Paper · 2019 · Journal of Integrative Plant Biology

Proteomic and metabolomic profiling underlines the stage‐ and time‐dependent effects of high temperature on grape berry metabolism

David Lecourieux; Christian Kappel; Stéphane Claverol; et al.

6
claims
12
verbatim quotes
56
citations
6
research areas
✓
Open access

Abstract

Climate change scenarios predict an increase in mean air temperatures and in the frequency, intensity, and length of extreme temperature events in many wine-growing regions worldwide. Because elevated temperature has detrimental effects on berry growth and composition, it threatens the economic and environmental sustainability of wine production. Using Cabernet Sauvignon fruit-bearing cuttings, we investigated the effects of high temperature (HT) on grapevine berries through a label-free shotgun proteomic analysis coupled to a complementary metabolomic study. Among the 2,279 proteins identified, 592 differentially abundant proteins were found in berries exposed to HT. The gene ontology categories "stress," "protein," "secondary metabolism," and "cell wall" were predominantly altered under HT. High temperatures strongly impaired carbohydrate and energy metabolism, and the effects depended on the stage of development and duration of treatment. Transcript amounts correlated poorly with protein expression levels in HT berries, highlighting the value of proteomic studies in the context of heat stress. Furthermore, this work reveals that HT alters key proteins driving berry development and ripening. Finally, we provide a list of differentially abundant proteins that can be considered as potential markers for developing or selecting grape varieties that are better adapted to warmer climates or extreme heat waves.

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Claims 6

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

High temperature caused 592 berry proteins to differ in abundance among 2,279 identified proteins.

Taxon
grapet0
Treatment
HTe0
Outcome
differentially abundant proteinse0
Value
592e0

Not reportedComparatorDirection

Verbatim

e0

“Among the 2,279 proteins identified, 592 differentially abundant proteins were found in berries exposed to HT.”

✓ located verbatim in the source · abstract, characters 566–676 · show in text ↑
t0

“grape berry metabolism”

✓ located verbatim in the source · title, characters 108–130 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

High temperature predominantly altered stress, protein, secondary metabolism and cell wall gene ontology categories.

Taxon
grapet0
Treatment
HTe0
Outcome
gene ontology categories "stress," "protein," "secondary metabolism," and "cell wall"e0
Direction
alterede0

Not reportedComparator

Verbatim

e0

“The gene ontology categories "stress," "protein," "secondary metabolism," and "cell wall" were predominantly altered under HT.”

✓ located verbatim in the source · abstract, characters 677–803 · show in text ↑
t0

“grape berry metabolism”

✓ located verbatim in the source · title, characters 108–130 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

High temperatures strongly impaired carbohydrate and energy metabolism, depending on development stage and treatment duration.

Taxon
grapet0
Treatment
High temperaturese0
Outcome
carbohydrate and energy metabolisme0
Direction
impairede0
Qualifier
stage of development and duration of treatmente0

Not reportedComparator

Verbatim

e0

“High temperatures strongly impaired carbohydrate and energy metabolism, and the effects depended on the stage of development and duration of treatment.”

✓ located verbatim in the source · abstract, characters 804–955 · show in text ↑
t0

“grape berry metabolism”

✓ located verbatim in the source · title, characters 108–130 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Transcript amounts correlated poorly with protein expression levels in heated berries.

Taxon
grapet0
Treatment
HTe0
Outcome
protein expression levelse0
Qualifier
correlated poorlye0

Not reportedDirection

Verbatim

e0

“Transcript amounts correlated poorly with protein expression levels in HT berries”

✓ located verbatim in the source · abstract, characters 956–1037 · show in text ↑
t0

“grape berry metabolism”

✓ located verbatim in the source · title, characters 108–130 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

High temperature altered proteins driving grape berry development and ripening.

Taxon
grapet0
Treatment
HTe0
Outcome
key proteins driving berry development and ripeninge0
Direction
alterse0

Not reportedComparator

Verbatim

e0

“HT alters key proteins driving berry development and ripening”

✓ located verbatim in the source · abstract, characters 1150–1211 · show in text ↑
t0

“grape berry metabolism”

✓ located verbatim in the source · title, characters 108–130 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The study provides differentially abundant proteins as potential markers for heat adapted grape varieties.

Taxon
grapee0
Outcome
list of differentially abundant proteinse0

Not reportedComparatorValue

Verbatim

e0

“we provide a list of differentially abundant proteins that can be considered as potential markers for developing or selecting grape varieties that are better adapted to warmer climates or extreme heat waves”

✓ located verbatim in the source · abstract, characters 1222–1428 · show in text ↑
t0

“grape berry metabolism”

✓ located verbatim in the source · title, characters 108–130 · show in text ↑

heat · quality: sugar starch · VitisPositive and negative results

5 papers: 3 positive, 2 negative or no effect

2 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. negative
  3. positive

1 paper more in this group

See all 5 papers →

heat · quality: postharvest · VitisPositive and negative results

8 papers: 4 positive, 4 negative or no effect

3 papers in the same direction as this paper · 4 in the opposite direction

  1. negative
  2. no effect
  3. negative

4 papers more in this group

See all 8 papers →

heat · molecular: expression · VitisPositive and negative results

10 papers: 3 positive, 7 negative or no effect

2 papers in the same direction as this paper · 7 in the opposite direction

  1. no effect
  2. no effect
  3. negative

6 papers more in this group

See all 10 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.