Paper · 2008 · Functional Plant Biology

The promoter from SlREO, a highly-expressed, root-specific Solanum lycopersicum gene, directs expression to cortex of mature roots

Matthew O. Jones; Kenneth Manning; John Andrews; et al.

10
claims
24
verbatim quotes
23
citations
2
research areas
—
Not open access

Abstract

Root-specific promoters are valuable tools for targeting transgene expression, but many of those already described have limitations to their general applicability. We present the expression characteristics of SlREO, a novel gene isolated from tomato (Solanum lycopersicum L.). This gene was highly expressed in roots but had a very low level of expression in aerial plant organs. A 2.4-kb region representing the SlREO promoter sequence was cloned upstream of the uidA GUS reporter gene and shown to direct expression in the root cortex. In mature, glasshouse-grown plants this strict root specificity was maintained. Furthermore, promoter activity was unaffected by dehydration or wounding stress but was somewhat suppressed by exposure to NaCl, salicylic acid and jasmonic acid. The predicted protein sequence of SlREO contains a domain found in enzymes of the 2-oxoglutarate and Fe(II)-dependent dioxygenase superfamily. The novel SlREO promoter has properties ideal for applications requiring strong and specific gene expression in the bulk of tomato root tissue growing in soil, and is also likely to be useful in other Solanaceous crops.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

SlREO expression was high in roots and very low in aerial organs.

Organ / stage
rootse0
Gene
SlREOe0
Outcome
highly expressed in roots but had a very low level of expression in aerial plant organse0
Direction
highlye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“SlREO, a novel gene isolated from tomato (Solanum lycopersicum L.). This gene was highly expressed in roots but had a very low level of expression in aerial plant organs.”

✓ located verbatim in the source · abstract, characters 209–379 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The SlREO promoter directed reporter expression in root cortex.

Organ / stage
root cortexe0
Gene
SlREOe0
Outcome
direct expression in the root cortexe0
Value
2.4-kbe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“A 2.4-kb region representing the SlREO promoter sequence was cloned upstream of the uidA GUS reporter gene and shown to direct expression in the root cortex.”

✓ located verbatim in the source · abstract, characters 380–537 · show in text ↑
e1

“tomato (Solanum lycopersicum L.)”

✓ located verbatim in the source · abstract, characters 243–275 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

SlREO promoter root specificity persisted in mature glasshouse-grown plants.

Organ / stage
maturee0
Gene
SlREOe2
Outcome
strict root specificity was maintainede0
Setting
glasshouse-growne0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“In mature, glasshouse-grown plants this strict root specificity was maintained.”

✓ located verbatim in the source · abstract, characters 538–617 · show in text ↑
e1

“tomato (Solanum lycopersicum L.)”

✓ located verbatim in the source · abstract, characters 243–275 · show in text ↑
e2

“SlREO promoter sequence”

✓ located verbatim in the source · abstract, characters 413–436 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Dehydration did not affect promoter activity.

Treatment
dehydratione0
Gene
SlREOe2
Outcome
promoter activitye0
Direction
unaffectede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“promoter activity was unaffected by dehydration or wounding stress”

✓ located verbatim in the source · abstract, characters 631–697 · show in text ↑
e1

“tomato (Solanum lycopersicum L.)”

✓ located verbatim in the source · abstract, characters 243–275 · show in text ↑
e2

“SlREO promoter sequence”

✓ located verbatim in the source · abstract, characters 413–436 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Wounding stress did not affect promoter activity.

Treatment
wounding stresse0
Gene
SlREOe2
Outcome
promoter activitye0
Direction
unaffectede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“promoter activity was unaffected by dehydration or wounding stress”

✓ located verbatim in the source · abstract, characters 631–697 · show in text ↑
e1

“tomato (Solanum lycopersicum L.)”

✓ located verbatim in the source · abstract, characters 243–275 · show in text ↑
e2

“SlREO promoter sequence”

✓ located verbatim in the source · abstract, characters 413–436 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

NaCl exposure somewhat suppressed promoter activity.

Treatment
NaCle0
Gene
SlREOe2
Outcome
promoter activitye0
Direction
suppressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“promoter activity was unaffected by dehydration or wounding stress but was somewhat suppressed by exposure to NaCl, salicylic acid and jasmonic acid.”

✓ located verbatim in the source · abstract, characters 631–780 · show in text ↑
e1

“tomato (Solanum lycopersicum L.)”

✓ located verbatim in the source · abstract, characters 243–275 · show in text ↑
e2

“SlREO promoter sequence”

✓ located verbatim in the source · abstract, characters 413–436 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salicylic acid exposure somewhat suppressed promoter activity.

Treatment
salicylic acide0
Gene
SlREOe2
Outcome
promoter activitye0
Direction
suppressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“promoter activity was unaffected by dehydration or wounding stress but was somewhat suppressed by exposure to NaCl, salicylic acid and jasmonic acid.”

✓ located verbatim in the source · abstract, characters 631–780 · show in text ↑
e1

“tomato (Solanum lycopersicum L.)”

✓ located verbatim in the source · abstract, characters 243–275 · show in text ↑
e2

“SlREO promoter sequence”

✓ located verbatim in the source · abstract, characters 413–436 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Jasmonic acid exposure somewhat suppressed promoter activity.

Treatment
jasmonic acide0
Gene
SlREOe2
Outcome
promoter activitye0
Direction
suppressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“promoter activity was unaffected by dehydration or wounding stress but was somewhat suppressed by exposure to NaCl, salicylic acid and jasmonic acid.”

✓ located verbatim in the source · abstract, characters 631–780 · show in text ↑
e1

“tomato (Solanum lycopersicum L.)”

✓ located verbatim in the source · abstract, characters 243–275 · show in text ↑
e2

“SlREO promoter sequence”

✓ located verbatim in the source · abstract, characters 413–436 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Predicted SlREO protein contains a dioxygenase superfamily domain.

Gene
SlREOe0
Outcome
contains a domain found in enzymes of the 2-oxoglutarate and Fe(II)-dependent dioxygenase superfamilye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The predicted protein sequence of SlREO contains a domain found in enzymes of the 2-oxoglutarate and Fe(II)-dependent dioxygenase superfamily.”

✓ located verbatim in the source · abstract, characters 781–923 · show in text ↑
e1

“tomato (Solanum lycopersicum L.)”

✓ located verbatim in the source · abstract, characters 243–275 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors identify the SlREO promoter as useful for strong, root-specific expression in tomato and possibly other Solanaceous crops.

Gene
SlREOe0
Outcome
strong and specific gene expression in the bulk of tomato root tissuee0
Qualifier
also likely to be useful in other Solanaceous cropse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The novel SlREO promoter has properties ideal for applications requiring strong and specific gene expression in the bulk of tomato root tissue growing in soil, and is also likely to be useful in other Solanaceous crops.”

✓ located verbatim in the source · abstract, characters 924–1143 · show in text ↑

jasmonic acid · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

7 papers: 5 positive, 2 negative or no effect

1 paper in the same direction as this paper · 5 in the opposite direction

  1. positive
  2. positive
  3. positive

3 papers more in this group

See all 7 papers →

sodium chloride · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

12 papers: 6 positive, 6 negative or no effect

5 papers in the same direction as this paper · 6 in the opposite direction

  1. positive
  2. positive
  3. positive

8 papers more in this group

See all 12 papers →

salicylic acid · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

37 papers: 34 positive, 3 negative or no effect

2 papers in the same direction as this paper · 34 in the opposite direction

  1. positive
  2. positive
  3. positive

33 papers more in this group

See all 37 papers →

mechanical · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

22 papers: 16 positive, 6 negative or no effect

5 papers in the same direction as this paper · 16 in the opposite direction

  1. positive
  2. positive
  3. positive

18 papers more in this group

See all 22 papers →

drought · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

40 papers: 27 positive, 13 negative or no effect

12 papers in the same direction as this paper · 27 in the opposite direction

  1. positive
  2. positive
  3. positive

36 papers more in this group

See all 40 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.