Paper · 2019 · Horticulture Research

Low temperature upregulates cwp expression and modifies alternative splicing patterns, increasing the severity of cwp-induced tomato fruit cuticular microfissures

Noam Chechanovsky; Ran Hovav; Rina Frenkel; et al.

5
claims
10
verbatim quotes
20
citations
2
research areas
✓
Open access · cc-by

Abstract

Abstract The cwp (cuticular water permeability) gene controls the development of cuticular microfissuring and subsequent fruit dehydration in tomato. The gene underwent silencing in the evolution of the fleshy cultivated tomato but is expressed in the primitive wild tomato relatives. The introgression of the expressed allele from the wild S. habrochaites ( cwp h ) into the cultivated tomato ( Solanum lycopersicum ) leads to the phenotype of fruit water loss during and following ripening. In this report, we show that low temperature impacts on the severity of the cuticular microfissure phenotype via a combination of effects on both expression and alternative splicing of cwp h . The cwp gene, comprising four exons and three introns, undergoes post-transcriptional alternative splicing processes, leading to seven alternative transcripts that differ in reading-frame lengths. Transgenic plants expressing each of the alternative transcripts identified the longest reading frame (VAR1) as the functional splice variant. Low temperature led to a strong upregulation of cwp h expression, compounded by an increase in the relative proportion of the functional VAR1 transcript, leading to increased severity of microfissuring of the cuticle. In summary, we demonstrate the molecular mechanism behind the horticultural phenomenon of the low-temperature effect on cuticular microfissures in the dehydrating tomato.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 5

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Low temperature strongly upregulated cwp h expression in tomato.

Treatment
Low temperaturee5
Gene
cwp he5
Outcome
cwp h expressione5
Direction
upregulatione5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The introgression of the expressed allele from the wild S. habrochaites ( cwp h ) into the cultivated tomato ( Solanum lycopersicum ) leads to the phenotype of fruit water loss during and following ripening”

✓ located verbatim in the source · abstract, characters 285–491 · show in text ↑
e5

“Low temperature led to a strong upregulation of cwp h expression, compounded by an increase in the relative proportion of the functional VAR1 transcript, leading to increased severity of microfissuring of the cuticle”

✓ located verbatim in the source · abstract, characters 1026–1242 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Low temperature increased the relative proportion of the functional VAR1 transcript in tomato.

Treatment
Low temperaturee5
Gene
VAR1e5
Outcome
relative proportion of the functional VAR1 transcripte5
Direction
increasee5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The introgression of the expressed allele from the wild S. habrochaites ( cwp h ) into the cultivated tomato ( Solanum lycopersicum ) leads to the phenotype of fruit water loss during and following ripening”

✓ located verbatim in the source · abstract, characters 285–491 · show in text ↑
e5

“Low temperature led to a strong upregulation of cwp h expression, compounded by an increase in the relative proportion of the functional VAR1 transcript, leading to increased severity of microfissuring of the cuticle”

✓ located verbatim in the source · abstract, characters 1026–1242 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Low temperature increased the severity of cuticular microfissuring in tomato fruit.

Treatment
Low temperaturee5
Outcome
severity of microfissuring of the cuticlee5
Direction
increasede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The introgression of the expressed allele from the wild S. habrochaites ( cwp h ) into the cultivated tomato ( Solanum lycopersicum ) leads to the phenotype of fruit water loss during and following ripening”

✓ located verbatim in the source · abstract, characters 285–491 · show in text ↑
e5

“Low temperature led to a strong upregulation of cwp h expression, compounded by an increase in the relative proportion of the functional VAR1 transcript, leading to increased severity of microfissuring of the cuticle”

✓ located verbatim in the source · abstract, characters 1026–1242 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The longest reading-frame transcript, VAR1, is the functional splice variant of cwp in tomato.

Gene
VAR1e4
Outcome
functional splice variante4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The introgression of the expressed allele from the wild S. habrochaites ( cwp h ) into the cultivated tomato ( Solanum lycopersicum ) leads to the phenotype of fruit water loss during and following ripening”

✓ located verbatim in the source · abstract, characters 285–491 · show in text ↑
e4

“Transgenic plants expressing each of the alternative transcripts identified the longest reading frame (VAR1) as the functional splice variant”

✓ located verbatim in the source · abstract, characters 883–1024 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The cwp gene undergoes alternative splicing and produces seven alternative transcripts differing in reading-frame length.

Gene
cwp genee3
Outcome
alternative transcriptse3
Value
sevene3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The introgression of the expressed allele from the wild S. habrochaites ( cwp h ) into the cultivated tomato ( Solanum lycopersicum ) leads to the phenotype of fruit water loss during and following ripening”

✓ located verbatim in the source · abstract, characters 285–491 · show in text ↑
e3

“The cwp gene, comprising four exons and three introns, undergoes post-transcriptional alternative splicing processes, leading to seven alternative transcripts that differ in reading-frame lengths”

✓ located verbatim in the source · abstract, characters 686–881 · show in text ↑

cold · disease · Solanum lycopersicum (tomato)Positive and negative results

5 papers: 3 positive, 2 negative or no effect

1 paper in the same direction as this paper · 3 in the opposite direction

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.