Paper · 2008 · Biochemical Journal

Comparative analysis of CAX2-like cation transporters indicates functional and regulatory diversity

Clare Edmond; Toshiro Shigaki; Sophie Ewert; et al.

11
claims
22
verbatim quotes
99
citations
2
research areas
✓
Open access

Abstract

Internal compartmentalization of metals is an important metal tolerance mechanism in many organisms. In plants and fungi, sequestration into the vacuole is a major detoxification mechanism for metals. Cation transport into the vacuole can be mediated by CAX (cation exchanger) transporters. The Arabidopsis thaliana AtCAX2 transporter was shown previously to transport Ca(2+), Cd(2+) and Mn(2+). To assess the conservation of the functional and regulatory characteristics of CAX2-like transporters in higher plants, we have characterized AtCAX2 orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2). Substrate specificity and regulatory activity were assessed using a yeast heterologous-expression assay. Each CAX could transport Ca(2+) and Mn(2+) into the yeast vacuole, but they each had different cation transport kinetics. Most notably, there was variation in the regulation of the transporters. As found with AtCAX2 previously, only expression of an N-terminally truncated form of AtCAX5 in yeast was able to mediate Ca(2+) and Mn(2+) transport, indicating that activity may be controlled by an autoregulatory region at the N-terminus. In contrast, either full-length or truncated LeCAX2 could efficiently transport Ca(2+), although Mn(2+) transport was controlled by the N-terminus. HvCAX2 did not appear to possess an N-terminal regulatory domain. Expression of AtCAX2 was not significantly modulated by metal stress; however, AtCAX5 and HvCAX2 were transcriptionally up-regulated by high Mn(2+) treatment, and by Ca(2+) and Na(+) stress respectively. It is therefore apparent that, despite the high sequence identity between plant CAX2 orthologues, there is significant diversity in their functional characteristics, particularly with regard to regulatory mechanisms.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

Only an N-terminally truncated form of AtCAX5 expressed in yeast mediated Ca(2+) and Mn(2+) transport.

Taxon
ArabidopsisArabidopsise2
Gene
AtCAX5e1
Outcome
Ca(2+) and Mn(2+) transporte1
Setting
yeaste1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“only expression of an N-terminally truncated form of AtCAX5 in yeast was able to mediate Ca(2+) and Mn(2+) transport”

✓ located verbatim in the source · abstract, characters 954–1070 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Full-length or truncated LeCAX2 could efficiently transport Ca(2+).

Gene
LeCAX2e3
Outcome
transport Ca(2+)e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“In contrast, either full-length or truncated LeCAX2 could efficiently transport Ca(2+), although Mn(2+) transport was controlled by the N-terminus”

✓ located verbatim in the source · abstract, characters 1162–1308 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Mn(2+) transport by LeCAX2 was controlled by its N-terminus.

Gene
LeCAX2e3
Outcome
Mn(2+) transporte3
Qualifier
was controlled by the N-terminuse3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“In contrast, either full-length or truncated LeCAX2 could efficiently transport Ca(2+), although Mn(2+) transport was controlled by the N-terminus”

✓ located verbatim in the source · abstract, characters 1162–1308 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

HvCAX2 did not appear to possess an N-terminal regulatory domain.

Gene
HvCAX2e4
Outcome
N-terminal regulatory domaine4
Qualifier
did not appear to possesse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e4

“HvCAX2 did not appear to possess an N-terminal regulatory domain”

✓ located verbatim in the source · abstract, characters 1310–1374 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

HvCAX2 transported Ca(2+) and Mn(2+) into the yeast vacuole.

Gene
HvCAX2e2
Outcome
transport Ca(2+) and Mn(2+)e5
Setting
yeaste5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e5

“Each CAX could transport Ca(2+) and Mn(2+) into the yeast vacuole, but they each had different cation transport kinetics”

✓ located verbatim in the source · abstract, characters 726–846 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AtCAX5 was transcriptionally up-regulated by high Mn(2+) treatment.

Taxon
ArabidopsisArabidopsise2
Treatment
high Mn(2+) treatmente6
Gene
AtCAX5e6
Outcome
transcriptionally up-regulatede6
Direction
up-regulatede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e6

“AtCAX5 and HvCAX2 were transcriptionally up-regulated by high Mn(2+) treatment, and by Ca(2+) and Na(+) stress respectively”

✓ located verbatim in the source · abstract, characters 1455–1578 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

HvCAX2 was transcriptionally up-regulated by high Mn(2+) treatment.

Treatment
high Mn(2+) treatmente6
Gene
HvCAX2e6
Outcome
transcriptionally up-regulatede6
Direction
up-regulatede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e6

“AtCAX5 and HvCAX2 were transcriptionally up-regulated by high Mn(2+) treatment, and by Ca(2+) and Na(+) stress respectively”

✓ located verbatim in the source · abstract, characters 1455–1578 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AtCAX5 was transcriptionally up-regulated by Ca(2+) stress.

Taxon
ArabidopsisArabidopsise2
Treatment
Ca(2+) and Na(+) stresse6
Gene
AtCAX5e6
Outcome
transcriptionally up-regulatede6
Direction
up-regulatede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Schema note from the model: "respectively" pairing read in listed order (AtCAX5 with Ca(2+), HvCAX2 with Na(+)); treatment field keeps both stresses

Verbatim

e6

“AtCAX5 and HvCAX2 were transcriptionally up-regulated by high Mn(2+) treatment, and by Ca(2+) and Na(+) stress respectively”

✓ located verbatim in the source · abstract, characters 1455–1578 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

HvCAX2 was transcriptionally up-regulated by Na(+) stress.

Treatment
Ca(2+) and Na(+) stresse6
Gene
HvCAX2e6
Outcome
transcriptionally up-regulatede6
Direction
up-regulatede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Schema note from the model: "respectively" pairing read in listed order (AtCAX5 with Ca(2+), HvCAX2 with Na(+)); treatment field keeps both stresses

Verbatim

e6

“AtCAX5 and HvCAX2 were transcriptionally up-regulated by high Mn(2+) treatment, and by Ca(2+) and Na(+) stress respectively”

✓ located verbatim in the source · abstract, characters 1455–1578 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Expression of AtCAX2 was not significantly modulated by metal stress.

Taxon
ArabidopsisArabidopsise2
Treatment
metal stresse7
Gene
AtCAX2e7
Outcome
Expressione7
Direction
not significantly modulatede7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e7

“Expression of AtCAX2 was not significantly modulated by metal stress”

✓ located verbatim in the source · abstract, characters 1376–1444 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AtCAX5, LeCAX2 and HvCAX2 differed in cation transport kinetics.

Taxon
ArabidopsisArabidopsise2
Outcome
cation transport kineticse5
Qualifier
they each had differente5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Schema note from the model: comparison across orthologues from three plants; taxon is the first plant named

Verbatim

e5

“Each CAX could transport Ca(2+) and Mn(2+) into the yeast vacuole, but they each had different cation transport kinetics”

✓ located verbatim in the source · abstract, characters 726–846 · show in text ↑
e2

“orthologues from Arabidopsis (AtCAX5), tomato (LeCAX2) and barley (HvCAX2)”

✓ located verbatim in the source · abstract, characters 545–619 · show in text ↑

heavy metal · molecular: expression · ArabidopsisPositive and negative results

8 papers: 5 positive, 3 negative or no effect

2 papers in the same direction as this paper · 5 in the opposite direction

  1. positive
  2. positive
  3. positive

4 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.