Paper · 2012 · Bangladesh Journal of Plant Breeding and Genetics

EXPRESSION PATTERNS OF AN ABIOTIC STRESS-INDUCIBLE DEHYDRATION RESPONSIVE ELEMENT BINDING PROTEIN-2 (DREB2) GENE IN TOMATO

M. S. Islam; M. H. Wang

9
claims
16
verbatim quotes
1
citations
2
research areas
✓
Open access · cc-by

Abstract

A novel DREB (dehydration-responsive element binding) gene, designated as LeDREB2, was isolated from tomato. Based on multiple sequence alignment and phylogenetic characterization, LeDREB2 gene was classified into an A-2 group member of the DREBs family. We examined the expression pattern of LeDREB2 gene in tomato under different abiotic stresses. Southern blot analysis showed that LeDREB2 is a single copy gene in tomato genome. The organ specific expression profiling indicated that LeDREB2 gene was strongly expressed in young leaves and roots but weak expression in mature leaves and shoots. Northern blot analysis revealed that various kinds of environmental stress such as salt, drought and cold were significantly induced by LeDREB2 gene after application of time courses treatments except little increase in ABA. Our findings showed that the expression of LeDREB2 gene was induced by high salinity, drought and cold but not by the abscisic acid (ABA) treatment. These results indicated that the LeDREB2 gene is a member of the DREB transcription factors, which may play a role in both abiotic and oxidative stress responses.DOI: http://dx.doi.org/10.3329/bjpbg.v25i1.17006

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

A novel LeDREB2 gene was isolated from tomato.

Gene
LeDREB2e0
Outcome
was isolatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“A novel DREB (dehydration-responsive element binding) gene, designated as LeDREB2, was isolated from tomato”

✓ located verbatim in the source · abstract, characters 0–107 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Sequence and phylogenetic analysis classified LeDREB2 in the A-2 DREB group.

Gene
LeDREB2e0
Outcome
A-2 group member of the DREBs familye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“LeDREB2 gene was classified into an A-2 group member of the DREBs family”

✓ located verbatim in the source · abstract, characters 181–253 · show in text ↑
e1

“from tomato”

✓ located verbatim in the source · abstract, characters 96–107 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

LeDREB2 is single copy in the tomato genome.

Gene
LeDREB2e0
Outcome
single copy genee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“LeDREB2 is a single copy gene in tomato genome”

✓ located verbatim in the source · abstract, characters 385–431 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

LeDREB2 expression was strong in young leaves and roots and weak in mature leaves and shoots.

Organ / stage
young leaves and rootse0
Gene
LeDREB2e0
Outcome
strongly expressed in young leaves and roots but weak expression in mature leaves and shootse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“LeDREB2 gene was strongly expressed in young leaves and roots but weak expression in mature leaves and shoots”

✓ located verbatim in the source · abstract, characters 488–597 · show in text ↑
e1

“from tomato”

✓ located verbatim in the source · abstract, characters 96–107 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

High salinity induced LeDREB2 expression.

Treatment
high salinitye0
Gene
LeDREB2e0
Outcome
expression of LeDREB2 genee0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“expression of LeDREB2 gene was induced by high salinity, drought and cold but not by the abscisic acid (ABA) treatment”

✓ located verbatim in the source · abstract, characters 853–971 · show in text ↑
e1

“from tomato”

✓ located verbatim in the source · abstract, characters 96–107 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Drought induced LeDREB2 expression.

Treatment
droughte0
Gene
LeDREB2e0
Outcome
expression of LeDREB2 genee0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“expression of LeDREB2 gene was induced by high salinity, drought and cold but not by the abscisic acid (ABA) treatment”

✓ located verbatim in the source · abstract, characters 853–971 · show in text ↑
e1

“from tomato”

✓ located verbatim in the source · abstract, characters 96–107 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Cold induced LeDREB2 expression.

Treatment
colde0
Gene
LeDREB2e0
Outcome
expression of LeDREB2 genee0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“expression of LeDREB2 gene was induced by high salinity, drought and cold but not by the abscisic acid (ABA) treatment”

✓ located verbatim in the source · abstract, characters 853–971 · show in text ↑
e1

“from tomato”

✓ located verbatim in the source · abstract, characters 96–107 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

ABA treatment did not induce LeDREB2 expression.

Treatment
abscisic acid (ABA) treatmente0
Gene
LeDREB2e0
Outcome
expression of LeDREB2 genee0
Direction
note0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“expression of LeDREB2 gene was induced by high salinity, drought and cold but not by the abscisic acid (ABA) treatment”

✓ located verbatim in the source · abstract, characters 853–971 · show in text ↑
e1

“from tomato”

✓ located verbatim in the source · abstract, characters 96–107 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer a possible role for LeDREB2 in abiotic and oxidative stress responses.

Gene
LeDREB2e0
Outcome
abiotic and oxidative stress responsese0
Qualifier
may play a rolee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“LeDREB2 gene is a member of the DREB transcription factors, which may play a role in both abiotic and oxidative stress responses”

✓ located verbatim in the source · abstract, characters 1006–1134 · show in text ↑
e1

“from tomato”

✓ located verbatim in the source · abstract, characters 96–107 · show in text ↑

(+)-abscisic acid · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

20 papers: 16 positive, 4 negative or no effect

3 papers in the same direction as this paper · 16 in the opposite direction

  1. positive
  2. positive
  3. positive

16 papers more in this group

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salinity · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

27 papers: 18 positive, 9 negative or no effect

17 papers in the same direction as this paper · 9 in the opposite direction

  1. negative
  2. no effect
  3. negative

23 papers more in this group

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cold · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

30 papers: 20 positive, 10 negative or no effect

19 papers in the same direction as this paper · 10 in the opposite direction

  1. positive
  2. negative
  3. negative

26 papers more in this group

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drought · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

40 papers: 27 positive, 13 negative or no effect

26 papers in the same direction as this paper · 13 in the opposite direction

  1. positive
  2. negative
  3. no effect

36 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.