Paper · 2011 · Journal of Nuclear Agricultural Sciences

FULL-LENGTH cDNA CLONING AND ANALYSIS OF GHBI-1 FROM UPLAND COTTON (Gossypium hirsutum L.)

Zhang Jun

10
claims
20
verbatim quotes
0
citations
2
research areas
—
Not open access

Abstract

In higher plants and animals,BI-1(Bax inhibitor-1) is the inhibitor of apoptosis.Overexpression of BI-1 in plant can improve the tolerance to cell death induced by biological and abiotic stress.Using known BI-1 gene sequences of upland cotton,two full-length cDNAs of GhBI gene,GhBI-1a and GhBI-1b,were amplified by RACE technology.The homology of these two genes in nucleotides was 86% and was 87% in encoded protein.GhBI-1a has six transmembrane regions while GhBI-1b has seven transmembrane regions.GhBI-1a and GhBI-1b were expressed both in roots and leaves.GhBI-1b was induced by Verticillium dahliae,but GhBI-1a had no significant difference after inoculation.Homologous analysis suggested that GhBI-1a located in subgenome D and GhBI-1b located in subgenome A of the allotetroploid cotton genome.Cloning of these two genes would be benefited to further study the biotic and abiotic stress adaptation mechanisms of upland cotton and thus to improve the tolerance in cotton breeding.

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Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

Two full-length GhBI-1a and GhBI-1b cDNAs were cloned from Gossypium hirsutum

Taxon
Gossypium hirsutumGossypium hirsutumt0
Gene
GhBI-1a and GhBI-1be0
Outcome
full-length cDNAse0
Value
twoe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“UPLAND COTTON (Gossypium hirsutum L.)”

✓ located verbatim in the source · title, characters 53–90 · show in text ↑
e0

“Using known BI-1 gene sequences of upland cotton,two full-length cDNAs of GhBI gene,GhBI-1a and GhBI-1b,were amplified by RACE technology”

✓ located verbatim in the source · abstract, characters 194–331 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GhBI-1a and GhBI-1b share 86% nucleotide homology

Taxon
Gossypium hirsutumGossypium hirsutumt0
Outcome
homology of these two genes in nucleotidese1
Value
86%e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“UPLAND COTTON (Gossypium hirsutum L.)”

✓ located verbatim in the source · title, characters 53–90 · show in text ↑
e1

“The homology of these two genes in nucleotides was 86% and was 87% in encoded protein”

✓ located verbatim in the source · abstract, characters 332–417 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GhBI-1a and GhBI-1b share 87% encoded protein homology

Taxon
Gossypium hirsutumGossypium hirsutumt0
Outcome
homologye1
Value
87%e1
Qualifier
in encoded proteine1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“UPLAND COTTON (Gossypium hirsutum L.)”

✓ located verbatim in the source · title, characters 53–90 · show in text ↑
e1

“The homology of these two genes in nucleotides was 86% and was 87% in encoded protein”

✓ located verbatim in the source · abstract, characters 332–417 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GhBI-1a has six transmembrane regions

Taxon
Gossypium hirsutumGossypium hirsutumt0
Gene
GhBI-1ae2
Outcome
transmembrane regionse2
Value
sixe2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“UPLAND COTTON (Gossypium hirsutum L.)”

✓ located verbatim in the source · title, characters 53–90 · show in text ↑
e2

“GhBI-1a has six transmembrane regions while GhBI-1b has seven transmembrane regions”

✓ located verbatim in the source · abstract, characters 418–501 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GhBI-1b has seven transmembrane regions

Taxon
Gossypium hirsutumGossypium hirsutumt0
Gene
GhBI-1be2
Outcome
transmembrane regionse2
Value
sevene2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“UPLAND COTTON (Gossypium hirsutum L.)”

✓ located verbatim in the source · title, characters 53–90 · show in text ↑
e2

“GhBI-1a has six transmembrane regions while GhBI-1b has seven transmembrane regions”

✓ located verbatim in the source · abstract, characters 418–501 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GhBI-1a and GhBI-1b are expressed in roots and leaves

Taxon
Gossypium hirsutumGossypium hirsutumt0
Organ / stage
roots and leavese3
Gene
GhBI-1a and GhBI-1be3
Outcome
expressede3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“UPLAND COTTON (Gossypium hirsutum L.)”

✓ located verbatim in the source · title, characters 53–90 · show in text ↑
e3

“GhBI-1a and GhBI-1b were expressed both in roots and leaves”

✓ located verbatim in the source · abstract, characters 502–561 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Verticillium dahliae inoculation induced GhBI-1b expression in Gossypium hirsutum

Taxon
Gossypium hirsutumGossypium hirsutumt0
Treatment
inoculatione4
Interactor
Verticillium dahliaeVerticillium dahliaee4pathogen
Gene
GhBI-1be4
Outcome
GhBI-1be4
Direction
inducede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗
Verticillium dahliae
Verticillium dahliae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“UPLAND COTTON (Gossypium hirsutum L.)”

✓ located verbatim in the source · title, characters 53–90 · show in text ↑
e4

“GhBI-1b was induced by Verticillium dahliae,but GhBI-1a had no significant difference after inoculation”

✓ located verbatim in the source · abstract, characters 562–665 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

GhBI-1a expression showed no significant difference after Verticillium dahliae inoculation

Taxon
Gossypium hirsutumGossypium hirsutumt0
Treatment
inoculatione4
Interactor
Verticillium dahliaeVerticillium dahliaee4pathogen
Gene
GhBI-1ae4
Outcome
GhBI-1ae4
Direction
no significant differencee4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗
Verticillium dahliae
Verticillium dahliae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“UPLAND COTTON (Gossypium hirsutum L.)”

✓ located verbatim in the source · title, characters 53–90 · show in text ↑
e4

“GhBI-1b was induced by Verticillium dahliae,but GhBI-1a had no significant difference after inoculation”

✓ located verbatim in the source · abstract, characters 562–665 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

GhBI-1a is located in subgenome D of the allotetraploid cotton genome

Taxon
Gossypium hirsutumGossypium hirsutumt0
Gene
GhBI-1ae5
Outcome
located in subgenome De5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“UPLAND COTTON (Gossypium hirsutum L.)”

✓ located verbatim in the source · title, characters 53–90 · show in text ↑
e5

“Homologous analysis suggested that GhBI-1a located in subgenome D and GhBI-1b located in subgenome A of the allotetroploid cotton genome”

✓ located verbatim in the source · abstract, characters 666–802 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

GhBI-1b is located in subgenome A of the allotetraploid cotton genome

Taxon
Gossypium hirsutumGossypium hirsutumt0
Gene
GhBI-1be5
Outcome
located in subgenome Ae5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“UPLAND COTTON (Gossypium hirsutum L.)”

✓ located verbatim in the source · title, characters 53–90 · show in text ↑
e5

“Homologous analysis suggested that GhBI-1a located in subgenome D and GhBI-1b located in subgenome A of the allotetroploid cotton genome”

✓ located verbatim in the source · abstract, characters 666–802 · show in text ↑

inoculation · Verticillium dahliae · Gossypium hirsutum (cotton)Positive and negative results

7 papers: 6 positive, 1 negative or no effect

6 in the opposite direction

  1. positive
  2. positive
  3. positive

3 papers more in this group

See all 7 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.