Paper · 2019 · Land Degradation and Development

Continuous cropping of soybean alters the bulk and rhizospheric soil fungal communities in a Mollisol of Northeast PR China

Junjie Liu; Qin Yao; Yansheng Li; et al.

11
claims
22
verbatim quotes
65
citations
2
research areas
—
Not open access

Abstract

Abstract Continuous cropping of soybean causes soil degradation and decreased soybean yield in Northeast PR China. However, the mechanism underlying the effect on soil fungal communities and the relationship between these effects and cropping systems have not yet been fully elucidated. In this study, we comparatively investigated the abundance, diversity, and structures of fungal communities in the bulk and rhizospheric soils of soybean grown in two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize using real‐time Polymerase Chain Reaction (PCR) and Illumina MiSeq sequencing methods. The results showed that the rhizospheric soil fungal abundance was significantly higher in CC than in CR, but the opposite trend was observed in bulk soils. CC decreased the fungal alpha diversity in both bulk and rhizospheric soils compared with CR. The fungal community compositions were distinctly different between CC and CR in both bulk and rhizospheric soils, and the composition and diversity in bulk soils were predominantly affected by the soil carbon to nitrigen (C/N) ratio. The soil fungal functional groups varied between the two cropping systems; CC increased the relative abundances of the potentially pathogenic fungi Fusarium oxysporum and Lectera longa and beneficial fungi Mortierella sp. and Paecilomyces lilacinus . In contrast, CR increased the relative abundance of Ustilago maydis , which is a pathogen that causes corn smut. Our findings showed that CC increased the abundances of plant pathogens, which is harmful to soybean growth; in contrast, the abundances of some beneficial fungi also increased, which suggested that suppressive soils might be developed after long‐term CC.

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Claims 11

Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Rhizospheric soil fungal abundance was significantly higher under continuous cropping of soybean than under rotation with maize.

Taxon
soybeanGlycine maxe1
Treatment
CCe2
Outcome
fungal abundancee2
Direction
significantly highere2
Comparator
CRe2
Setting
rhizospheric soile2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“the rhizospheric soil fungal abundance was significantly higher in CC than in CR, but the opposite trend was observed in bulk soils”

✓ located verbatim in the source · abstract, characters 666–797 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

In bulk soil, fungal abundance was lower under continuous soybean cropping than under rotation, the opposite of the rhizosphere trend.

Taxon
soybeanGlycine maxe1
Treatment
CCe1
Outcome
fungal abundancee2
Direction
lowerinferrede2
Qualifier
bulk soilse2
Comparator
CRe2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“the rhizospheric soil fungal abundance was significantly higher in CC than in CR, but the opposite trend was observed in bulk soils”

✓ located verbatim in the source · abstract, characters 666–797 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Continuous cropping decreased fungal alpha diversity in both bulk and rhizospheric soils compared with rotation.

Taxon
soybeanGlycine maxe1
Treatment
CCe2
Outcome
fungal alpha diversitye2
Direction
decreasede2
Comparator
CRe2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“CC decreased the fungal alpha diversity in both bulk and rhizospheric soils compared with CR”

✓ located verbatim in the source · abstract, characters 799–891 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

The fungal community composition was distinctly different between continuous cropping and rotation in both bulk and rhizospheric soils.

Taxon
soybeanGlycine maxe1
Treatment
CCe2
Outcome
fungal community compositionse2
Direction
distinctly differente2
Comparator
CRe2
Setting
bulk and rhizospheric soilse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“The fungal community compositions were distinctly different between CC and CR in both bulk and rhizospheric soils, and the composition and diversity in bulk soils were predominantly affected by the soil carbon to nitrigen (C/N) ratio”

✓ located verbatim in the source · abstract, characters 893–1126 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Bulk soil fungal composition and diversity were predominantly affected by the soil C/N ratio.

Taxon
soybeanGlycine maxe1
Compound
soil carbon to nitrigen (C/N) ratioe2
Outcome
composition and diversity in bulk soilse2
Direction
predominantly affectede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“The fungal community compositions were distinctly different between CC and CR in both bulk and rhizospheric soils, and the composition and diversity in bulk soils were predominantly affected by the soil carbon to nitrigen (C/N) ratio”

✓ located verbatim in the source · abstract, characters 893–1126 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Continuous cropping increased the relative abundance of the potentially pathogenic fungus Fusarium oxysporum in soybean soil.

Taxon
soybeanGlycine maxe1
Treatment
CCe2
Interactor
Fusarium oxysporumFusarium oxysporume2pathogen
Outcome
relative abundancese2
Direction
increasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Fusarium oxysporum
Fusarium oxysporum · InteractorClemson University - USDA Cooperative Extension Slide Series · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“CC increased the relative abundances of the potentially pathogenic fungi Fusarium oxysporum and Lectera longa and beneficial fungi Mortierella sp. and Paecilomyces lilacinus”

✓ located verbatim in the source · abstract, characters 1203–1376 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Continuous cropping increased the relative abundance of the potentially pathogenic fungus Lectera longa in soybean soil.

Taxon
soybeanGlycine maxe1
Treatment
CCe2
Interactor
Lectera longaLectera longae2pathogen
Outcome
relative abundancese2
Direction
increasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“CC increased the relative abundances of the potentially pathogenic fungi Fusarium oxysporum and Lectera longa and beneficial fungi Mortierella sp. and Paecilomyces lilacinus”

✓ located verbatim in the source · abstract, characters 1203–1376 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Continuous cropping increased the relative abundance of the beneficial fungus Mortierella sp. in soybean soil.

Taxon
soybeanGlycine maxe1
Treatment
CCe2
Interactor
Mortierella sp.Mortierellae2other
Outcome
relative abundancese2
Direction
increasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Mortierella
Mortierella · Interactor · picture from its Wikimedia Commons categoryMedmyco · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“CC increased the relative abundances of the potentially pathogenic fungi Fusarium oxysporum and Lectera longa and beneficial fungi Mortierella sp. and Paecilomyces lilacinus”

✓ located verbatim in the source · abstract, characters 1203–1376 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Continuous cropping increased the relative abundance of the beneficial fungus Paecilomyces lilacinus in soybean soil.

Taxon
soybeanGlycine maxe1
Treatment
CCe2
Interactor
Paecilomyces lilacinusPurpureocillium lilacinume2other
Outcome
relative abundancese2
Direction
increasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Purpureocillium lilacinum
Purpureocillium lilacinum · InteractorAuthor not explicitly stated. Article is by Jeanne Carey, Ron D’Amico, Deanna A. Sutton, and Michael G. Rinald · Public domain · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“CC increased the relative abundances of the potentially pathogenic fungi Fusarium oxysporum and Lectera longa and beneficial fungi Mortierella sp. and Paecilomyces lilacinus”

✓ located verbatim in the source · abstract, characters 1203–1376 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Rotation with maize increased the relative abundance of the pathogen Ustilago maydis, which causes corn smut, in soybean soil.

Taxon
soybeanGlycine maxe1
Treatment
CRe2
Interactor
Ustilago maydisMycosarcoma maydise2pathogen
Outcome
relative abundancee2
Direction
increasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Mycosarcoma maydis
Mycosarcoma maydis · Interactorstu_spivack · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“CR increased the relative abundance of Ustilago maydis, which is a pathogen that causes corn smut”

✓ located after whitespace/quote normalisation · abstract, characters 1392–1490 · show in text ↑
Associationhypothesisoriginal resultbasis n/a

Claim · model-written summary

Suppressive soils might develop after long-term continuous cropping of soybean.

Taxon
soybeanGlycine maxe1
Treatment
long‐term CCe2
Outcome
suppressive soilse2
Direction
might be developede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e1

“two cropping systems, that is, continuous cropping (CC) of soybean and cropping rotation (CR) with maize”

✓ located verbatim in the source · abstract, characters 450–554 · show in text ↑
e2

“suppressive soils might be developed after long‐term CC”

✓ located verbatim in the source · abstract, characters 1691–1746 · show in text ↑

rotation · Fusarium oxysporum · Glycine max (soybean)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

rotation · ecology: diversity · Glycine max (soybean)Results agree

4 papers: 0 positive, 4 negative or no effect

3 papers in the same direction as this paper

  1. no effect
  2. no effect
  3. no effect
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.