Paper · 2010 · PLANT PHYSIOLOGY

Analysis of Arabidopsis with Highly Reduced Levels of Malate and Fumarate Sheds Light on the Role of These Organic Acids as Storage Carbon Molecules

Martina B. Zell; Holger Fahnenstich; Alexandra Maier; et al.

9
claims
19
verbatim quotes
117
citations
2
research areas
✓
Open access

Abstract

While malate and fumarate participate in a multiplicity of pathways in plant metabolism, the function of these organic acids as carbon stores in C(3) plants has not been deeply addressed. Here, Arabidopsis (Arabidopsis thaliana) plants overexpressing a maize (Zea mays) plastidic NADP-malic enzyme (MEm plants) were used to analyze the consequences of sustained low malate and fumarate levels on the physiology of this C(3) plant. When grown in short days (sd), MEm plants developed a pale-green phenotype with decreased biomass and increased specific leaf area, with thin leaves having lower photosynthetic performance. These features were absent in plants growing in long days. The analysis of metabolite levels of rosettes from transgenic plants indicated similar disturbances in both sd and long days, with very low levels of malate and fumarate. Determinations of the respiratory quotient by the end of the night indicated a shift from carbohydrates to organic acids as the main substrates for respiration in the wild type, while MEm plants use more reduced compounds, like fatty acids and proteins, to fuel respiration. It is concluded that the alterations observed in sd MEm plants are a consequence of impairment in the supply of carbon skeletons during a long dark period. This carbon starvation phenotype observed at the end of the night demonstrates a physiological role of the C(4) acids, which may be a constitutive function in plants.

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Claims 9

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

MEm plants grown in short days had decreased biomass.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianae0
Material
MEm plantse1
Treatment
overexpressing a maize (Zea mays) plastidic NADP-malic enzymee0
Gene
maize (Zea mays) plastidic NADP-malic enzymee0
Outcome
biomasse1
Direction
decreasede1
Setting
short days (sd)e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis (Arabidopsis thaliana) plants overexpressing a maize (Zea mays) plastidic NADP-malic enzyme (MEm plants)”

✓ located verbatim in the source · abstract, characters 194–310 · show in text ↑
e1

“When grown in short days (sd), MEm plants developed a pale-green phenotype with decreased biomass and increased specific leaf area, with thin leaves having lower photosynthetic performance”

✓ located verbatim in the source · abstract, characters 431–619 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

MEm plants grown in short days had increased specific leaf area.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianae0
Material
MEm plantse1
Treatment
overexpressing a maize (Zea mays) plastidic NADP-malic enzymee0
Gene
maize (Zea mays) plastidic NADP-malic enzymee0
Outcome
specific leaf areae1
Direction
increasede1
Setting
short days (sd)e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis (Arabidopsis thaliana) plants overexpressing a maize (Zea mays) plastidic NADP-malic enzyme (MEm plants)”

✓ located verbatim in the source · abstract, characters 194–310 · show in text ↑
e1

“When grown in short days (sd), MEm plants developed a pale-green phenotype with decreased biomass and increased specific leaf area, with thin leaves having lower photosynthetic performance”

✓ located verbatim in the source · abstract, characters 431–619 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

MEm plants grown in short days had thin leaves with lower photosynthetic performance.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianae0
Material
MEm plantse1
Treatment
overexpressing a maize (Zea mays) plastidic NADP-malic enzymee0
Outcome
photosynthetic performancee1
Direction
lowere1
Qualifier
thin leavese1
Setting
short days (sd)e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis (Arabidopsis thaliana) plants overexpressing a maize (Zea mays) plastidic NADP-malic enzyme (MEm plants)”

✓ located verbatim in the source · abstract, characters 194–310 · show in text ↑
e1

“When grown in short days (sd), MEm plants developed a pale-green phenotype with decreased biomass and increased specific leaf area, with thin leaves having lower photosynthetic performance”

✓ located verbatim in the source · abstract, characters 431–619 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

The pale-green phenotype of MEm plants was absent in long days.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianae0
Treatment
growing in long dayse2
Outcome
pale-green phenotypee1
Comparator
short days (sd)e1

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis (Arabidopsis thaliana) plants overexpressing a maize (Zea mays) plastidic NADP-malic enzyme (MEm plants)”

✓ located verbatim in the source · abstract, characters 194–310 · show in text ↑
e1

“When grown in short days (sd), MEm plants developed a pale-green phenotype with decreased biomass and increased specific leaf area, with thin leaves having lower photosynthetic performance”

✓ located verbatim in the source · abstract, characters 431–619 · show in text ↑
e2

“These features were absent in plants growing in long days”

✓ located verbatim in the source · abstract, characters 621–678 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Rosettes of transgenic plants had very low levels of malate and fumarate in both short and long days.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianae0
Material
transgenic plantse3
Outcome
levels of malate and fumaratee3
Qualifier
very low levelse3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis (Arabidopsis thaliana) plants overexpressing a maize (Zea mays) plastidic NADP-malic enzyme (MEm plants)”

✓ located verbatim in the source · abstract, characters 194–310 · show in text ↑
e3

“The analysis of metabolite levels of rosettes from transgenic plants indicated similar disturbances in both sd and long days, with very low levels of malate and fumarate”

✓ located verbatim in the source · abstract, characters 680–849 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In the wild type, respiration at the end of the night shifted from carbohydrates to organic acids as the main substrates.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianae0
Material
wild typee4
Outcome
shift from carbohydrates to organic acids as the main substrates for respiratione4
Qualifier
by the end of the nighte4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis (Arabidopsis thaliana) plants overexpressing a maize (Zea mays) plastidic NADP-malic enzyme (MEm plants)”

✓ located verbatim in the source · abstract, characters 194–310 · show in text ↑
e4

“Determinations of the respiratory quotient by the end of the night indicated a shift from carbohydrates to organic acids as the main substrates for respiration in the wild type, while MEm plants use more reduced compounds, like fatty acids and proteins, to fuel respiration”

✓ located verbatim in the source · abstract, characters 851–1124 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

MEm plants used more reduced compounds, such as fatty acids and proteins, to fuel respiration at the end of the night.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianae0
Material
MEm plantse4
Compound
fatty acids and proteinse4
Outcome
reduced compoundse4
Qualifier
to fuel respiratione4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis (Arabidopsis thaliana) plants overexpressing a maize (Zea mays) plastidic NADP-malic enzyme (MEm plants)”

✓ located verbatim in the source · abstract, characters 194–310 · show in text ↑
e4

“Determinations of the respiratory quotient by the end of the night indicated a shift from carbohydrates to organic acids as the main substrates for respiration in the wild type, while MEm plants use more reduced compounds, like fatty acids and proteins, to fuel respiration”

✓ located verbatim in the source · abstract, characters 851–1124 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The alterations in short-day MEm plants are a consequence of impaired carbon skeleton supply during a long dark period.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianae0
Outcome
alterations observed in sd MEm plantse5
Qualifier
impairment in the supply of carbon skeletons during a long dark periode5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis (Arabidopsis thaliana) plants overexpressing a maize (Zea mays) plastidic NADP-malic enzyme (MEm plants)”

✓ located verbatim in the source · abstract, characters 194–310 · show in text ↑
e5

“It is concluded that the alterations observed in sd MEm plants are a consequence of impairment in the supply of carbon skeletons during a long dark period”

✓ located verbatim in the source · abstract, characters 1126–1280 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

The end-of-night carbon starvation phenotype suggests a physiological role for C4 acids that may be constitutive in plants.

Taxon
Arabidopsis (Arabidopsis thaliana)Arabidopsis thalianae0
Compound
C(4) acidse6
Outcome
a physiological role of the C(4) acidse6
Qualifier
may be a constitutive function in plantse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis (Arabidopsis thaliana) plants overexpressing a maize (Zea mays) plastidic NADP-malic enzyme (MEm plants)”

✓ located verbatim in the source · abstract, characters 194–310 · show in text ↑
e6

“This carbon starvation phenotype observed at the end of the night demonstrates a physiological role of the C(4) acids, which may be a constitutive function in plants”

✓ located verbatim in the source · abstract, characters 1282–1447 · show in text ↑

overexpression · physiology: photosynthesis · Arabidopsis thaliana (thale cress)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

overexpression · growth · Arabidopsis thaliana (thale cress)Positive and negative results

30 papers: 15 positive, 15 negative or no effect

14 papers in the same direction as this paper · 15 in the opposite direction

  1. positive
  2. positive
  3. positive

26 papers more in this group

See all 30 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.