Paper · 2019 · Plants

DRB1, DRB2 and DRB4 Are Required for Appropriate Regulation of the microRNA399/PHOSPHATE2 Expression Module in Arabidopsis thaliana

Joseph L. Pegler; Jackson M. J. Oultram; Christopher P. L. Grof; et al.

4
claims
11
verbatim quotes
15
citations
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research areas
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Open access · cc-by

Abstract

Adequate phosphorous (P) is essential to plant cells to ensure normal plant growth and development. Therefore, plants employ elegant mechanisms to regulate P abundance across their developmentally distinct tissues. One such mechanism is PHOSPHATE2 (PHO2)-directed ubiquitin-mediated degradation of a cohort of phosphate (PO4) transporters. PHO2 is itself under tight regulation by the PO4 responsive microRNA (miRNA), miR399. The DOUBLE-STRANDED RNA BINDING (DRB) proteins, DRB1, DRB2 and DRB4, have each been assigned a specific functional role in the Arabidopsis thaliana (Arabidopsis) miRNA pathway. Here, we assessed the requirement of DRB1, DRB2 and DRB4 to regulate the miR399/PHO2 expression module under PO4 starvations conditions. Via the phenotypic and molecular assessment of the knockout mutant plant lines, drb1, drb2 and drb4, we show here that; (1) DRB1 and DRB2 are required to maintain P homeostasis in Arabidopsis shoot and root tissues; (2) DRB1 is the primary DRB required for miR399 production; (3) DRB2 and DRB4 play secondary roles in regulating miR399 production, and; (4) miR399 appears to direct expression regulation of the PHO2 transcript via both an mRNA cleavage and translational repression mode of RNA silencing. Together, the hierarchical contribution of DRB1, DRB2 and DRB4 demonstrated here to be required for the appropriate regulation of the miR399/PHO2 expression module identifies the extreme importance of P homeostasis maintenance in Arabidopsis to ensure that numerous vital cellular processes are maintained across Arabidopsis tissues under a changing cellular environment.

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Claims 4

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

DRB1 and DRB2 are required to maintain P homeostasis in Arabidopsis shoot and root tissues.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Organ / stage
shoot and root tissuese1
Treatment
knockout mutant plant linese5
Gene
DRB1 and DRB2e1
Outcome
P homeostasise1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 111–131 · show in text ↑
e1

“DRB1 and DRB2 are required to maintain P homeostasis in Arabidopsis shoot and root tissues”

✓ located verbatim in the source · abstract, characters 864–954 · show in text ↑
e5

“knockout mutant plant lines, drb1, drb2 and drb4”

✓ located verbatim in the source · abstract, characters 791–839 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

DRB1 is the primary DRB required for miR399 production.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
knockout mutant plant linese5
Gene
DRB1e2
Outcome
miR399 productione2

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 111–131 · show in text ↑
e2

“DRB1 is the primary DRB required for miR399 production”

✓ located verbatim in the source · abstract, characters 960–1014 · show in text ↑
e5

“knockout mutant plant lines, drb1, drb2 and drb4”

✓ located verbatim in the source · abstract, characters 791–839 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

DRB2 and DRB4 play secondary roles in regulating miR399 production.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
knockout mutant plant linese5
Gene
DRB2 and DRB4e3
Outcome
miR399 productione3

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 111–131 · show in text ↑
e3

“DRB2 and DRB4 play secondary roles in regulating miR399 production”

✓ located verbatim in the source · abstract, characters 1020–1086 · show in text ↑
e5

“knockout mutant plant lines, drb1, drb2 and drb4”

✓ located verbatim in the source · abstract, characters 791–839 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

miR399 appears to direct expression regulation of the PHO2 transcript via both mRNA cleavage and translational repression.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
PHO2e4
Outcome
expression regulation of the PHO2 transcripte4
Qualifier
mRNA cleavage and translational repressione4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 111–131 · show in text ↑
e4

“miR399 appears to direct expression regulation of the PHO2 transcript via both an mRNA cleavage and translational repression mode of RNA silencing”

✓ located verbatim in the source · abstract, characters 1097–1243 · show in text ↑

loss of function · yield · Arabidopsis thaliana (thale cress)Positive and negative results

18 papers: 5 positive, 13 negative or no effect

4 papers in the same direction as this paper · 13 in the opposite direction

  1. no effect
  2. no effect
  3. negative

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.