Paper · 2021 · Kahramanmaraş Sütçü İmam Üniversitesi Tarım ve Doğa Dergisi

Pathogenicity of Different Rhizobium radiobacter (Agrobacterium tumefaciens) Isolates and Their Identification with Conventional Methods

Nasibe TEKİNER; Recep KOTAN

7
claims
15
verbatim quotes
4
citations
2
research areas
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Open access · cc-by

Abstract

Rhizobium radiobacter is a significant causal agent that ranks among the top ten bacteria of molecular plant pathology in the world, has the largest range of hosts among plant pathogenic bacteria, and limits production and leads to economic losses in agriculture. The distinctive feature of the causal agent from other bacteria is the Ti plasmid, the extrachromosomal structure present in all virulent types. In this study, virulence of five R. radiobacter isolates (1A, 1B, 2A, 2B and RK 473) isolated from different rootstocks was tested in carrot slices, squash fruits, kalanchoe leaves, tomato and sunflower seedlings, and GF677, M9 and MM106 rootstocks, and hypersensitive response tests were conducted in tobacco plant. The isolates were diagnosed with biochemical and physiological tests by classical methods. All isolates formed tumors in carrot slices and squash fruits. 1A, 1B, 2A and 2B isolates formed tumors in the stem of GF677 peach rootstock, while it did not form any tumors on the stems of M9 and MM106 rootstocks. Tumor formation was observed in 1B isolate in the root application of GF677 peach rootstock, while no tumor formation was observed in other isolates. RK 473 isolate became pathogenic in M9 and MM106 apple rootstocks, while it was observed that the other isolates did not form any tumors. It was seen that none of the isolates became pathogenic in tomato and sunflower root and stem, and kalanchoe leaf applications. According to the virulence test results, 1B isolate was found out to be the most virulent isolate. Biochemical and physiological tests revealed the differences between isolates.

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Claims 7

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

All R. radiobacter isolates formed tumors in carrot slices and squash fruits

Taxon
carrot slices and squash fruitse1
Interactor
Rhizobium radiobacterAgrobacterium radiobactere0pathogen
Outcome
formed tumorse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Agrobacterium radiobacter
Agrobacterium radiobacter · Interactor · picture from its Wikimedia Commons categoryRobert L. Anderson, USDA Forest Service, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“All isolates formed tumors in carrot slices and squash fruits”

✓ located verbatim in the source · abstract, characters 817–878 · show in text ↑
e0

“Rhizobium radiobacter is a significant causal agent that ranks among the top ten bacteria”

✓ located verbatim in the source · abstract, characters 0–89 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Isolates 1A, 1B, 2A and 2B formed tumors in the stem of GF677 peach rootstock

Material
GF677 peach rootstocke2
Organ / stage
steme2
Interactor
Rhizobium radiobacterAgrobacterium radiobactere0pathogen
Outcome
formed tumorse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗
Agrobacterium radiobacter
Agrobacterium radiobacter · Interactor · picture from its Wikimedia Commons categoryRobert L. Anderson, USDA Forest Service, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e2

“1A, 1B, 2A and 2B isolates formed tumors in the stem of GF677 peach rootstock, while it did not form any tumors on the stems of M9 and MM106 rootstocks”

✓ located verbatim in the source · abstract, characters 880–1031 · show in text ↑
e0

“Rhizobium radiobacter is a significant causal agent that ranks among the top ten bacteria”

✓ located verbatim in the source · abstract, characters 0–89 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Isolate 1B formed tumors after root application to GF677 peach rootstock

Material
GF677 peach rootstocke3
Treatment
root applicatione3
Interactor
Rhizobium radiobacterAgrobacterium radiobactere0pathogen
Outcome
Tumor formatione3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗
Agrobacterium radiobacter
Agrobacterium radiobacter · Interactor · picture from its Wikimedia Commons categoryRobert L. Anderson, USDA Forest Service, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e3

“Tumor formation was observed in 1B isolate in the root application of GF677 peach rootstock, while no tumor formation was observed in other isolates”

✓ located verbatim in the source · abstract, characters 1033–1181 · show in text ↑
e0

“Rhizobium radiobacter is a significant causal agent that ranks among the top ten bacteria”

✓ located verbatim in the source · abstract, characters 0–89 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Isolate RK 473 became pathogenic on M9 and MM106 apple rootstocks

Material
M9 and MM106e4
Interactor
RK 473e4pathogen
Outcome
became pathogenice4
Qualifier
the other isolates did not form any tumorse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e4

“RK 473 isolate became pathogenic in M9 and MM106 apple rootstocks, while it was observed that the other isolates did not form any tumors”

✓ located verbatim in the source · abstract, characters 1183–1319 · show in text ↑
e0

“Rhizobium radiobacter is a significant causal agent that ranks among the top ten bacteria”

✓ located verbatim in the source · abstract, characters 0–89 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

None of the isolates became pathogenic on tomato and sunflower roots and stems or kalanchoe leaves

Interactor
Rhizobium radiobacterAgrobacterium radiobactere0pathogen
Outcome
became pathogenice5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Helianthus annuus
Helianthus annuus · TaxonJon Sullivan · Public domain · Wikimedia Commons ↗
Agrobacterium radiobacter
Agrobacterium radiobacter · Interactor · picture from its Wikimedia Commons categoryRobert L. Anderson, USDA Forest Service, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e5

“none of the isolates became pathogenic in tomato and sunflower root and stem, and kalanchoe leaf applications”

✓ located verbatim in the source · abstract, characters 1338–1447 · show in text ↑
e0

“Rhizobium radiobacter is a significant causal agent that ranks among the top ten bacteria”

✓ located verbatim in the source · abstract, characters 0–89 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Isolate 1B was the most virulent isolate in the virulence tests

Taxon
rootstockse2
Material
1B isolatee6
Interactor
Rhizobium radiobacterAgrobacterium radiobactere0pathogen
Outcome
most virulente6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Agrobacterium radiobacter
Agrobacterium radiobacter · Interactor · picture from its Wikimedia Commons categoryRobert L. Anderson, USDA Forest Service, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e6

“1B isolate was found out to be the most virulent isolate”

✓ located verbatim in the source · abstract, characters 1490–1546 · show in text ↑
e2

“1A, 1B, 2A and 2B isolates formed tumors in the stem of GF677 peach rootstock, while it did not form any tumors on the stems of M9 and MM106 rootstocks”

✓ located verbatim in the source · abstract, characters 880–1031 · show in text ↑
e0

“Rhizobium radiobacter is a significant causal agent that ranks among the top ten bacteria”

✓ located verbatim in the source · abstract, characters 0–89 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Biochemical and physiological tests revealed differences between R. radiobacter isolates

Taxon
Rhizobium radiobacterAgrobacterium radiobactere0
Outcome
differences between isolatese7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Agrobacterium radiobacter
Agrobacterium radiobacter · Taxon · picture from its Wikimedia Commons categoryRobert L. Anderson, USDA Forest Service, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e7

“Biochemical and physiological tests revealed the differences between isolates”

✓ located verbatim in the source · abstract, characters 1548–1625 · show in text ↑
e0

“Rhizobium radiobacter is a significant causal agent that ranks among the top ten bacteria”

✓ located verbatim in the source · abstract, characters 0–89 · show in text ↑