Paper · 2011 · PLANT PHYSIOLOGY

The AP2/ERF Transcription Factor AtERF73/HRE1 Modulates Ethylene Responses during Hypoxia in Arabidopsis

Chin-Ying Yang; Fu-Chiun Hsu; Jin-Ping Li; et al.

11
claims
21
verbatim quotes
213
citations
2
research areas
✓
Open access · cc-by

Abstract

A number of APETALA2 (AP2)/ETHYLENE RESPONSE FACTOR (ERF) genes have been shown to function in abiotic and biotic stress responses, and these genes are often induced by multiple stresses. We report here the characterization of an AP2/ERF gene in Arabidopsis (Arabidopsis thaliana) that is specifically induced during hypoxia. We show that under normoxic conditions, the expression of AtERF73/HRE1 can be induced by exogenous addition of 1-aminocyclopropane-1-carboxylic acid and that a combination of hypoxia and 1-aminocyclopropane-1-carboxylic acid results in hyperinduction of AtERF73/HRE1 expression. In addition, hypoxic induction of AtERF73/HRE1 is reduced but not completely abolished in ethylene-insensitive mutants and in the presence of inhibitors of ethylene biosynthesis and responses. These results suggest that, in addition to ethylene, an ethylene-independent signal is also required to mediate hypoxic induction of AtERF73/HRE1. To assess the role of AtERF73/HRE1, we generated three independent RNA interference (RNAi) knockdown lines of AtERF73/HRE1. Under normoxic conditions, the AtERF73/HRE1-RNAi seedlings displayed increased ethylene sensitivity and exaggerated triple responses, indicating that AtERF73/HRE1 might play a negative regulatory role in modulating ethylene responses. Gas chromatography analyses showed that the production of ethylene was similar between wild-type and RNAi lines under hypoxia. Quantitative reverse transcription-polymerase chain reaction analyses showed that hypoxia-inducible genes could be affected by AtERF73/HRE1-RNAi lines in two different ways: hypoxic induction of glycolytic and fermentative genes was reduced, whereas induction of a number of peroxidase and cytochrome P450 genes was increased. Taken together, our results show that AtERF73/HRE1 is involved in modulating ethylene responses under both normoxia and hypoxia.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

An AP2/ERF gene in Arabidopsis is specifically induced during hypoxia.

Taxon
ArabidopsisArabidopsise0
Treatment
hypoxiae0
Gene
AP2/ERF genee0
Outcome
specifically inducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“an AP2/ERF gene in Arabidopsis (Arabidopsis thaliana) that is specifically induced during hypoxia”

✓ located verbatim in the source · abstract, characters 227–324 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Under normoxia, AtERF73/HRE1 expression was induced by exogenous 1-aminocyclopropane-1-carboxylic acid.

Taxon
ArabidopsisArabidopsist0
Treatment
exogenous addition of 1-aminocyclopropane-1-carboxylic acide1
Gene
AtERF73/HRE1e1
Outcome
expressione1
Direction
inducede1
Setting
normoxic conditionse1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 93–104 · show in text ↑
e1

“under normoxic conditions, the expression of AtERF73/HRE1 can be induced by exogenous addition of 1-aminocyclopropane-1-carboxylic acid”

✓ located verbatim in the source · abstract, characters 339–474 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Combined hypoxia and 1-aminocyclopropane-1-carboxylic acid resulted in hyperinduction of AtERF73/HRE1 expression.

Taxon
ArabidopsisArabidopsist0
Treatment
combination of hypoxia and 1-aminocyclopropane-1-carboxylic acide2
Gene
AtERF73/HRE1e2
Outcome
expressione2
Direction
hyperinductione2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 93–104 · show in text ↑
e2

“a combination of hypoxia and 1-aminocyclopropane-1-carboxylic acid results in hyperinduction of AtERF73/HRE1 expression”

✓ located verbatim in the source · abstract, characters 484–603 · show in text ↑
Observationobservedoriginal resultmixedmeasured

Claim · model-written summary

Hypoxic induction of AtERF73/HRE1 was reduced but not completely abolished in ethylene-insensitive mutants.

Taxon
ArabidopsisArabidopsist0
Material
ethylene-insensitive mutantse3
Gene
AtERF73/HRE1e3
Outcome
hypoxic inductione3
Direction
reducede3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 93–104 · show in text ↑
e3

“hypoxic induction of AtERF73/HRE1 is reduced but not completely abolished in ethylene-insensitive mutants”

✓ located verbatim in the source · abstract, characters 618–723 · show in text ↑
Intervention effectobservedoriginal resultmixedmeasured

Claim · model-written summary

Hypoxic induction of AtERF73/HRE1 was reduced but not completely abolished in the presence of inhibitors of ethylene biosynthesis and responses.

Taxon
ArabidopsisArabidopsist0
Treatment
inhibitors of ethylene biosynthesis and responsese4
Gene
AtERF73/HRE1e4
Outcome
hypoxic inductione4
Direction
reducede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 93–104 · show in text ↑
e4

“hypoxic induction of AtERF73/HRE1 is reduced but not completely abolished in ethylene-insensitive mutants and in the presence of inhibitors of ethylene biosynthesis and responses”

✓ located verbatim in the source · abstract, characters 618–796 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

In addition to ethylene, an ethylene-independent signal is also required to mediate hypoxic induction of AtERF73/HRE1.

Taxon
ArabidopsisArabidopsist0
Gene
AtERF73/HRE1e5
Compound
ethylenee5
Outcome
hypoxic inductione5
Qualifier
ethylene-independent signale5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 93–104 · show in text ↑
e5

“in addition to ethylene, an ethylene-independent signal is also required to mediate hypoxic induction of AtERF73/HRE1”

✓ located verbatim in the source · abstract, characters 826–943 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Under normoxia, AtERF73/HRE1-RNAi seedlings displayed increased ethylene sensitivity and exaggerated triple responses.

Taxon
ArabidopsisArabidopsist0
Organ / stage
seedlingse6
Treatment
AtERF73/HRE1-RNAie6
Gene
AtERF73/HRE1e6
Outcome
ethylene sensitivity and exaggerated triple responsese6
Direction
increasede6
Setting
normoxic conditionse6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 93–104 · show in text ↑
e6

“Under normoxic conditions, the AtERF73/HRE1-RNAi seedlings displayed increased ethylene sensitivity and exaggerated triple responses”

✓ located verbatim in the source · abstract, characters 1069–1201 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

AtERF73/HRE1 might play a negative regulatory role in modulating ethylene responses.

Taxon
ArabidopsisArabidopsist0
Gene
AtERF73/HRE1e7
Outcome
ethylene responsese7
Qualifier
negative regulatory rolee7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 93–104 · show in text ↑
e7

“indicating that AtERF73/HRE1 might play a negative regulatory role in modulating ethylene responses”

✓ located verbatim in the source · abstract, characters 1203–1302 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Ethylene production was similar between wild-type and RNAi lines under hypoxia.

Taxon
ArabidopsisArabidopsist0
Material
RNAi linese0
Treatment
hypoxiae0
Outcome
production of ethylenee0
Direction
similare0
Comparator
wild-typee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 93–104 · show in text ↑
e0

“the production of ethylene was similar between wild-type and RNAi lines under hypoxia”

✓ located verbatim in the source · abstract, characters 1344–1429 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In AtERF73/HRE1-RNAi lines, hypoxic induction of glycolytic and fermentative genes was reduced.

Taxon
ArabidopsisArabidopsist0
Material
AtERF73/HRE1-RNAi linese1
Gene
glycolytic and fermentative genese1
Outcome
hypoxic induction of glycolytic and fermentative genese1
Direction
reducede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 93–104 · show in text ↑
e1

“hypoxia-inducible genes could be affected by AtERF73/HRE1-RNAi lines in two different ways: hypoxic induction of glycolytic and fermentative genes was reduced”

✓ located verbatim in the source · abstract, characters 1513–1671 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In AtERF73/HRE1-RNAi lines, induction of a number of peroxidase and cytochrome P450 genes was increased.

Taxon
ArabidopsisArabidopsist0
Material
AtERF73/HRE1-RNAi linese2
Gene
peroxidase and cytochrome P450 genese2
Outcome
induction of a number of peroxidase and cytochrome P450 genese2
Direction
increasede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 93–104 · show in text ↑
e2

“hypoxia-inducible genes could be affected by AtERF73/HRE1-RNAi lines in two different ways: hypoxic induction of glycolytic and fermentative genes was reduced, whereas induction of a number of peroxidase and cytochrome P450 genes was increased”

✓ located verbatim in the source · abstract, characters 1513–1756 · show in text ↑

1-aminocyclopropanecarboxylic acid · molecular: expression · ArabidopsisPositive and negative results

10 papers: 6 positive, 4 negative or no effect

5 papers in the same direction as this paper · 4 in the opposite direction

  1. negative
  2. negative
  3. negative

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flooding · molecular: expression · ArabidopsisPositive and negative results

11 papers: 6 positive, 5 negative or no effect

5 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. negative
  3. negative

7 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.