina 22e3
Treatment
low-N supplye3
Outcome
photosynthetic ratee3
Direction
decreasede3
Value
8%e3
Qualifier
On averagee3
Comparator
Panvele3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e3

“On average, photosynthetic rate, chlorophyll content, plant biomass, leaf N content, and grain yield were decreased in cultivar Nagina 22 than Panvel was 8%, 11%, 21%, 19%, and 22%, respectively, under low-N supply”

✓ located verbatim in the source · abstract, characters 813–1027 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Chlorophyll content was lower in Nagina 22 than in Panvel by 11% at low-N supply.

Material
Nagina 22e3
Treatment
low-N supplye3
Outcome
chlorophyll contente3
Direction
decreasede3
Value
11%e3
Qualifier
On averagee3
Comparator
Panvele3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e3

“On average, photosynthetic rate, chlorophyll content, plant biomass, leaf N content, and grain yield were decreased in cultivar Nagina 22 than Panvel was 8%, 11%, 21%, 19%, and 22%, respectively, under low-N supply”

✓ located verbatim in the source · abstract, characters 813–1027 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Plant biomass was lower in Nagina 22 than in Panvel by 21% at low-N supply.

Material
Nagina 22e3
Treatment
low-N supplye3
Outcome
plant biomasse3
Direction
decreasede3
Value
21%e3
Qualifier
On averagee3
Comparator
Panvele3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e3

“On average, photosynthetic rate, chlorophyll content, plant biomass, leaf N content, and grain yield were decreased in cultivar Nagina 22 than Panvel was 8%, 11%, 21%, 19%, and 22%, respectively, under low-N supply”

✓ located verbatim in the source · abstract, characters 813–1027 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Leaf N content was lower in Nagina 22 than in Panvel by 19% at low-N supply.

Material
Nagina 22e3
Treatment
low-N supplye3
Outcome
leaf N contente3
Direction
decreasede3
Value
19%e3
Qualifier
On averagee3
Comparator
Panvele3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e3

“On average, photosynthetic rate, chlorophyll content, plant biomass, leaf N content, and grain yield were decreased in cultivar Nagina 22 than Panvel was 8%, 11%, 21%, 19%, and 22%, respectively, under low-N supply”

✓ located verbatim in the source · abstract, characters 813–1027 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Grain yield was lower in Nagina 22 than in Panvel by 22% at low-N supply.

Material
Nagina 22e3
Treatment
low-N supplye3
Outcome
grain yielde3
Direction
decreasede3
Value
22%e3
Qualifier
On averagee3
Comparator
Panvele3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e3

“On average, photosynthetic rate, chlorophyll content, plant biomass, leaf N content, and grain yield were decreased in cultivar Nagina 22 than Panvel was 8%, 11%, 21%, 19%, and 22%, respectively, under low-N supply”

✓ located verbatim in the source · abstract, characters 813–1027 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Many proteins were upregulated and downregulated at different growth stages under low-N supply.

Organ / stage
different growth stagese4
Treatment
low-N supplye4
Outcome
proteins were upregulated and downregulatede4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e4

“many proteins were upregulated and downregulated at the different growth stages under low-N supply”

✓ located verbatim in the source · abstract, characters 1074–1172 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

The identified proteins are associated with N and carbon metabolism and other physiological processes.

Gene
proteinse5
Outcome
N and carbon metabolisme5

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e5

“These proteins are associated with N and carbon metabolism and other physiological processes”

✓ located verbatim in the source · abstract, characters 1174–1266 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

NUE may be regulated by key differentially expressed proteins.

Gene
differentially expressed proteinse6
Outcome
NUEe6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e6

“The NUE may be regulated by key identified differentially expressed proteins”

✓ located verbatim in the source · abstract, characters 1522–1598 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Enhancing NUE at low-N supply demands distinct modifications in N metabolism and physiological assimilation.

Outcome
distinct modifications in N metabolism and physiological assimilatione7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e7

“Our study suggests that enhancing NUE at low-N supply demands distinct modifications in N metabolism and physiological assimilation”

✓ located verbatim in the source · abstract, characters 1389–1520 · show in text ↑
Recommendationhypothesisoriginal resultbasis n/a

Claim · model-written summary

The identified proteins may be targets for improving crop NUE at low-N supply.

Outcome
targets for improving crop NUEe7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice Nitrogen Use Efficiency”

✓ located verbatim in the source · title, characters 76–104 · show in text ↑
e7

“These proteins might be the targets for improving crop NUE at low-N supply”

✓ located verbatim in the source · abstract, characters 1600–1674 · show in text ↑

nitrogen · physiology: pigments · Oryza sativa (rice)Results differ

85 papers: 73 positive, 12 negative or no effect

11 papers in the same direction as this paper · 73 in the opposite direction

  1. positive
  2. positive
  3. positive

81 papers more in this group

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nitrogen · physiology: photosynthesis · Oryza sativa (rice)Positive and negative results

97 papers: 81 positive, 16 negative or no effect

15 papers in the same direction as this paper · 81 in the opposite direction

  1. negative
  2. positive
  3. positive

93 papers more in this group

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nitrogen · nutrient: content · Oryza sativa (rice)Positive and negative results

464 papers: 409 positive, 55 negative or no effect

54 papers in the same direction as this paper · 409 in the opposite direction

  1. positive
  2. positive
  3. positive

460 papers more in this group

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nitrogen · growth · Oryza sativa (rice)Positive and negative results

511 papers: 402 positive, 109 negative or no effect

401 papers in the same direction as this paper · 101 in the opposite direction · 8 reporting no difference from an alternative

  1. negative
  2. negative
  3. negative

507 papers more in this group

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nitrogen · yield · Oryza sativa (rice)Positive and negative results

2,045 papers: 1,803 positive, 242 negative or no effect

241 papers in the same direction as this paper · 1,803 in the opposite direction

  1. positive
  2. positive
  3. positive

2,041 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.