Paper · 2012 · Plant Cell & Environment

OsARF16, a transcription factor, is required for auxin and phosphate starvation response in rice (Oryza sativa L.)

CHENJIA SHEN; SUIKANG WANG; SAINA ZHANG; et al.

8
claims
14
verbatim quotes
168
citations
2
research areas
✓
Open access

Abstract

Plant responses to auxin and phosphate (Pi) starvation are closely linked. However, the underlying mechanisms connecting auxin to phosphate starvation (-Pi) responses are largely unclear. Here, we show that OsARF16, an auxin response factor, functions in both auxin and -Pi responses in rice (Oryza sativa L.). The knockout of OsARF16 led to primary roots (PR), lateral roots (LR) and root hair losing sensitivity to auxin and -Pi response. OsARF16 expression and OsARF16::GUS staining in PR and LR of rice Nipponbare (NIP) were induced by indole acetic acid and -Pi treatments. In -Pi conditions, the shoot biomass of osarf16 was slightly reduced, and neither root growth nor iron content was induced, indicating that the knockout of OsARF16 led to loss of response to Pi deficiency in rice. Six phosphate starvation-induced genes (PSIs) were less induced by -Pi in osarf16 and these trends were similar to a knockdown mutant of OsPHR2 or AtPHR1, which was a key regulator under -Pi. These data first reveal the biological function of OsARF16, provide novel evidence of a linkage between auxin and -Pi responses and facilitate the development of new strategies for the efficient utilization of Pi in rice.

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Claims 8

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsARF16 knockout caused primary roots to lose sensitivity to auxin.

Taxon
rice (Oryza sativa L.)Oryza sativae1
Organ / stage
primary roots (PR)e0
Treatment
knockout of OsARF16e0
Gene
OsARF16e0
Outcome
sensitivity to auxine0
Direction
losinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The knockout of OsARF16 led to primary roots (PR), lateral roots (LR) and root hair losing sensitivity to auxin and -Pi response.”

✓ located verbatim in the source · abstract, characters 311–440 · show in text ↑
e1

“in rice (Oryza sativa L.)”

✓ located verbatim in the source · abstract, characters 284–309 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsARF16 knockout caused lateral roots and root hairs to lose sensitivity to auxin and phosphate starvation.

Taxon
rice (Oryza sativa L.)Oryza sativae1
Organ / stage
lateral roots (LR) and root haire0
Treatment
knockout of OsARF16e0
Gene
OsARF16e0
Outcome
sensitivity to auxin and -Pi responsee0
Direction
losinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The knockout of OsARF16 led to primary roots (PR), lateral roots (LR) and root hair losing sensitivity to auxin and -Pi response.”

✓ located verbatim in the source · abstract, characters 311–440 · show in text ↑
e1

“in rice (Oryza sativa L.)”

✓ located verbatim in the source · abstract, characters 284–309 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Indole acetic acid induced OsARF16 expression and reporter staining in Nipponbare primary and lateral roots.

Material
Nipponbare (NIP)e0
Organ / stage
PR and LRe0
Treatment
indole acetic acide0
Gene
OsARF16e0
Outcome
OsARF16 expression and OsARF16::GUS staininge0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsARF16 expression and OsARF16::GUS staining in PR and LR of rice Nipponbare (NIP) were induced by indole acetic acid and -Pi treatments.”

✓ located verbatim in the source · abstract, characters 441–578 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Phosphate starvation induced OsARF16 expression and reporter staining in Nipponbare primary and lateral roots.

Material
Nipponbare (NIP)e0
Organ / stage
PR and LRe0
Treatment
-Pi treatmentse0
Gene
OsARF16e0
Outcome
OsARF16 expression and OsARF16::GUS staininge0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsARF16 expression and OsARF16::GUS staining in PR and LR of rice Nipponbare (NIP) were induced by indole acetic acid and -Pi treatments.”

✓ located verbatim in the source · abstract, characters 441–578 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Under phosphate starvation, osarf16 shoot biomass was slightly reduced.

Taxon
rice (Oryza sativa L.)Oryza sativae1
Material
osarf16e0
Organ / stage
shoote0
Treatment
-Pi conditionse0
Outcome
shoot biomasse0
Direction
slightly reducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In -Pi conditions, the shoot biomass of osarf16 was slightly reduced”

✓ located verbatim in the source · abstract, characters 579–647 · show in text ↑
e1

“in rice (Oryza sativa L.)”

✓ located verbatim in the source · abstract, characters 284–309 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Under phosphate starvation, osarf16 root growth was not induced.

Taxon
rice (Oryza sativa L.)Oryza sativae1
Material
osarf16e0
Organ / stage
roote0
Treatment
-Pi conditionse0
Outcome
root growthe0
Direction
nor iron content was inducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In -Pi conditions, the shoot biomass of osarf16 was slightly reduced, and neither root growth nor iron content was induced”

✓ located verbatim in the source · abstract, characters 579–701 · show in text ↑
e1

“in rice (Oryza sativa L.)”

✓ located verbatim in the source · abstract, characters 284–309 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Under phosphate starvation, osarf16 iron content was not induced.

Taxon
rice (Oryza sativa L.)Oryza sativae1
Material
osarf16e0
Treatment
-Pi conditionse0
Outcome
iron contente0
Direction
was inducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In -Pi conditions, the shoot biomass of osarf16 was slightly reduced, and neither root growth nor iron content was induced”

✓ located verbatim in the source · abstract, characters 579–701 · show in text ↑
e1

“in rice (Oryza sativa L.)”

✓ located verbatim in the source · abstract, characters 284–309 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Six phosphate starvation-induced genes were less induced by phosphate starvation in osarf16.

Taxon
rice (Oryza sativa L.)Oryza sativae1
Material
osarf16e0
Treatment
-Pie0
Gene
phosphate starvation-induced genes (PSIs)e0
Outcome
phosphate starvation-induced genes (PSIs)e0
Direction
less inducede0
Value
Sixe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Six phosphate starvation-induced genes (PSIs) were less induced by -Pi in osarf16”

✓ located verbatim in the source · abstract, characters 793–874 · show in text ↑
e1

“in rice (Oryza sativa L.)”

✓ located verbatim in the source · abstract, characters 284–309 · show in text ↑

indole-3-acetic acid · molecular: expression · Oryza sativa (rice)Positive and negative results

14 papers: 12 positive, 2 negative or no effect

11 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

10 papers more in this group

See all 14 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.