Paper · 2004 · Proceedings of the National Academy of Sciences

An Arabidopsis homeodomain transcription factor gene, HOS9 , mediates cold tolerance through a CBF-independent pathway

Jianhua Zhu; Huazhong Shi; Byeong-ha Lee; et al.

14
claims
27
verbatim quotes
285
citations
3
research areas
✓
Open access

Abstract

To investigate essential components mediating stress signaling in plants, we initiated a large-scale stress response screen using Arabidopsis plants carrying the firefly luciferase reporter gene under the control of the stress-responsive RD29A promoter. Here we report the identification and characterization of a mutant, hos9-1 (for high expression of osmotically responsive genes), in which the reporter construct was hyperactivated by low temperature, but not by abscisic acid or salinity stress. The mutants grow more slowly, and flower later, than do wild-type plants and are more sensitive to freezing, both before and after acclimation, than the wild-type plants. The HOS9 gene encodes a putative homeodomain transcription factor that is localized to the nucleus. HOS9 is constitutively expressed and not further induced by cold stress. Cold treatment increased the level of transcripts of the endogenous RD29A, and some other stress-responsive genes, to a higher level in hos9-1 than in wild-type plants. However, the C repeat/dehydration responsive element-binding factor (CBF) transcription factor genes that mediate a part of cold acclimation in Arabidopsis did not have their response to cold altered by the hos9-1 mutation. Correspondingly, microarray analysis showed that none of the genes affected by the hos9-1 mutation are controlled by the CBF family. Together, these results suggest that HOS9 is important for plant growth and development, and for a part of freezing tolerance, by affecting the activity of genes independent of the CBF pathway.

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Claims 14

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Low temperature hyperactivated the RD29A reporter in hos9-1.

Taxon
ArabidopsisArabidopsist0
Treatment
low temperaturee0
Outcome
reporter constructe0
Direction
hyperactivatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the reporter construct was hyperactivated by low temperature, but not by abscisic acid or salinity stress”

✓ located verbatim in the source · abstract, characters 393–498 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Abscisic acid did not hyperactivate the reporter in hos9-1.

Taxon
ArabidopsisArabidopsist0
Treatment
abscisic acide0
Outcome
reporter constructe0
Direction
note0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the reporter construct was hyperactivated by low temperature, but not by abscisic acid or salinity stress”

✓ located verbatim in the source · abstract, characters 393–498 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Salinity stress did not hyperactivate the reporter in hos9-1.

Taxon
ArabidopsisArabidopsist0
Treatment
salinity stresse0
Outcome
reporter constructe0
Direction
note0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the reporter construct was hyperactivated by low temperature, but not by abscisic acid or salinity stress”

✓ located verbatim in the source · abstract, characters 393–498 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

hos9-1 mutants grew more slowly than wild type.

Taxon
ArabidopsisArabidopsist0
Outcome
growe0
Direction
more slowlye0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The mutants grow more slowly, and flower later, than do wild-type plants”

✓ located verbatim in the source · abstract, characters 500–572 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

hos9-1 mutants flowered later than wild type.

Taxon
ArabidopsisArabidopsist0
Outcome
flowere0
Direction
latere0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The mutants grow more slowly, and flower later, than do wild-type plants”

✓ located verbatim in the source · abstract, characters 500–572 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

hos9-1 mutants were more sensitive to freezing before acclimation than wild type.

Taxon
ArabidopsisArabidopsist0
Outcome
sensitive to freezinge0
Direction
more sensitivee0
Qualifier
beforee0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“are more sensitive to freezing, both before and after acclimation, than the wild-type plants”

✓ located verbatim in the source · abstract, characters 577–669 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

hos9-1 mutants were more sensitive to freezing after acclimation than wild type.

Taxon
ArabidopsisArabidopsist0
Outcome
sensitive to freezinge0
Direction
more sensitivee0
Qualifier
after acclimatione0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“are more sensitive to freezing, both before and after acclimation, than the wild-type plants”

✓ located verbatim in the source · abstract, characters 577–669 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

HOS9 encodes a putative nuclear homeodomain transcription factor.

Taxon
ArabidopsisArabidopsist0
Gene
HOS9e0
Outcome
putative homeodomain transcription factor that is localized to the nucleuse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The HOS9 gene encodes a putative homeodomain transcription factor that is localized to the nucleus”

✓ located verbatim in the source · abstract, characters 671–769 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

HOS9 is constitutively expressed and not further induced by cold stress.

Taxon
ArabidopsisArabidopsist0
Treatment
cold stresse0
Gene
HOS9e0
Outcome
HOS9 is constitutively expressede0
Direction
not further inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“HOS9 is constitutively expressed and not further induced by cold stress”

✓ located verbatim in the source · abstract, characters 771–842 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Cold treatment raised endogenous RD29A transcript levels more in hos9-1 than in wild type.

Taxon
ArabidopsisArabidopsist0
Treatment
Cold treatmente0
Gene
RD29Ae0
Outcome
level of transcripts of the endogenous RD29Ae0
Direction
highere0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cold treatment increased the level of transcripts of the endogenous RD29A, and some other stress-responsive genes, to a higher level in hos9-1 than in wild-type plants”

✓ located verbatim in the source · abstract, characters 844–1011 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Cold treatment raised transcripts of other stress-responsive genes more in hos9-1 than in wild type.

Taxon
ArabidopsisArabidopsist0
Treatment
Cold treatmente0
Gene
other stress-responsive genese0
Outcome
level of transcriptse0
Direction
highere0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cold treatment increased the level of transcripts of the endogenous RD29A, and some other stress-responsive genes, to a higher level in hos9-1 than in wild-type plants”

✓ located verbatim in the source · abstract, characters 844–1011 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

The hos9-1 mutation did not alter the cold response of CBF genes.

Taxon
ArabidopsisArabidopsise0
Treatment
hos9-1 mutatione0
Gene
C repeat/dehydration responsive element-binding factor (CBF) transcription factor genese0
Outcome
response to colde0
Direction
did not have their response to cold alterede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the C repeat/dehydration responsive element-binding factor (CBF) transcription factor genes that mediate a part of cold acclimation in Arabidopsis did not have their response to cold altered by the hos9-1 mutation”

✓ located verbatim in the source · abstract, characters 1022–1235 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

None of the genes affected by hos9-1 were controlled by the CBF family.

Taxon
ArabidopsisArabidopsist0
Gene
CBF familye0
Outcome
none of the genes affected by the hos9-1 mutation are controlled by the CBF familye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“none of the genes affected by the hos9-1 mutation are controlled by the CBF family”

✓ located verbatim in the source · abstract, characters 1286–1368 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer that HOS9 supports growth, development and some freezing tolerance through CBF-independent gene activity.

Taxon
ArabidopsisArabidopsist0
Gene
HOS9e0
Outcome
plant growth and development, and for a part of freezing tolerancee0
Qualifier
affecting the activity of genes independent of the CBF pathwaye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“HOS9 is important for plant growth and development, and for a part of freezing tolerance, by affecting the activity of genes independent of the CBF pathway”

✓ located verbatim in the source · abstract, characters 1407–1562 · show in text ↑
t0

“An Arabidopsis”

✓ located verbatim in the source · title, characters 0–14 · show in text ↑

cold · molecular: expression · ArabidopsisPositive and negative results

39 papers: 18 positive, 21 negative or no effect

20 papers in the same direction as this paper · 18 in the opposite direction

  1. positive
  2. no effect
  3. negative

35 papers more in this group

See all 39 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.