Paper · 2010 · Plant and Cell Physiology

UV Radiation-Responsive Proteins in Rice Leaves: A Proteomic Analysis

Hongmei Du; Yu Liang; Kequan Pei; et al.

8
claims
22
verbatim quotes
62
citations
2
research areas
✓
Open access

Abstract

Depletion of stratospheric ozone has led to increased UV radiation reaching the surface of the Earth. This may damage plants. Using physiological, proteomic and quantitative real-time PCR (qPCR) methods, we systematically studied the response of 16-day-old rice seedlings to UV [0.67 W m(-2) biologically effective UVB (UVB(BE)) and 0.28 W m(-2) UVA] exposure for 6, 12 and 24 h. UV exposure resulted in the appearance of light brown patches on leaves, a decrease in the net photosynthetic rate (Pn), lipid peroxidation, accumulation of UV-absorbing compounds (including flavonoids and other phenolic pigments) and differential expression of 22 proteins. Both physiological and molecular responses became stronger with increasing UV exposure time, indicating the effects of UV accumulation on plants. UV-induced responses included (i) phytohormone-regulative responses (up-regulation of proteins related to phytohormone synthesis such as IAA and ethylene); (ii) injurious responses (photosynthesis suppression, lipid peroxidation and visible injury); and (iii) protective responses (accumulation of UV-absorbing compounds and differential expression of proteins involved in detoxification/antioxidation, defense, protein processing, RNA processing, carbohydrate metabolism and secondary metabolism). The identification of UV-responsive proteins provided a better understanding of the molecular mechanism of plant responses to UV stress. Proteomic and qPCR analysis identified one up-regulated and two induced proteins with important functions: tryptophan synthase α chain (production of radical oxygen species), glyoxalase I (detoxification/antioxidation) and a Bet v I family protein (defense). These results will contribute to future research into their roles in UV stress responses in plants.

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Claims 8

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

UV exposure caused light brown patches to appear on rice leaves.

Organ / stage
leavese1
Treatment
UV exposuree0
Outcome
appearance of light brown patchese1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“UV exposure resulted in”

✓ located verbatim in the source · abstract, characters 380–403 · show in text ↑
e1

“the appearance of light brown patches on leaves”

✓ located verbatim in the source · abstract, characters 404–451 · show in text ↑
t0

“Rice Leaves”

✓ located verbatim in the source · title, characters 36–47 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

UV exposure decreased the net photosynthetic rate of rice seedlings.

Treatment
UV exposuree0
Outcome
net photosynthetic ratee1
Direction
decreasee1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“UV exposure resulted in”

✓ located verbatim in the source · abstract, characters 380–403 · show in text ↑
e1

“a decrease in the net photosynthetic rate (Pn)”

✓ located verbatim in the source · abstract, characters 453–499 · show in text ↑
t0

“Rice Leaves”

✓ located verbatim in the source · title, characters 36–47 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

UV exposure led to lipid peroxidation in rice seedlings.

Treatment
UV exposuree0
Outcome
lipid peroxidatione1
Direction
increaseinferrede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“UV exposure resulted in”

✓ located verbatim in the source · abstract, characters 380–403 · show in text ↑
e1

“net photosynthetic rate (Pn), lipid peroxidation”

✓ located verbatim in the source · abstract, characters 471–519 · show in text ↑
t0

“Rice Leaves”

✓ located verbatim in the source · title, characters 36–47 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

UV exposure led to accumulation of UV-absorbing compounds, including flavonoids and other phenolic pigments.

Treatment
UV exposuree0
Outcome
UV-absorbing compoundse1
Direction
accumulatione1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“UV exposure resulted in”

✓ located verbatim in the source · abstract, characters 380–403 · show in text ↑
e1

“accumulation of UV-absorbing compounds (including flavonoids and other phenolic pigments)”

✓ located verbatim in the source · abstract, characters 521–610 · show in text ↑
t0

“Rice Leaves”

✓ located verbatim in the source · title, characters 36–47 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

UV exposure resulted in differential expression of 22 proteins in rice leaves.

Treatment
UV exposuree0
Outcome
differential expression of 22 proteinse1
Value
22e1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“UV exposure resulted in”

✓ located verbatim in the source · abstract, characters 380–403 · show in text ↑
e1

“differential expression of 22 proteins”

✓ located verbatim in the source · abstract, characters 615–653 · show in text ↑
t0

“Rice Leaves”

✓ located verbatim in the source · title, characters 36–47 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Both physiological and molecular responses of rice seedlings became stronger with increasing UV exposure time.

Treatment
increasing UV exposure timee0
Outcome
physiological and molecular responsese0
Direction
strongere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Both physiological and molecular responses became stronger with increasing UV exposure time”

✓ located verbatim in the source · abstract, characters 655–746 · show in text ↑
t0

“Rice Leaves”

✓ located verbatim in the source · title, characters 36–47 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Proteins related to phytohormone synthesis, such as IAA and ethylene, were up-regulated in UV-exposed rice.

Compound
IAA and ethylenee0
Outcome
proteins related to phytohormone synthesise0
Direction
up-regulatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“up-regulation of proteins related to phytohormone synthesis such as IAA and ethylene”

✓ located verbatim in the source · abstract, characters 870–954 · show in text ↑
t0

“Rice Leaves”

✓ located verbatim in the source · title, characters 36–47 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Proteomic and qPCR analysis identified one up-regulated and two induced UV-responsive proteins: tryptophan synthase α chain, glyoxalase I and a Bet v I family protein.

Gene
tryptophan synthase α chaine1
Outcome
one up-regulated and two induced proteinse0
Qualifier
glyoxalase I (detoxification/antioxidation) and a Bet v I family protein (defense)e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“one up-regulated and two induced proteins”

✓ located verbatim in the source · abstract, characters 1476–1517 · show in text ↑
e1

“tryptophan synthase α chain (production of radical oxygen species), glyoxalase I (detoxification/antioxidation) and a Bet v I family protein (defense)”

✓ located verbatim in the source · abstract, characters 1544–1694 · show in text ↑
t0

“Rice Leaves”

✓ located verbatim in the source · title, characters 36–47 · show in text ↑

uv · physiology: oxidative · Oryza sativa (rice)Positive and negative results

12 papers: 2 positive, 10 negative or no effect

9 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. negative
  3. positive

8 papers more in this group

See all 12 papers →

uv · physiology: photosynthesis · Oryza sativa (rice)Positive and negative results

19 papers: 3 positive, 16 negative or no effect

15 papers in the same direction as this paper · 3 in the opposite direction

  1. negative
  2. negative
  3. positive

15 papers more in this group

See all 19 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.