Paper · 2015 · TAP CHI SINH HOC

Molecular characterization of response to arsenic in rice (Oryza sativa L.)

Trinh Ngoc Nam; Le Hong Thia; Nguyen Vuong Tuan

8
claims
16
verbatim quotes
0
citations
2
research areas
✓
Open access

Abstract

Arsenic (As) is classified as one of toxic metalloids, that directly affects to most plants. Moreover, As is also a human carcinogen due to drinking As-contaminated groundwater or eating plant food including rice cultivated in polluted areas. The effect of As on rice growth was established, but the precised mechanism of rice response to As remains to be elucidated. This study investigated the biochemical and molecular changes in roots of rice seedlings under As stress. A 100 mM As(III) solution strongly inhibited the growth and induced reactive oxygen species (ROS) production in rice roots. Using ICP-MS, we found As content in rice roots increased with increasing concentration of As solution treatment. Semi-quantitative RT-PCR analysis revealed that some ROS-related gene, protein kinase-related genes, signal transduction-related genes, transcription factor-related genes and auxin synthesis-related gene were up-regulated during As stress. However, cell cytokinesis-related gene was down-regulated. Polyacrylamide gel electrophoresis and activity-gel assay showed that enzymatic activity of superoxide dismutase (SOD), catalase (CAT) and peroxidase (POD) were strongly induced under As stress, as an antioxidant defense system. In addition, the contrileuted to elucidating increase of proline content, function as radical scavenger and cellular redox potential buffer, was found in As treated rice roots. Our findings more or less on the biochemical and molecular mechanism in response to As stress in plants.

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Claims 8

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

A 100 mM As(III) solution strongly inhibited rice root growth.

Organ / stage
rice rootse1
Treatment
A 100 mM As(III) solutione1
Outcome
growthe1
Direction
inhibitede1
Qualifier
stronglye1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“roots of rice seedlings under As stress”

✓ located verbatim in the source · abstract, characters 433–472 · show in text ↑
e1

“A 100 mM As(III) solution strongly inhibited the growth and induced reactive oxygen species (ROS) production in rice roots”

✓ located verbatim in the source · abstract, characters 474–596 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

A 100 mM As(III) solution induced reactive oxygen species production in rice roots.

Organ / stage
rice rootse1
Treatment
A 100 mM As(III) solutione1
Outcome
reactive oxygen species (ROS) productione1
Direction
inducede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“A 100 mM As(III) solution strongly inhibited the growth and induced reactive oxygen species (ROS) production in rice roots”

✓ located verbatim in the source · abstract, characters 474–596 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Increasing As solution concentration increased As content in rice roots.

Organ / stage
rice rootse2
Treatment
increasing concentration of As solution treatmente2
Outcome
As contente2
Direction
increasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e2

“we found As content in rice roots increased with increasing concentration of As solution treatment”

✓ located verbatim in the source · abstract, characters 612–710 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

During As stress, ROS-related, protein kinase-related and signal transduction-related genes were up-regulated in rice roots.

Treatment
As stresse4
Gene
ROS-related gene, protein kinase-related genes, signal transduction-related genese3
Outcome
ROS-related gene, protein kinase-related genes, signal transduction-related genese3
Direction
up-regulatede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“response to arsenic in rice (Oryza sativa L.)”

✓ located verbatim in the source · title, characters 30–75 · show in text ↑
e3

“some ROS-related gene, protein kinase-related genes, signal transduction-related genes”

✓ located verbatim in the source · abstract, characters 760–846 · show in text ↑
e4

“were up-regulated during As stress”

✓ located verbatim in the source · abstract, characters 916–950 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

During As stress, transcription factor-related and auxin synthesis-related genes were up-regulated in rice roots.

Treatment
As stresse4
Gene
transcription factor-related genes and auxin synthesis-related genee5
Outcome
transcription factor-related genes and auxin synthesis-related genee5
Direction
up-regulatede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“response to arsenic in rice (Oryza sativa L.)”

✓ located verbatim in the source · title, characters 30–75 · show in text ↑
e4

“were up-regulated during As stress”

✓ located verbatim in the source · abstract, characters 916–950 · show in text ↑
e5

“transcription factor-related genes and auxin synthesis-related gene”

✓ located verbatim in the source · abstract, characters 848–915 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Under As stress, the cell cytokinesis-related gene was down-regulated in rice.

Treatment
As stresse4
Gene
cell cytokinesis-related genee6
Outcome
cell cytokinesis-related genee6
Direction
down-regulatede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“response to arsenic in rice (Oryza sativa L.)”

✓ located verbatim in the source · title, characters 30–75 · show in text ↑
e4

“were up-regulated during As stress”

✓ located verbatim in the source · abstract, characters 916–950 · show in text ↑
e6

“cell cytokinesis-related gene was down-regulated”

✓ located verbatim in the source · abstract, characters 961–1009 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Under As stress, superoxide dismutase, catalase and peroxidase enzymatic activity was strongly induced in rice.

Treatment
As stresse7
Gene
superoxide dismutase (SOD), catalase (CAT) and peroxidase (POD)e7
Outcome
enzymatic activitye7
Direction
strongly inducede7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“response to arsenic in rice (Oryza sativa L.)”

✓ located verbatim in the source · title, characters 30–75 · show in text ↑
e7

“enzymatic activity of superoxide dismutase (SOD), catalase (CAT) and peroxidase (POD) were strongly induced under As stress”

✓ located verbatim in the source · abstract, characters 1081–1204 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Proline content increased in arsenic-treated rice roots.

Organ / stage
rice rootse1
Treatment
As treatede1
Outcome
proline contente1
Direction
increasee1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“increase of proline content, function as radical scavenger and cellular redox potential buffer, was found in As treated rice roots”

✓ located verbatim in the source · abstract, characters 1285–1415 · show in text ↑

arsenic atom · physiology: enzyme activity · Oryza sativa (rice)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

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arsenic atom · growth · Oryza sativa (rice)Positive and negative results

32 papers: 7 positive, 25 negative or no effect

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heavy metal · physiology: enzyme activity · Oryza sativa (rice)Positive and negative results

6 papers: 2 positive, 4 negative or no effect

1 paper in the same direction as this paper · 4 in the opposite direction

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.