Paper · 2004 · FEMS Microbiology Ecology

Structure and activity of the nitrate-reducing community in the rhizosphere of Lolium perenne and Trifolium repens under long-term elevated atmospheric pCO2

Kathrin Deiglmayr; Laurent Philippot; Ueli A. Hartwig; et al.

7
claims
14
verbatim quotes
85
citations
2
research areas
✓
Open access

Abstract

Rhizosphere soil was sampled in monocultures of Lolium perenne and Trifolium repens in June and October 2002, at two different nitrogen fertilisation levels (14 and 56 g N m(-2) year(-1)) and under two pCO(2) atmospheres (360 and 600 ppmv) at the Swiss FACE (Free Air Carbon dioxide Enrichment) site. Directly extracted soil DNA was analysed with restriction fragment length polymorphism (PCR-RFLP) by use of degenerated primers for the narG gene encoding the active site of the membrane-bound nitrate reductase. The corresponding enzyme activity of the nitrate reductase was determined colorimetrically after 24 h of anaerobic incubation. The narG PCR-RFLP fingerprints showed that the structure of the nitrate-reducing community was primarily affected by season and pH of the sampling site, whereas CO(2) enrichment, plant species or fertiliser treatment had no apparent effect. In contrast, the nitrate reductase activity responded to N fertilisation, CO(2) enrichment and plant species in October, whereas in June drought stress most likely kept the enzyme activity at a low level in all treatments. Apparently, the respiratory nitrate-reducing community adapted to different treatments primarily by altered enzyme activity.

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Claims 7

Associationobservedoriginal resultmeasured

Claim · model-written summary

Season and pH of the sampling site primarily affected the structure of the nitrate-reducing community in the rhizosphere.

Taxon
Lolium perenne and Trifolium repensTrifolium repensLolium perennee1
Outcome
structure of the nitrate-reducing communitye2
Setting
sampling sitee2

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium repens
Trifolium repens · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Lolium perenne
Lolium perenne · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Rhizosphere soil was sampled in monocultures of Lolium perenne and Trifolium repens in June and October 2002”

✓ located verbatim in the source · abstract, characters 0–108 · show in text ↑
e2

“the structure of the nitrate-reducing community was primarily affected by season and pH of the sampling site, whereas CO(2) enrichment, plant species or fertiliser treatment had no apparent effect”

✓ located verbatim in the source · abstract, characters 683–879 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Elevated CO2, plant species and fertiliser treatment had no apparent effect on the structure of the nitrate-reducing community.

Taxon
Lolium perenne and Trifolium repensTrifolium repensLolium perennee1
Treatment
CO(2) enrichment, plant species or fertiliser treatmente2
Outcome
structure of the nitrate-reducing communitye2
Direction
no apparent effecte2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium repens
Trifolium repens · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Lolium perenne
Lolium perenne · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Rhizosphere soil was sampled in monocultures of Lolium perenne and Trifolium repens in June and October 2002”

✓ located verbatim in the source · abstract, characters 0–108 · show in text ↑
e2

“the structure of the nitrate-reducing community was primarily affected by season and pH of the sampling site, whereas CO(2) enrichment, plant species or fertiliser treatment had no apparent effect”

✓ located verbatim in the source · abstract, characters 683–879 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Nitrate reductase activity responded to N fertilisation in October.

Taxon
Lolium perenne and Trifolium repensTrifolium repensLolium perennee1
Treatment
N fertilisatione3
Outcome
nitrate reductase activitye3
Qualifier
in Octobere3

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium repens
Trifolium repens · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Lolium perenne
Lolium perenne · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Rhizosphere soil was sampled in monocultures of Lolium perenne and Trifolium repens in June and October 2002”

✓ located verbatim in the source · abstract, characters 0–108 · show in text ↑
e3

“In contrast, the nitrate reductase activity responded to N fertilisation, CO(2) enrichment and plant species in October”

✓ located verbatim in the source · abstract, characters 881–1000 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Elevated CO2 enrichment was associated with changed nitrate reductase activity in October.

Taxon
Lolium perenne and Trifolium repensTrifolium repensLolium perennee1
Treatment
CO(2) enrichmente3
Outcome
nitrate reductase activitye3
Qualifier
in Octobere3

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium repens
Trifolium repens · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Lolium perenne
Lolium perenne · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Rhizosphere soil was sampled in monocultures of Lolium perenne and Trifolium repens in June and October 2002”

✓ located verbatim in the source · abstract, characters 0–108 · show in text ↑
e3

“In contrast, the nitrate reductase activity responded to N fertilisation, CO(2) enrichment and plant species in October”

✓ located verbatim in the source · abstract, characters 881–1000 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Plant species was associated with changed nitrate reductase activity in October.

Taxon
Lolium perenne and Trifolium repensTrifolium repensLolium perennee1
Treatment
plant speciese3
Outcome
nitrate reductase activitye3
Qualifier
in Octobere3

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium repens
Trifolium repens · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Lolium perenne
Lolium perenne · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Rhizosphere soil was sampled in monocultures of Lolium perenne and Trifolium repens in June and October 2002”

✓ located verbatim in the source · abstract, characters 0–108 · show in text ↑
e3

“In contrast, the nitrate reductase activity responded to N fertilisation, CO(2) enrichment and plant species in October”

✓ located verbatim in the source · abstract, characters 881–1000 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Drought stress most likely kept nitrate reductase activity at a low level in all treatments in June.

Taxon
Lolium perenne and Trifolium repensTrifolium repensLolium perennee1
Treatment
drought stresse4
Outcome
enzyme activitye4
Qualifier
at a low levele4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium repens
Trifolium repens · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Lolium perenne
Lolium perenne · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Rhizosphere soil was sampled in monocultures of Lolium perenne and Trifolium repens in June and October 2002”

✓ located verbatim in the source · abstract, characters 0–108 · show in text ↑
e4

“in June drought stress most likely kept the enzyme activity at a low level in all treatments”

✓ located verbatim in the source · abstract, characters 1010–1102 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The respiratory nitrate-reducing community adapted to the treatments primarily by altered enzyme activity.

Taxon
Lolium perenne and Trifolium repensTrifolium repensLolium perennee1
Outcome
adapted to different treatmentse5
Qualifier
altered enzyme activitye5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium repens
Trifolium repens · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Lolium perenne
Lolium perenne · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Rhizosphere soil was sampled in monocultures of Lolium perenne and Trifolium repens in June and October 2002”

✓ located verbatim in the source · abstract, characters 0–108 · show in text ↑
e5

“Apparently, the respiratory nitrate-reducing community adapted to different treatments primarily by altered enzyme activity”

✓ located verbatim in the source · abstract, characters 1104–1227 · show in text ↑

co2 · nutrient: content · Trifolium repens (white clover)Positive and negative results

3 papers: 1 positive, 2 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
See all 3 papers →

co2 · nutrient: content · Lolium perenne (perennial ryegrass)Positive and negative results

4 papers: 2 positive, 2 negative or no effect

1 paper in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. positive
  3. negative
See all 4 papers →

fertilization · nutrient: content · Trifolium repens (white clover)Positive and negative results

6 papers: 3 positive, 3 negative or no effect

2 papers in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. positive
  3. positive

2 papers more in this group

See all 6 papers →

fertilization · nutrient: content · Lolium perenne (perennial ryegrass)Positive and negative results

17 papers: 12 positive, 5 negative or no effect

4 papers in the same direction as this paper · 12 in the opposite direction

  1. positive
  2. positive
  3. positive

13 papers more in this group

See all 17 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.