Paper · 1998 · Plant and Cell Physiology

Isolation and Characterization of a Water Stress-Specific Genomic Gene, pwsi 18, from Rice

N. Joshee; H. Kisaka; Y. Kitagawa

6
claims
12
verbatim quotes
47
citations
2
research areas
—
Not open access

Abstract

One of the water stress-specific cDNA clones of rice characterised previously, wsi18, was selected for further study. The wsi18 gene can be induced by water stress conditions such as mannitol, NaCl, and dryness, but not by ABA, cold, or heat. A genomic clone for wsi18, pwsi18, contained about 1.7 kbp of the 5' upstream sequence, two introns, and the full coding sequence. The 5'-upstream sequence of pwsi18 contained putative cis-acting elements, namely an ABA-responsive element (ABRE), three G-boxes, three E-boxes, a MEF-2 sequence, four direct and two inverted repeats, and four sequences similar to DRE, which is involved in the dehydration response of Arabidopsis genes. The gusA reporter gene under the control of the pwsi18 promoter showed transient expression in response to water stress. Deletion of the downstream DRE-like sequence between the distal G-boxes-2 and -3 resulted in rather low GUS expression.

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Claims 6

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

wsi18 was induced by mannitol, NaCl and dryness.

Treatment
water stress conditions such as mannitol, NaCl, and drynesse0
Gene
wsi18e0
Outcome
inducede0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The wsi18 gene can be induced by water stress conditions such as mannitol, NaCl, and dryness”

✓ located verbatim in the source · abstract, characters 118–210 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 86–90 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

wsi18 was not induced by ABA, cold or heat.

Treatment
ABA, cold, or heate0
Outcome
not by ABA, cold, or heate0
Direction
no_changeinferrede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“but not by ABA, cold, or heat”

✓ located verbatim in the source · abstract, characters 212–241 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 86–90 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The pwsi18 genomic clone contains upstream sequence, two introns and a full coding sequence.

Gene
pwsi18e0
Outcome
5' upstream sequence, two introns, and the full coding sequencee0
Value
1.7 kbpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“A genomic clone for wsi18, pwsi18, contained about 1.7 kbp of the 5' upstream sequence, two introns, and the full coding sequence”

✓ located verbatim in the source · abstract, characters 243–372 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 86–90 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The pwsi18 upstream region contained multiple putative cis elements.

Gene
pwsi18e0
Outcome
putative cis-acting elementse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The 5'-upstream sequence of pwsi18 contained putative cis-acting elements, namely an ABA-responsive element (ABRE), three G-boxes, three E-boxes, a MEF-2 sequence, four direct and two inverted repeats, and four sequences similar to DRE”

✓ located verbatim in the source · abstract, characters 374–609 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 86–90 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The pwsi18 promoter drove transient gusA expression under water stress.

Treatment
water stresse0
Gene
gusAe0
Outcome
transient expressione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The gusA reporter gene under the control of the pwsi18 promoter showed transient expression in response to water stress”

✓ located verbatim in the source · abstract, characters 679–798 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 86–90 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Deleting the downstream DRE-like sequence yielded low GUS expression.

Treatment
Deletion of the downstream DRE-like sequencee0
Gene
GUSe0
Outcome
GUS expressione0
Direction
lowe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Deletion of the downstream DRE-like sequence between the distal G-boxes-2 and -3 resulted in rather low GUS expression”

✓ located verbatim in the source · abstract, characters 800–918 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 86–90 · show in text ↑

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7 papers in the same direction as this paper · 17 in the opposite direction

  1. positive
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43 papers: 13 positive, 30 negative or no effect

29 papers in the same direction as this paper · 13 in the opposite direction

  1. positive
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21 papers: 11 positive, 10 negative or no effect

9 papers in the same direction as this paper · 11 in the opposite direction

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drought · molecular: expression · Oryza sativa (rice)Positive and negative results

80 papers: 58 positive, 22 negative or no effect

57 papers in the same direction as this paper · 22 in the opposite direction

  1. negative
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loss of function · molecular: expression · Oryza sativa (rice)Positive and negative results

98 papers: 31 positive, 67 negative or no effect

66 papers in the same direction as this paper · 31 in the opposite direction

  1. positive
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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.