Paper · 2005 · Proceedings of the National Academy of Sciences

Generation of phytate-free seeds in Arabidopsis through disruption of inositol polyphosphate kinases

Jill Stevenson-Paulik; Robert J. Bastidas; Shean-Tai Chiou; et al.

7
claims
13
verbatim quotes
347
citations
4
research areas
✓
Open access

Abstract

Phytate (inositol hexakisphosphate, IP6) is a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate store in plant seeds. Here, we report a requirement for inositol polyphosphate kinases, AtIPK1 and AtIPK2beta, for the later steps of phytate synthesis in Arabidopsis thaliana. Coincident disruption of these kinases nearly ablates seed phytate without accumulation of phytate precursors, increases seed-free phosphate by 10-fold, and has normal seed yield. Additionally, we find a requirement for inositol tetrakisphosphate (IP4)/inositol pentakisphosphate (IP5) 2-kinase activity in phosphate sensing and root hair elongation. Our results define a commercially viable strategy for the genetic engineering of phytate-free grain and provide insights into the role of inositol polyphosphate kinases in phosphate signaling biology.

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The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 7

Mechanismobservedoriginal resultmeasured

Claim · model-written summary

AtIPK1 and AtIPK2beta are required for the later steps of phytate synthesis in Arabidopsis thaliana.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Gene
AtIPK1 and AtIPK2betae0
Outcome
phytate synthesise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“inositol polyphosphate kinases, AtIPK1 and AtIPK2beta, for the later steps of phytate synthesis in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 195–314 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Coincident disruption of AtIPK1 and AtIPK2beta nearly ablates seed phytate in Arabidopsis thaliana.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
Coincident disruption of these kinasese1
Outcome
seed phytatee1
Direction
nearly ablatese1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“inositol polyphosphate kinases, AtIPK1 and AtIPK2beta, for the later steps of phytate synthesis in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 195–314 · show in text ↑
e1

“Coincident disruption of these kinases nearly ablates seed phytate”

✓ located verbatim in the source · abstract, characters 316–382 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Coincident disruption of these kinases does not lead to accumulation of phytate precursors in Arabidopsis thaliana seeds.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
Coincident disruption of these kinasese1
Outcome
phytate precursorse1
Direction
without accumulatione1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“inositol polyphosphate kinases, AtIPK1 and AtIPK2beta, for the later steps of phytate synthesis in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 195–314 · show in text ↑
e1

“Coincident disruption of these kinases nearly ablates seed phytate without accumulation of phytate precursors”

✓ located verbatim in the source · abstract, characters 316–425 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Coincident disruption of these kinases increases seed-free phosphate by 10-fold in Arabidopsis thaliana.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
Coincident disruption of these kinasese1
Outcome
seed-free phosphatee1
Direction
increasese1
Value
10-folde1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“inositol polyphosphate kinases, AtIPK1 and AtIPK2beta, for the later steps of phytate synthesis in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 195–314 · show in text ↑
e1

“Coincident disruption of these kinases nearly ablates seed phytate without accumulation of phytate precursors, increases seed-free phosphate by 10-fold”

✓ located verbatim in the source · abstract, characters 316–467 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Coincident disruption of these kinases leaves seed yield normal in Arabidopsis thaliana.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
Coincident disruption of these kinasese1
Outcome
seed yielde1
Direction
normale1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“inositol polyphosphate kinases, AtIPK1 and AtIPK2beta, for the later steps of phytate synthesis in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 195–314 · show in text ↑
e1

“Coincident disruption of these kinases nearly ablates seed phytate without accumulation of phytate precursors, increases seed-free phosphate by 10-fold, and has normal seed yield”

✓ located verbatim in the source · abstract, characters 316–494 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

IP4/IP5 2-kinase activity is required for phosphate sensing and root hair elongation in Arabidopsis thaliana.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Gene
inositol tetrakisphosphate (IP4)/inositol pentakisphosphate (IP5) 2-kinasee1
Outcome
phosphate sensing and root hair elongatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“inositol polyphosphate kinases, AtIPK1 and AtIPK2beta, for the later steps of phytate synthesis in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 195–314 · show in text ↑
e1

“Additionally, we find a requirement for inositol tetrakisphosphate (IP4)/inositol pentakisphosphate (IP5) 2-kinase activity in phosphate sensing and root hair elongation”

✓ located verbatim in the source · abstract, characters 496–665 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The results define a commercially viable strategy for genetic engineering of phytate-free grain.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Outcome
commercially viable strategy for the genetic engineering of phytate-free graine1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“inositol polyphosphate kinases, AtIPK1 and AtIPK2beta, for the later steps of phytate synthesis in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 195–314 · show in text ↑
e1

“Our results define a commercially viable strategy for the genetic engineering of phytate-free grain”

✓ located verbatim in the source · abstract, characters 667–766 · show in text ↑

loss of function · yield · Arabidopsis thaliana (thale cress)Positive and negative results

18 papers: 5 positive, 13 negative or no effect

12 papers in the same direction as this paper · 5 in the opposite direction

  1. positive
  2. positive
  3. positive

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loss of function · molecular: metabolites · Arabidopsis thaliana (thale cress)Positive and negative results

76 papers: 16 positive, 60 negative or no effect

15 papers in the same direction as this paper · 60 in the opposite direction

  1. negative
  2. negative
  3. no effect

72 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.