Paper · 2012 · Annals of Microbiology

Characterization and identification of compost bacteria based on 16S rRNA gene sequencing

Rifat Hayat; Rizwan Ali Sheirdil; Muhammad Iftikhar-ul-Hassan; et al.

10
claims
19
verbatim quotes
28
citations
4
research areas
✓
Open access

Abstract

The aim of this study was to isolate and characterize bacteria from the compost of fruit and vegetable waste (FVW) for plant growth-promoting (PGP) activities and investigate the pro-active influence of bacterial isolates on wheat growth. Fourteen bacterial strains (RHC-1 to RHC-14) were isolated and purified in tryptic soya agar (TSA). In addition to being biochemically characterized, these bacterial strains were also tested for their PGP traits, such as phosphate (P)-solubilization, nif H gene amplification, indole-3-acetic acid (IAA) quantification and the production of ammonia, oxidase and catalase. Based on 16S rRNA gene sequencing, these bacterial strains were identified as belonging to species of Bacillus , Lysinibacillus , Lysobacter , Staphylococcus , Enterobacter , Pseudomonas and Serratia . All bacterial strains solubilized tri-calcium phosphate and produced IAA. Two bacterial strains RHC-8 ( Enterobacter sp.) and RHC-13 ( Pseudomonas sp.) solubilized the maximum amount of tri-calcium phosphate, i.e. 486 and 464 μg/ml, respectively. P-solubilization was associated with a significant drop in the pH of the broth culture from an initial pH of 7 to pH 4.43. In addition to P-solubilization and IAA production, six bacterial strains also carried the nif H gene and were further evaluated for their effect on wheat ( Triticum aestivum ) growth under controlled conditions. All six bacterial strains enhanced wheat growth as compared to uninoculated control plants. Two of the bacterial strains, RHC-8 and RHC-13, identified as Enterobacter aerogenes and Pseudomonas brenneri , respectively, were assessed as potential PGP rhizobacteria due to exhibiting characteristics of four or more PGP traits and enhancing wheat growth though their specific mechanism of action.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

All six bacterial strains enhanced wheat growth compared with uninoculated control plants.

Treatment
six bacterial strainse2
Outcome
wheat growthe2
Direction
enhancede2
Comparator
uninoculated control plantse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e2

“All six bacterial strains enhanced wheat growth as compared to uninoculated control plants”

✓ located verbatim in the source · abstract, characters 1396–1486 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Strain RHC-8 (Enterobacter sp.) solubilized the maximum amount of tri-calcium phosphate, 486 μg/ml.

Interactor
Enterobacter sp.Enterobactere3other
Outcome
solubilized the maximum amount of tri-calcium phosphatee3
Value
486e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Enterobacter
Enterobacter · Interactor · picture of the genus (one of its species)Public domain · Wikimedia Commons ↗

Verbatim

e1

“investigate the pro-active influence of bacterial isolates on wheat growth”

✓ located verbatim in the source · abstract, characters 163–237 · show in text ↑
e3

“Two bacterial strains RHC-8 ( Enterobacter sp.) and RHC-13 ( Pseudomonas sp.) solubilized the maximum amount of tri-calcium phosphate, i.e. 486 and 464 μg/ml, respectively”

✓ located verbatim in the source · abstract, characters 887–1058 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Strain RHC-13 (Pseudomonas sp.) solubilized the maximum amount of tri-calcium phosphate, 464 μg/ml.

Interactor
Pseudomonas sp.Pseudomonase3other
Outcome
solubilized the maximum amount of tri-calcium phosphatee3
Value
464e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas
Pseudomonas · Interactor · picture of the genus (one of its species)CDC · Public domain · Wikimedia Commons ↗

Verbatim

e1

“investigate the pro-active influence of bacterial isolates on wheat growth”

✓ located verbatim in the source · abstract, characters 163–237 · show in text ↑
e3

“Two bacterial strains RHC-8 ( Enterobacter sp.) and RHC-13 ( Pseudomonas sp.) solubilized the maximum amount of tri-calcium phosphate, i.e. 486 and 464 μg/ml, respectively”

✓ located verbatim in the source · abstract, characters 887–1058 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

All bacterial strains solubilized tri-calcium phosphate and produced IAA.

Outcome
solubilized tri-calcium phosphate and produced IAAe4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“investigate the pro-active influence of bacterial isolates on wheat growth”

✓ located verbatim in the source · abstract, characters 163–237 · show in text ↑
e4

“All bacterial strains solubilized tri-calcium phosphate and produced IAA”

✓ located verbatim in the source · abstract, characters 813–885 · show in text ↑
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

P-solubilization was associated with a significant drop in broth pH from an initial pH of 7 to pH 4.43.

Treatment
P-solubilizatione5
Outcome
pH of the broth culturee5
Direction
drope5
Value
pH 4.43e5
Comparator
an initial pH of 7e5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“investigate the pro-active influence of bacterial isolates on wheat growth”

✓ located verbatim in the source · abstract, characters 163–237 · show in text ↑
e5

“P-solubilization was associated with a significant drop in the pH of the broth culture from an initial pH of 7 to pH 4.43”

✓ located verbatim in the source · abstract, characters 1060–1181 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Six bacterial strains carried the nif H gene.

Gene
nif He6
Outcome
carried the nif H genee6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“investigate the pro-active influence of bacterial isolates on wheat growth”

✓ located verbatim in the source · abstract, characters 163–237 · show in text ↑
e6

“six bacterial strains also carried the nif H gene”

✓ located verbatim in the source · abstract, characters 1235–1284 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

Strains RHC-8 and RHC-13 were identified as Enterobacter aerogenes and Pseudomonas brenneri.

Interactor
Enterobacter aerogenesKlebsiella aerogenese7other
Second interactor
Pseudomonas brenneriPseudomonas brennerie7other
Outcome
identified ase7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Klebsiella aerogenes
Klebsiella aerogenes · InteractorRiraq25 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“investigate the pro-active influence of bacterial isolates on wheat growth”

✓ located verbatim in the source · abstract, characters 163–237 · show in text ↑
e7

“Two of the bacterial strains, RHC-8 and RHC-13, identified as Enterobacter aerogenes and Pseudomonas brenneri , respectively”

✓ located verbatim in the source · abstract, characters 1488–1612 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Isolates identified by 16S rRNA sequencing as Bacillus, Lysinibacillus and Lysobacter.

Interactor
Bacillus , Lysinibacillus , Lysobactere0other
Outcome
identified as belonging to species ofe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“investigate the pro-active influence of bacterial isolates on wheat growth”

✓ located verbatim in the source · abstract, characters 163–237 · show in text ↑
e0

“Based on 16S rRNA gene sequencing, these bacterial strains were identified as belonging to species of Bacillus , Lysinibacillus , Lysobacter , Staphylococcus , Enterobacter , Pseudomonas and Serratia”

✓ located verbatim in the source · abstract, characters 611–810 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Isolates identified by 16S rRNA sequencing as Staphylococcus, Enterobacter and Pseudomonas.

Interactor
Staphylococcus , Enterobacter , PseudomonasPseudomonasEnterobacterStaphylococcuse0other
Outcome
identified as belonging to species ofe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas
Pseudomonas · Interactor · picture of the genus (one of its species)CDC · Public domain · Wikimedia Commons ↗
Enterobacter
Enterobacter · Interactor · picture of the genus (one of its species)Public domain · Wikimedia Commons ↗
Staphylococcus
Staphylococcus · Interactor · picture of the genus (one of its species)Photo Credit: Janice Carr Content Providers(s): CDC/ Matthew J. Arduino, DRPH; Janice Carr · Public domain · Wikimedia Commons ↗

Verbatim

e1

“investigate the pro-active influence of bacterial isolates on wheat growth”

✓ located verbatim in the source · abstract, characters 163–237 · show in text ↑
e0

“Based on 16S rRNA gene sequencing, these bacterial strains were identified as belonging to species of Bacillus , Lysinibacillus , Lysobacter , Staphylococcus , Enterobacter , Pseudomonas and Serratia”

✓ located verbatim in the source · abstract, characters 611–810 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

An isolate identified by 16S rRNA sequencing as Serratia.

Interactor
Serratiae0other
Outcome
identified as belonging to species ofe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“investigate the pro-active influence of bacterial isolates on wheat growth”

✓ located verbatim in the source · abstract, characters 163–237 · show in text ↑
e0

“Based on 16S rRNA gene sequencing, these bacterial strains were identified as belonging to species of Bacillus , Lysinibacillus , Lysobacter , Staphylococcus , Enterobacter , Pseudomonas and Serratia”

✓ located verbatim in the source · abstract, characters 611–810 · show in text ↑

inoculation · growth · Triticum aestivum (wheat)Positive and negative results

532 papers: 476 positive, 56 negative or no effect

475 papers in the same direction as this paper · 55 in the opposite direction · 1 reporting no difference from an alternative

  1. positive
  2. no effect
  3. no effect

528 papers more in this group

See all 532 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.