Paper · 2014 · Proteomes

Effect of Aluminum Treatment on Proteomes of Radicles of Seeds Derived from Al-Treated Tomato Plants

Ikenna Okekeogbu; Zhujia Ye; Sasikiran Sangireddy; et al.

5
claims
10
verbatim quotes
26
citations
2
research areas
✓
Open access · cc-by

Abstract

Aluminum (Al) toxicity is a major constraint to plant growth and crop yield in acid soils. Tomato cultivars are especially susceptible to excessive Al3+ accumulated in the root zone. In this study, tomato plants were grown in a hydroponic culture system supplemented with 50 µM AlK(SO4)2. Seeds harvested from Al-treated plants contained a significantly higher Al content than those grown in the control hydroponic solution. In this study, these Al-enriched tomato seeds (harvested from Al-treated tomato plants) were germinated in 50 µM AlK(SO4)2 solution in a homopiperazine-1,4-bis(2-ethanesulfonic acid) buffer (pH 4.0), and the control solution which contained the buffer only. Proteomes of radicles were analyzed quantitatively by mass spectrometry employing isobaric tags for relative and absolute quantitation (iTRAQ®). The proteins identified were assigned to molecular functional groups and cellular metabolic pathways using MapMan. Among the proteins whose abundance levels changed significantly were: a number of transcription factors; proteins regulating gene silencing and programmed cell death; proteins in primary and secondary signaling pathways, including phytohormone signaling and proteins for enhancing tolerance to abiotic and biotic stress. Among the metabolic pathways, enzymes in glycolysis and fermentation and sucrolytic pathways were repressed. Secondary metabolic pathways including the mevalonate pathway and lignin biosynthesis were induced. Biological reactions in mitochondria seem to be induced due to an increase in the abundance level of mitochondrial ribosomes and enzymes in the TCA cycle, electron transport chains and ATP synthesis.

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Claims 5

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Seeds from aluminum-treated plants had significantly higher aluminum content than controls.

Organ / stage
Seedse0
Treatment
Al-treatede0
Outcome
Al contente0
Direction
highere0
Comparator
control hydroponic solutione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Seeds harvested from Al-treated plants contained a significantly higher Al content than those grown in the control hydroponic solution.”

✓ located verbatim in the source · abstract, characters 289–424 · show in text ↑
e1

“In this study, tomato plants”

✓ located verbatim in the source · abstract, characters 183–211 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Several regulatory and stress-related protein groups changed significantly in abundance.

Organ / stage
seedse1
Outcome
proteins whose abundance levels changed significantlye0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Among the proteins whose abundance levels changed significantly were: a number of transcription factors; proteins regulating gene silencing and programmed cell death; proteins in primary and secondary signaling pathways, including phytohormone signaling and proteins for enhancing tolerance to abiotic and biotic stress.”

✓ located verbatim in the source · abstract, characters 943–1263 · show in text ↑
e1

“Al-enriched tomato seeds”

✓ located verbatim in the source · abstract, characters 446–470 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Glycolysis, fermentation and sucrolytic pathway enzymes were repressed.

Organ / stage
seedse1
Outcome
enzymes in glycolysis and fermentation and sucrolytic pathwayse0
Direction
repressede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“enzymes in glycolysis and fermentation and sucrolytic pathways were repressed”

✓ located verbatim in the source · abstract, characters 1294–1371 · show in text ↑
e1

“Al-enriched tomato seeds”

✓ located verbatim in the source · abstract, characters 446–470 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Mevalonate and lignin biosynthesis pathways were induced.

Organ / stage
seedse1
Outcome
mevalonate pathway and lignin biosynthesise0
Direction
inducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Secondary metabolic pathways including the mevalonate pathway and lignin biosynthesis were induced.”

✓ located verbatim in the source · abstract, characters 1373–1472 · show in text ↑
e1

“Al-enriched tomato seeds”

✓ located verbatim in the source · abstract, characters 446–470 · show in text ↑
Observationauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Mitochondrial reactions appeared induced, with higher mitochondrial ribosome and energy enzyme abundance.

Organ / stage
seedse1
Outcome
Biological reactions in mitochondriae0
Direction
inducede0
Qualifier
seem to bee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Biological reactions in mitochondria seem to be induced due to an increase in the abundance level of mitochondrial ribosomes and enzymes in the TCA cycle, electron transport chains and ATP synthesis.”

✓ located verbatim in the source · abstract, characters 1473–1672 · show in text ↑
e1

“Al-enriched tomato seeds”

✓ located verbatim in the source · abstract, characters 446–470 · show in text ↑

aluminium atom · molecular: metabolites · Solanum lycopersicum (tomato)Positive and negative results

6 papers: 2 positive, 4 negative or no effect

3 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. positive
  3. positive

2 papers more in this group

See all 6 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.