Paper · 2018 · International Journal of Molecular Sciences

Splice Variants of the Castor WRI1 Gene Upregulate Fatty Acid and Oil Biosynthesis When Expressed in Tobacco Leaves

Xia-Jie Ji; Xue Mao; Qing-Ting Hao; et al.

12
claims
23
verbatim quotes
78
citations
3
research areas
✓
Open access · cc-by

Abstract

The plant-specific WRINKLED1 (WRI1) is a member of the AP2/EREBP class of transcription factors that positively regulate oil biosynthesis in plant tissues. Limited information is available for the role of WRI1 in oil biosynthesis in castor bean (Ricinus connunis L.), an important industrial oil crop. Here, we report the identification of two alternatively spliced transcripts of RcWRI1, designated as RcWRI1-A and RcWRI1-B. The open reading frames of RcWRI1-A (1341 bp) and RcWRI1-B (1332 bp) differ by a stretch of 9 bp, such that the predicted RcWRI1-B lacks the three amino acid residues “VYL” that are present in RcWRI1-A. The RcWRI1-A transcript is present in flowers, leaves, pericarps and developing seeds, while the RcWRI1-B mRNA is only detectable in developing seeds. When the two isoforms were individually introduced into an Arabidopsis wri1-1 loss-of-function mutant, total fatty acid content was almost restored to the wild-type level, and the percentage of the wrinkled seeds was largely reduced in the transgenic lines relative to the wri1-1 mutant line. Transient expression of each RcWRI1 splice isoform in N. benthamiana leaves upregulated the expression of the WRI1 target genes, and consequently increased the oil content by 4.3–4.9 fold when compared with the controls, and RcWRI1-B appeared to be more active than RcWRI1-A. Both RcWRI1-A and RcWRI1-B can be used as a key transcriptional regulator to enhance fatty acid and oil biosynthesis in leafy biomass.

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Claims 12

Observationobservedoriginal resultmeasured

Claim · model-written summary

Two alternatively spliced RcWRI1 transcripts, RcWRI1-A and RcWRI1-B, were identified in castor.

Taxon
castor beanRicinus communise0
Gene
RcWRI1e1
Outcome
two alternatively spliced transcriptse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ricinus communis
Ricinus communis · TaxonDvellakat · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“castor bean (Ricinus connunis L.)”

✓ located verbatim in the source · abstract, characters 233–266 · show in text ↑
e1

“identification of two alternatively spliced transcripts of RcWRI1, designated as RcWRI1-A and RcWRI1-B”

✓ located verbatim in the source · abstract, characters 322–424 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

RcWRI1-B lacks the three VYL residues present in RcWRI1-A.

Taxon
castor beanRicinus communise0
Gene
RcWRI1-Be1
Outcome
lacks the three amino acid residues “VYL”e1
Value
9 bpe1
Comparator
RcWRI1-Ae1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ricinus communis
Ricinus communis · TaxonDvellakat · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“castor bean (Ricinus connunis L.)”

✓ located verbatim in the source · abstract, characters 233–266 · show in text ↑
e1

“The open reading frames of RcWRI1-A (1341 bp) and RcWRI1-B (1332 bp) differ by a stretch of 9 bp, such that the predicted RcWRI1-B lacks the three amino acid residues “VYL” that are present in RcWRI1-A.”

✓ located verbatim in the source · abstract, characters 426–628 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

RcWRI1-A transcript was present in flowers, leaves, pericarps and developing seeds.

Taxon
castor beanRicinus communise0
Gene
RcWRI1-Ae1
Outcome
present in flowers, leaves, pericarps and developing seedse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ricinus communis
Ricinus communis · TaxonDvellakat · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“castor bean (Ricinus connunis L.)”

✓ located verbatim in the source · abstract, characters 233–266 · show in text ↑
e1

“The RcWRI1-A transcript is present in flowers, leaves, pericarps and developing seeds”

✓ located verbatim in the source · abstract, characters 629–714 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

RcWRI1-B mRNA was detectable only in developing seeds.

Taxon
castor beanRicinus communise0
Gene
RcWRI1-Be1
Outcome
only detectable in developing seedse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ricinus communis
Ricinus communis · TaxonDvellakat · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“castor bean (Ricinus connunis L.)”

✓ located verbatim in the source · abstract, characters 233–266 · show in text ↑
e1

“the RcWRI1-B mRNA is only detectable in developing seeds”

✓ located verbatim in the source · abstract, characters 722–778 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Introducing RcWRI1-A into the Arabidopsis wri1-1 mutant nearly restored total fatty acid content to wild-type levels.

Taxon
ArabidopsisArabidopsise0
Material
wri1-1 loss-of-function mutante0
Treatment
introducede1
Gene
RcWRI1-Ae2
Outcome
total fatty acid contente1
Direction
restorede1
Comparator
wild-type levele1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis wri1-1 loss-of-function mutant”

✓ located verbatim in the source · abstract, characters 839–881 · show in text ↑
e1

“When the two isoforms were individually introduced into an Arabidopsis wri1-1 loss-of-function mutant, total fatty acid content was almost restored to the wild-type level”

✓ located verbatim in the source · abstract, characters 780–950 · show in text ↑
e2

“RcWRI1-A transcript”

✓ located verbatim in the source · abstract, characters 633–652 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Introducing RcWRI1-B into the Arabidopsis wri1-1 mutant nearly restored total fatty acid content to wild-type levels.

Taxon
ArabidopsisArabidopsise0
Material
wri1-1 loss-of-function mutante0
Treatment
introducede1
Gene
RcWRI1-Be2
Outcome
total fatty acid contente1
Direction
restorede1
Comparator
wild-type levele1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis wri1-1 loss-of-function mutant”

✓ located verbatim in the source · abstract, characters 839–881 · show in text ↑
e1

“When the two isoforms were individually introduced into an Arabidopsis wri1-1 loss-of-function mutant, total fatty acid content was almost restored to the wild-type level”

✓ located verbatim in the source · abstract, characters 780–950 · show in text ↑
e2

“RcWRI1-B mRNA”

✓ located verbatim in the source · abstract, characters 726–739 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Introducing the RcWRI1 isoforms reduced wrinkled-seed percentage relative to the wri1-1 mutant line.

Taxon
ArabidopsisArabidopsise0
Treatment
transgenic linese1
Outcome
percentage of the wrinkled seedse1
Direction
reducede1
Comparator
wri1-1 mutant linee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis wri1-1 loss-of-function mutant”

✓ located verbatim in the source · abstract, characters 839–881 · show in text ↑
e1

“the percentage of the wrinkled seeds was largely reduced in the transgenic lines relative to the wri1-1 mutant line”

✓ located verbatim in the source · abstract, characters 956–1071 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Transient RcWRI1-A expression upregulated WRI1 target genes in N. benthamiana leaves.

Taxon
N. benthamianae0
Organ / stage
leavese0
Treatment
Transient expression of each RcWRI1 splice isoforme0
Gene
WRI1 target genese0
Outcome
expression of the WRI1 target genese0
Direction
upregulatede0

Not reportedComparator

Verbatim

e0

“Transient expression of each RcWRI1 splice isoform in N. benthamiana leaves upregulated the expression of the WRI1 target genes”

✓ located verbatim in the source · abstract, characters 1073–1200 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Transient RcWRI1-B expression upregulated WRI1 target genes in N. benthamiana leaves.

Taxon
N. benthamianae0
Organ / stage
leavese0
Treatment
Transient expression of each RcWRI1 splice isoforme0
Gene
WRI1 target genese0
Outcome
expression of the WRI1 target genese0
Direction
upregulatede0

Not reportedComparator

Verbatim

e0

“Transient expression of each RcWRI1 splice isoform in N. benthamiana leaves upregulated the expression of the WRI1 target genes”

✓ located verbatim in the source · abstract, characters 1073–1200 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Transient expression of each RcWRI1 isoform increased tobacco leaf oil content 4.3–4.9 fold over controls.

Taxon
N. benthamianae0
Organ / stage
leavese0
Treatment
Transient expression of each RcWRI1 splice isoforme0
Outcome
oil contente0
Direction
increasede0
Value
4.3–4.9 folde0
Comparator
the controlse0

Verbatim

e0

“Transient expression of each RcWRI1 splice isoform in N. benthamiana leaves upregulated the expression of the WRI1 target genes, and consequently increased the oil content by 4.3–4.9 fold when compared with the controls”

✓ located verbatim in the source · abstract, characters 1073–1292 · show in text ↑
Observationauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

RcWRI1-B appeared more active than RcWRI1-A.

Taxon
castor beanRicinus communise0
Gene
RcWRI1-Be1
Outcome
more activee1
Direction
more activee1
Comparator
RcWRI1-Ae1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ricinus communis
Ricinus communis · TaxonDvellakat · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“castor bean (Ricinus connunis L.)”

✓ located verbatim in the source · abstract, characters 233–266 · show in text ↑
e1

“RcWRI1-B appeared to be more active than RcWRI1-A”

✓ located verbatim in the source · abstract, characters 1298–1347 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors propose RcWRI1-A and RcWRI1-B as regulators to enhance fatty acid and oil biosynthesis in leafy biomass.

Taxon
castor beanRicinus communise0
Gene
RcWRI1-A and RcWRI1-Be1
Outcome
can be used as a key transcriptional regulator to enhance fatty acid and oil biosynthesis in leafy biomasse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ricinus communis
Ricinus communis · TaxonDvellakat · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“castor bean (Ricinus connunis L.)”

✓ located verbatim in the source · abstract, characters 233–266 · show in text ↑
e1

“Both RcWRI1-A and RcWRI1-B can be used as a key transcriptional regulator to enhance fatty acid and oil biosynthesis in leafy biomass.”

✓ located verbatim in the source · abstract, characters 1349–1483 · show in text ↑

transgenic · molecular: expression · Nicotiana benthamianaPositive and negative results

29 papers: 20 positive, 9 negative or no effect

19 papers in the same direction as this paper · 9 in the opposite direction

  1. negative
  2. negative
  3. no effect

25 papers more in this group

See all 29 papers →

transgenic · quality: oil · Nicotiana benthamianaResults agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.