Paper · 2002 · PLANT PHYSIOLOGY

An Arabidopsis Mutant Defective in Jasmonate Response Is Allelic to the Auxin-Signaling Mutant axr1

Iskender Tiryaki; Paul E. Staswick

19
claims
38
verbatim quotes
268
citations
3
research areas
✓
Open access

Abstract

A screen for Arabidopsis mutants that were insensitive to methyl jasmonate (MeJA) in an assay for seedling root growth yielded only alleles of previously isolated mutants jar1 and coi1, with one exception. Mapping of the locus and morphological characterization of the new mutant suggested it might be allelic to axr1, which had not previously been reported to show resistance to MeJA. The F(1) from a cross of the new mutant with axr1-3 did not show complementation, confirming that these are the same genes. The new allele is called axr1-24. In addition to MeJA and indole-3-acetic acid (IAA), axr1-24 had decreased sensitivity to 1-aminocyclopropane-1-carboxylic acid, 6-benzylamino-purine, epi-brassinolide, and abscisic acid. Both axr1-24 and the previously characterized axr1-3 allele were shown to be susceptible to the opportunistic pathogen Pythium irregulare, a trait found in other jasmonate response mutants, including jar1-1. The double mutant jar1-1/axr1-3 was more resistant to inhibition of root growth by MeJA and was more susceptible to P. irregulare infection than either single mutant, suggesting these genes might act in independent response pathways. In contrast, resistance to IAA in the double mutant was not different from axr1-3. Northern-blot analysis showed that IAA induced the jasmonate-responsive lipoxygenase 2, AOS, and AtVSP gene transcripts and induction was strongly impaired in axr1-3. However, transcript induction by MeJA was only minimally affected in axr1-3. This study demonstrates that in addition to auxin signaling, the AXR1 locus is involved in MeJA response, providing a mechanistic link between jasmonate and auxin-signaling pathways.

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Claims 19

Observationobservedoriginal resultmeasured

Claim · model-written summary

The methyl jasmonate insensitivity screen yielded jar1 and coi1 alleles and one exceptional mutant.

Taxon
ArabidopsisArabidopsist0
Gene
jar1 and coi1e0
Outcome
alleles of previously isolated mutants jar1 and coi1, with one exceptione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A screen for Arabidopsis mutants that were insensitive to methyl jasmonate (MeJA) in an assay for seedling root growth yielded only alleles of previously isolated mutants jar1 and coi1, with one exception.”

✓ located verbatim in the source · abstract, characters 0–205 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The new mutant did not complement axr1-3, establishing allelism.

Taxon
ArabidopsisArabidopsist0
Gene
axr1-3e0
Outcome
did not show complementatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The F(1) from a cross of the new mutant with axr1-3 did not show complementation, confirming that these are the same genes.”

✓ located verbatim in the source · abstract, characters 386–509 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The new allele was designated axr1-24.

Taxon
ArabidopsisArabidopsist0
Gene
axr1-24e0
Outcome
axr1-24e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The new allele is called axr1-24.”

✓ located verbatim in the source · abstract, characters 510–543 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

axr1-24 showed decreased sensitivity to MeJA.

Taxon
ArabidopsisArabidopsist0
Treatment
MeJAe0
Gene
axr1-24e0
Outcome
decreased sensitivitye0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In addition to MeJA and indole-3-acetic acid (IAA), axr1-24 had decreased sensitivity to 1-aminocyclopropane-1-carboxylic acid, 6-benzylamino-purine, epi-brassinolide, and abscisic acid.”

✓ located verbatim in the source · abstract, characters 544–730 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

axr1-24 showed decreased sensitivity to indole-3-acetic acid (IAA).

Taxon
ArabidopsisArabidopsist0
Treatment
indole-3-acetic acid (IAA)e0
Gene
axr1-24e0
Outcome
decreased sensitivitye0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In addition to MeJA and indole-3-acetic acid (IAA), axr1-24 had decreased sensitivity to 1-aminocyclopropane-1-carboxylic acid, 6-benzylamino-purine, epi-brassinolide, and abscisic acid.”

✓ located verbatim in the source · abstract, characters 544–730 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

axr1-24 showed decreased sensitivity to 1-aminocyclopropane-1-carboxylic acid.

Taxon
ArabidopsisArabidopsist0
Treatment
1-aminocyclopropane-1-carboxylic acide0
Gene
axr1-24e0
Outcome
decreased sensitivitye0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In addition to MeJA and indole-3-acetic acid (IAA), axr1-24 had decreased sensitivity to 1-aminocyclopropane-1-carboxylic acid, 6-benzylamino-purine, epi-brassinolide, and abscisic acid.”

✓ located verbatim in the source · abstract, characters 544–730 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

axr1-24 showed decreased sensitivity to 6-benzylamino-purine.

Taxon
ArabidopsisArabidopsist0
Treatment
6-benzylamino-purinee0
Gene
axr1-24e0
Outcome
decreased sensitivitye0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In addition to MeJA and indole-3-acetic acid (IAA), axr1-24 had decreased sensitivity to 1-aminocyclopropane-1-carboxylic acid, 6-benzylamino-purine, epi-brassinolide, and abscisic acid.”

✓ located verbatim in the source · abstract, characters 544–730 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

axr1-24 showed decreased sensitivity to epi-brassinolide.

Taxon
ArabidopsisArabidopsist0
Treatment
epi-brassinolidee0
Gene
axr1-24e0
Outcome
decreased sensitivitye0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In addition to MeJA and indole-3-acetic acid (IAA), axr1-24 had decreased sensitivity to 1-aminocyclopropane-1-carboxylic acid, 6-benzylamino-purine, epi-brassinolide, and abscisic acid.”

✓ located verbatim in the source · abstract, characters 544–730 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

axr1-24 showed decreased sensitivity to abscisic acid.

Taxon
ArabidopsisArabidopsist0
Treatment
abscisic acide0
Gene
axr1-24e0
Outcome
decreased sensitivitye0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In addition to MeJA and indole-3-acetic acid (IAA), axr1-24 had decreased sensitivity to 1-aminocyclopropane-1-carboxylic acid, 6-benzylamino-purine, epi-brassinolide, and abscisic acid.”

✓ located verbatim in the source · abstract, characters 544–730 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

axr1-24 was susceptible to Pythium irregulare.

Taxon
ArabidopsisArabidopsist0
Interactor
Pythium irregulareGlobisporangium irregularee0pathogen
Gene
axr1-24e0
Outcome
susceptible to the opportunistic pathogen Pythium irregularee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Both axr1-24 and the previously characterized axr1-3 allele were shown to be susceptible to the opportunistic pathogen Pythium irregulare, a trait found in other jasmonate response mutants, including jar1-1.”

✓ located verbatim in the source · abstract, characters 731–938 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

axr1-3 was susceptible to Pythium irregulare.

Taxon
ArabidopsisArabidopsist0
Interactor
Pythium irregulareGlobisporangium irregularee0pathogen
Gene
axr1-3e0
Outcome
susceptible to the opportunistic pathogen Pythium irregularee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Both axr1-24 and the previously characterized axr1-3 allele were shown to be susceptible to the opportunistic pathogen Pythium irregulare, a trait found in other jasmonate response mutants, including jar1-1.”

✓ located verbatim in the source · abstract, characters 731–938 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

The double mutant was more resistant to MeJA inhibition of root growth than either single mutant.

Taxon
ArabidopsisArabidopsist0
Material
jar1-1/axr1-3e0
Treatment
MeJAe0
Outcome
inhibition of root growth by MeJAe0
Direction
more resistante0
Comparator
either single mutante0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The double mutant jar1-1/axr1-3 was more resistant to inhibition of root growth by MeJA and was more susceptible to P. irregulare infection than either single mutant, suggesting these genes might act in independent response pathways.”

✓ located verbatim in the source · abstract, characters 939–1172 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

The double mutant was more susceptible to P. irregulare infection than either single mutant.

Taxon
ArabidopsisArabidopsist0
Material
jar1-1/axr1-3e0
Interactor
P. irregulareGlobisporangium irregularee0pathogen
Outcome
P. irregulare infectione0
Direction
more susceptiblee0
Comparator
either single mutante0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The double mutant jar1-1/axr1-3 was more resistant to inhibition of root growth by MeJA and was more susceptible to P. irregulare infection than either single mutant, suggesting these genes might act in independent response pathways.”

✓ located verbatim in the source · abstract, characters 939–1172 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The two genes may act in independent response pathways.

Taxon
ArabidopsisArabidopsist0
Gene
jar1-1/axr1-3e0
Outcome
independent response pathwayse0
Qualifier
suggesting these genes might acte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The double mutant jar1-1/axr1-3 was more resistant to inhibition of root growth by MeJA and was more susceptible to P. irregulare infection than either single mutant, suggesting these genes might act in independent response pathways.”

✓ located verbatim in the source · abstract, characters 939–1172 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultno effectmeasured

Claim · model-written summary

Double-mutant resistance to IAA did not differ from axr1-3.

Taxon
ArabidopsisArabidopsist0
Material
double mutante0
Outcome
resistance to IAAe0
Direction
not differente0
Comparator
axr1-3e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In contrast, resistance to IAA in the double mutant was not different from axr1-3.”

✓ located verbatim in the source · abstract, characters 1173–1255 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

IAA induced lipoxygenase 2, AOS and AtVSP transcripts.

Taxon
ArabidopsisArabidopsist0
Treatment
IAAe0
Gene
lipoxygenase 2, AOS, and AtVSPe0
Outcome
gene transcriptse0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Northern-blot analysis showed that IAA induced the jasmonate-responsive lipoxygenase 2, AOS, and AtVSP gene transcripts and induction was strongly impaired in axr1-3.”

✓ located verbatim in the source · abstract, characters 1256–1422 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

IAA induction of these transcripts was strongly impaired in axr1-3.

Taxon
ArabidopsisArabidopsist0
Treatment
IAAe0
Gene
axr1-3e0
Outcome
inductione0
Direction
strongly impairede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Northern-blot analysis showed that IAA induced the jasmonate-responsive lipoxygenase 2, AOS, and AtVSP gene transcripts and induction was strongly impaired in axr1-3.”

✓ located verbatim in the source · abstract, characters 1256–1422 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Associationobservedoriginal resultno effectmeasured

Claim · model-written summary

MeJA-induced transcript expression was minimally affected in axr1-3.

Taxon
ArabidopsisArabidopsist0
Treatment
MeJAe0
Gene
axr1-3e0
Outcome
transcript inductione0
Direction
minimally affectede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“However, transcript induction by MeJA was only minimally affected in axr1-3.”

✓ located verbatim in the source · abstract, characters 1423–1499 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

AXR1 is involved in MeJA response, linking jasmonate and auxin signaling.

Taxon
ArabidopsisArabidopsist0
Gene
AXR1e0
Outcome
MeJA responsee0
Qualifier
mechanistic link between jasmonate and auxin-signaling pathwayse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This study demonstrates that in addition to auxin signaling, the AXR1 locus is involved in MeJA response, providing a mechanistic link between jasmonate and auxin-signaling pathways.”

✓ located verbatim in the source · abstract, characters 1500–1682 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 3–14 · show in text ↑

indole-3-acetic acid · molecular: expression · ArabidopsisPositive and negative results

9 papers: 8 positive, 1 negative or no effect

7 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

5 papers more in this group

See all 9 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.