Paper · 2018 · Applied Microbiology and Biotechnology

Soil acidification amendments change the rhizosphere bacterial community of tobacco in a bacterial wilt affected field

Guihua Shen; Shuting Zhang; Xiaojiao Liu; et al.

8
claims
16
verbatim quotes
132
citations
2
research areas
✓
Open access · cc-by

Abstract

Application of soil amendments has been wildly used to increase soil pH and control bacterial wilt. However, little is known about causal shifts in the rhizosphere microbial community of crops, especially when the field naturally harbors the disease of bacterial wilt to tobacco for many years due to long-term continuous cropping and soil acidification. In this study, biochar (CP), lime (LM), oyster shell powder (OS) and no soil amendment additions (Control; CK) were assessed for their abilities to improve the soil acidification, change the composition of rhizosphere soil bacterial communities and thus control tobacco bacterial wilt. The results showed that oyster shell powder significantly increased soil pH by 0.77 and reduced the incidence of tobacco bacterial wilt by 36.67% compared to the control. The Illumina sequencing -based community analysis showed that soil amendment applications affected the composition of rhizosphere bacterial community and increased the richness and diversity. In contrast, the richness and diversity correlated negatively to disease incidence. Using LEfSe analyses, 11 taxa were found to be closely related with disease suppression, in which Saccharibacteria, Aeromicrobium, and Pseudoxanthomonas could be potential indicators of disease suppression. Our results suggested that the suppression of bacterial wilt after the application of soil amendments (especially oyster shell powder) was attributed to the improved soil pH and increased bacterial richness and diversity.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Oyster shell powder increased soil pH by 0.77 relative to control.

Treatment
oyster shell powdere0
Outcome
soil pHe0
Direction
increasede0
Value
0.77e0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“oyster shell powder significantly increased soil pH by 0.77 and reduced the incidence of tobacco bacterial wilt by 36.67% compared to the control”

✓ located verbatim in the source · abstract, characters 665–810 · show in text ↑
t0

“rhizosphere bacterial community of tobacco”

✓ located verbatim in the source · title, characters 41–83 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Oyster shell powder reduced tobacco bacterial wilt incidence by 36.67% relative to control.

Treatment
oyster shell powdere0
Outcome
incidence of tobacco bacterial wilte0
Direction
reducede0
Value
36.67%e0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“oyster shell powder significantly increased soil pH by 0.77 and reduced the incidence of tobacco bacterial wilt by 36.67% compared to the control”

✓ located verbatim in the source · abstract, characters 665–810 · show in text ↑
t0

“rhizosphere bacterial community of tobacco”

✓ located verbatim in the source · title, characters 41–83 · show in text ↑
Intervention effectobservedoriginal resultmixedmeasured

Claim · model-written summary

Soil amendments changed rhizosphere bacterial community composition.

Treatment
soil amendment applicationse0
Outcome
composition of rhizosphere bacterial communitye0
Direction
affectede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“soil amendment applications affected the composition of rhizosphere bacterial community and increased the richness and diversity”

✓ located verbatim in the source · abstract, characters 874–1002 · show in text ↑
t0

“rhizosphere bacterial community of tobacco”

✓ located verbatim in the source · title, characters 41–83 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Soil amendments increased rhizosphere bacterial richness and diversity.

Treatment
soil amendment applicationse0
Outcome
richness and diversitye0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“soil amendment applications affected the composition of rhizosphere bacterial community and increased the richness and diversity”

✓ located verbatim in the source · abstract, characters 874–1002 · show in text ↑
t0

“rhizosphere bacterial community of tobacco”

✓ located verbatim in the source · title, characters 41–83 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Rhizosphere bacterial richness and diversity correlated negatively with disease incidence.

Treatment
richness and diversitye0
Outcome
disease incidencee0
Direction
negativelye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“richness and diversity correlated negatively to disease incidence”

✓ located verbatim in the source · abstract, characters 1021–1086 · show in text ↑
t0

“rhizosphere bacterial community of tobacco”

✓ located verbatim in the source · title, characters 41–83 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Eleven bacterial taxa were closely related to disease suppression.

Treatment
11 taxae0
Outcome
disease suppressione0
Direction
closely relatede0
Value
11 taxae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“11 taxa were found to be closely related with disease suppression, in which Saccharibacteria, Aeromicrobium, and Pseudoxanthomonas could be potential indicators of disease suppression”

✓ located verbatim in the source · abstract, characters 1110–1293 · show in text ↑
t0

“rhizosphere bacterial community of tobacco”

✓ located verbatim in the source · title, characters 41–83 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Saccharibacteria, Aeromicrobium and Pseudoxanthomonas were proposed as potential indicators of disease suppression.

Outcome
indicators of disease suppressione0
Qualifier
could be potentiale0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Saccharibacteria, Aeromicrobium, and Pseudoxanthomonas could be potential indicators of disease suppression”

✓ located verbatim in the source · abstract, characters 1186–1293 · show in text ↑
t0

“rhizosphere bacterial community of tobacco”

✓ located verbatim in the source · title, characters 41–83 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors attributed amendment-associated wilt suppression to higher soil pH and bacterial richness and diversity.

Treatment
application of soil amendments (especially oyster shell powder)e0
Outcome
suppression of bacterial wilte0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“suppression of bacterial wilt after the application of soil amendments (especially oyster shell powder) was attributed to the improved soil pH and increased bacterial richness and diversity”

✓ located verbatim in the source · abstract, characters 1326–1515 · show in text ↑
t0

“rhizosphere bacterial community of tobacco”

✓ located verbatim in the source · title, characters 41–83 · show in text ↑

botanical · disease · Nicotiana tabacum (tobacco)Positive and negative results

17 papers: 13 positive, 4 negative or no effect

12 papers in the same direction as this paper · 4 in the opposite direction

  1. no effect
  2. negative
  3. no effect

13 papers more in this group

See all 17 papers →

other · ecology: diversity · Nicotiana tabacum (tobacco)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

botanical · soil: chemistry · Nicotiana tabacum (tobacco)Results agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.