Paper · 2016 · PLoS ONE

Cloning and Functional Analysis of the Promoter of an Ascorbate Oxidase Gene from Gossypium hirsutum

Shan Xin; Chengcheng Tao; Hongbin Li

8
claims
16
verbatim quotes
27
citations
2
research areas
✓
Open access · cc-by

Abstract

Apoplastic ascorbate oxidase (AO) plays significant roles in plant cell growth. However, the mechanism of underlying the transcriptional regulation of AO in Gossypium hirsutum remains unclear. Here, we obtained a 1,920-bp promoter sequence from the Gossypium hirsutum ascorbate oxidase (GhAO1) gene, and this GhAO1 promoter included a number of known cis-elements. Promoter activity analysis in overexpressing pGhAO1::GFP-GUS tobacco (Nicotiana benthamiana) showed that the GhAO1 promoter exhibited high activity, driving strong reporter gene expression in tobacco trichomes, leaves and roots. Promoter 5'-deletion analysis demonstrated that truncated GhAO1 promoters with serial 5'-end deletions had different GUS activities. A 360-bp fragment was sufficient to activate GUS expression. The P-1040 region had less GUS activity than the P-720 region, suggesting that the 320-bp region from nucleotide -720 to -1040 might include a cis-element acting as a silencer. Interestingly, an auxin-responsive cis-acting element (TGA-element) was uncovered in the promoter. To analyze the function of the TGA-element, tobacco leaves transformed with promoters with different 5' truncations were treated with indole-3-acetic acid (IAA). Tobacco leaves transformed with the promoter regions containing the TGA-element showed significantly increased GUS activity after IAA treatment, implying that the fragment spanning nucleotides -1760 to -1600 (which includes the TGA-element) might be a key component for IAA responsiveness. Analyses of the AO promoter region and AO expression pattern in Gossypium arboreum (Ga, diploid cotton with an AA genome), Gossypium raimondii (Gr, diploid cotton with a DD genome) and Gossypium hirsutum (Gh, tetraploid cotton with an AADD genome) indicated that AO promoter activation and AO transcription were detected together only in D genome/sub-genome (Gr and Gh) cotton. Taken together, these results suggest that the 1,920-bp GhAO1 promoter is a functional sequence with a potential effect on fiber cell development, mediated by TGA-element containing sequences, via the auxin-signaling pathway.

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Claims 8

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

A 1,920-bp GhAO1 promoter sequence containing known cis-elements was obtained.

Taxon
Gossypium hirsutumGossypium hirsutumt0
Gene
GhAO1e0
Outcome
promoter sequencee0
Value
1,920-bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Gossypium hirsutum”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e0

“we obtained a 1,920-bp promoter sequence from the Gossypium hirsutum ascorbate oxidase (GhAO1) gene, and this GhAO1 promoter included a number of known cis-elements”

✓ located verbatim in the source · abstract, characters 199–363 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The GhAO1 promoter drove strong reporter expression in tobacco trichomes, leaves and roots.

Organ / stage
trichomes, leaves and rootse0
Gene
GhAO1e0
Outcome
reporter gene expressione0
Direction
stronge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

t0

“Gossypium hirsutum”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e0

“the GhAO1 promoter exhibited high activity, driving strong reporter gene expression in tobacco trichomes, leaves and roots”

✓ located verbatim in the source · abstract, characters 470–592 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Serial 5-prime truncations of GhAO1 differed in GUS activity.

Taxon
Gossypium hirsutumGossypium hirsutumt0
Gene
GhAO1e0
Outcome
GUS activitiese0
Direction
differente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Gossypium hirsutum”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e0

“truncated GhAO1 promoters with serial 5'-end deletions had different GUS activities”

✓ located verbatim in the source · abstract, characters 642–725 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A 360-bp promoter fragment activated GUS expression.

Taxon
Gossypium hirsutumGossypium hirsutumt0
Outcome
GUS expressione0
Value
360-bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Gossypium hirsutum”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e0

“A 360-bp fragment was sufficient to activate GUS expression.”

✓ located verbatim in the source · abstract, characters 727–787 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

P-1040 had lower GUS activity than P-720.

Taxon
Gossypium hirsutumGossypium hirsutumt0
Material
P-1040 regione0
Outcome
GUS activitye0
Direction
lesse0
Comparator
P-720 regione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Gossypium hirsutum”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e0

“The P-1040 region had less GUS activity than the P-720 region”

✓ located verbatim in the source · abstract, characters 788–849 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A TGA-element was identified in the promoter.

Taxon
Gossypium hirsutumGossypium hirsutumt0
Gene
TGA-elemente0
Outcome
auxin-responsive cis-acting elemente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Gossypium hirsutum”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e0

“an auxin-responsive cis-acting element (TGA-element) was uncovered in the promoter”

✓ located verbatim in the source · abstract, characters 980–1062 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

IAA treatment significantly increased GUS activity in tobacco leaves carrying TGA-element promoter regions.

Organ / stage
leavese0
Treatment
IAA treatmente0
Gene
TGA-elemente0
Outcome
GUS activitye0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

t0

“Gossypium hirsutum”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e0

“Tobacco leaves transformed with the promoter regions containing the TGA-element showed significantly increased GUS activity after IAA treatment”

✓ located verbatim in the source · abstract, characters 1226–1369 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AO promoter activation and transcription were detected together only in D genome/sub-genome Gr and Gh cotton.

Material
D genome/sub-genome (Gr and Gh)e0
Gene
AOe0
Outcome
AO promoter activation and AO transcriptione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Gossypium hirsutum”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e0

“AO promoter activation and AO transcription were detected together only in D genome/sub-genome (Gr and Gh) cotton”

✓ located verbatim in the source · abstract, characters 1779–1892 · show in text ↑

indole-3-acetic acid · molecular: expression · Nicotiana tabacum (tobacco)Positive and negative results

7 papers: 6 positive, 1 negative or no effect

5 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

3 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.