Paper · 2018 · Frontiers in Plant Science

A Larger Root System Is Coupled With Contrasting Expression Patterns of Phosphate and Nitrate Transporters in Foxtail Millet [Setaria italica (L.) Beauv.] Under Phosphate Limitation

Zeeshan Ahmad; Faisal Nadeem; Ruifeng Wang; et al.

12
claims
32
verbatim quotes
21
citations
2
research areas
✓
Open access · cc-by

Abstract

Foxtail millet [Setaria italic (L.) Beauv.], a widely cultivated food and fodder crop, develops a smaller root system while enlarges the root diameter facilitating nutrient transport under nitrogen limitation. How foxtail millet responds to phosphate limitation (LP) remains unaddressed. LP seedlings of the sequenced variety Yugu1 had significantly lower P concentrations in both shoots and roots and displayed higher levels of anthocyanin accumulation in leaves, indicating that the seedlings suffered from P limitation under hydroponic culture. One obvious and adaptive phenotype of LP plants was the larger root system mostly as the result of stimulation of lateral root proliferation in terms of the number, density, and length. Preferential biomass accumulation in the root under LP ensured carbon provision for root expansion and resulted in significant increases in the total and specific root length, which substantially extended the absorptive surface of P in the growth medium. Elevation of auxin and gibberellin concentrations might serve as an internal boost underpinning root architectural re-patterning under LP. Not just morphological adaptation, up-regulation of expression of SiPHT1;1 and SiPHT1;4 in roots and that of SiPHT1;2 in roots and shoots preconditioned adaptive enhancement of P uptake and translocation under LP. On the basis of a larger root system of LP plants, internal nitrogen surpluses occurred as indicated by higher concentrations of nitrogen in roots and dramatic increases in free amino acids in shoots and roots. Such nitrogen surplus ‘signals’ tended to switch down expression of nitrate transporters SiNRT2.1 and SiNAR2.1 in the root and that of SiNRT1.11 and SiNRT1.12 in the shoot to reduce nitrate mobilization towards or within the shoot. Together, our work provided new insights into adaption of a critical cereal crop to LP and its innate connection with nitrogen nutrition.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Phosphate limitation significantly lowered P concentrations in shoots and roots.

Taxon
Foxtail MilletSetaria italicat0
Material
Yugu1e0
Treatment
phosphate limitation (LP)e1
Outcome
P concentrations in both shoots and rootse0
Direction
lowere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“LP seedlings of the sequenced variety Yugu1 had significantly lower P concentrations in both shoots and roots”

✓ located verbatim in the source · abstract, characters 288–397 · show in text ↑
e1

“phosphate limitation (LP)”

✓ located verbatim in the source · abstract, characters 241–266 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Phosphate-limited seedlings accumulated more leaf anthocyanin.

Taxon
Foxtail MilletSetaria italicat0
Treatment
LPe1
Outcome
anthocyanin accumulation in leavese0
Direction
highere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“displayed higher levels of anthocyanin accumulation in leaves”

✓ located verbatim in the source · abstract, characters 402–463 · show in text ↑
e1

“LP seedlings”

✓ located verbatim in the source · abstract, characters 288–300 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Phosphate limitation produced a larger root system through more numerous, denser and longer lateral roots.

Taxon
Foxtail MilletSetaria italicat0
Treatment
LPe1
Outcome
lateral root proliferation in terms of the number, density, and lengthe0
Direction
stimulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“the larger root system mostly as the result of stimulation of lateral root proliferation in terms of the number, density, and length”

✓ located verbatim in the source · abstract, characters 600–732 · show in text ↑
e1

“One obvious and adaptive phenotype of LP plants”

✓ located verbatim in the source · abstract, characters 548–595 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Root biomass accumulation under LP supported root expansion.

Taxon
Foxtail MilletSetaria italicat0
Organ / stage
roote0
Treatment
LPe0
Outcome
carbon provision for root expansione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Preferential biomass accumulation in the root under LP ensured carbon provision for root expansion”

✓ located verbatim in the source · abstract, characters 734–832 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Total and specific root length increased significantly under phosphate limitation.

Taxon
Foxtail MilletSetaria italicat0
Treatment
LPe1
Outcome
total and specific root lengthe0
Direction
increasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“significant increases in the total and specific root length”

✓ located verbatim in the source · abstract, characters 849–908 · show in text ↑
e1

“root under LP ensured carbon provision”

✓ located verbatim in the source · abstract, characters 775–813 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Mechanismhypothesisoriginal resultpositivemeasured

Claim · model-written summary

Higher auxin and gibberellin concentrations may underpin root architecture changes under LP.

Taxon
Foxtail MilletSetaria italicat0
Treatment
LPe0
Compound
auxin and gibberelline0
Outcome
root architectural re-patterninge0
Qualifier
might serve as an internal booste0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Elevation of auxin and gibberellin concentrations might serve as an internal boost underpinning root architectural re-patterning under LP.”

✓ located verbatim in the source · abstract, characters 989–1127 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Root expression of SiPHT1;1 and SiPHT1;4 increased under LP.

Taxon
Foxtail MilletSetaria italicat0
Treatment
LPe1
Gene
SiPHT1;1 and SiPHT1;4e0
Outcome
expression of SiPHT1;1 and SiPHT1;4 in rootse0
Direction
up-regulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“up-regulation of expression of SiPHT1;1 and SiPHT1;4 in roots”

✓ located verbatim in the source · abstract, characters 1163–1224 · show in text ↑
e1

“translocation under LP”

✓ located verbatim in the source · abstract, characters 1318–1340 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SiPHT1;2 expression increased in roots and shoots under LP.

Taxon
Foxtail MilletSetaria italicat0
Treatment
LPe1
Gene
SiPHT1;2e0
Outcome
SiPHT1;2 in roots and shootse0
Direction
up-regulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“up-regulation of expression of SiPHT1;1 and SiPHT1;4 in roots and that of SiPHT1;2 in roots and shoots”

✓ located verbatim in the source · abstract, characters 1163–1265 · show in text ↑
e1

“translocation under LP”

✓ located verbatim in the source · abstract, characters 1318–1340 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Root nitrogen concentration was higher under phosphate limitation.

Taxon
Foxtail MilletSetaria italicat0
Treatment
LPe1
Outcome
concentrations of nitrogen in rootse0
Direction
highere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“higher concentrations of nitrogen in roots”

✓ located verbatim in the source · abstract, characters 1446–1488 · show in text ↑
e1

“larger root system of LP plants”

✓ located verbatim in the source · abstract, characters 1360–1391 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Free amino acids increased dramatically in shoots and roots under LP.

Taxon
Foxtail MilletSetaria italicat0
Treatment
LPe1
Outcome
free amino acids in shoots and rootse0
Direction
increasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“dramatic increases in free amino acids in shoots and roots”

✓ located verbatim in the source · abstract, characters 1493–1551 · show in text ↑
e1

“larger root system of LP plants”

✓ located verbatim in the source · abstract, characters 1360–1391 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Root SiNRT2.1 and SiNAR2.1 expression tended to decrease with nitrogen surplus signals.

Taxon
Foxtail MilletSetaria italicat0
Gene
SiNRT2.1 and SiNAR2.1e0
Outcome
expression of nitrate transporters SiNRT2.1 and SiNAR2.1 in the roote0
Direction
switch downe0
Qualifier
tended toe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“nitrogen surplus ‘signals’ tended to switch down expression of nitrate transporters SiNRT2.1 and SiNAR2.1 in the root”

✓ located verbatim in the source · abstract, characters 1558–1675 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Shoot SiNRT1.11 and SiNRT1.12 expression tended to decrease with nitrogen surplus signals.

Taxon
Foxtail MilletSetaria italicat0
Gene
SiNRT1.11 and SiNRT1.12e0
Outcome
SiNRT1.11 and SiNRT1.12 in the shoote0
Direction
switch downe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Such nitrogen surplus ‘signals’ tended to switch down expression of nitrate transporters SiNRT2.1 and SiNAR2.1 in the root and that of SiNRT1.11 and SiNRT1.12 in the shoot”

✓ located verbatim in the source · abstract, characters 1553–1724 · show in text ↑
t0

“Foxtail Millet”

✓ located verbatim in the source · title, characters 110–124 · show in text ↑

phosphorus · molecular: expression · Setaria italica (foxtail millet)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

phosphorus · growth · Setaria italica (foxtail millet)Results agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.