Paper · 1994 · The Plant Journal

Separate cis sequences and trans factors direct metabolic and developmental regulation of a potato tuber storage protein gene

Claire Grierson; Jian‐Sheng Du; Marta De Torres Zabala; et al.

6
claims
14
verbatim quotes
191
citations
2
research areas
✓
Open access

Abstract

The expression of genes encoding patatin, a major tuber protein, is highly tissue-specific but is also modulated by exogenous sucrose. The patterns of transcription observed in potato plants could be due to mechanisms conferring tuber-specificity or they could reflect the concentrations of sucrose found in different tissues. To distinguish between these possibilities, a detailed examination was made of the function of a region of the promoter previously implicated in conferring tissue-specific and sucrose-inducible expression. Internal deletions of this region revealed three separate functional domains regulating expression. The B repeat region acted as a positive activator of transcription in the tuber and was also responsible for a degree of sucrose-inducibility. The distal region of the A repeat repressed transcription in leaf and tuber tissue, while the proximal region of the A repeat was able to confer sucrose-responsiveness. Each of these regions specifically bound nuclear proteins which may be putative transcription factors involved in conferring these responses. The region found to confer sucrose-inducible expression was conserved among some other genes that are also regulated by exogenous sucrose.

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Claims 6

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The B repeat region acted as a positive activator of transcription in the potato tuber.

Organ / stage
tubere1
Treatment
Internal deletionse0
Gene
B repeat regione1
Outcome
transcription in the tubere1
Direction
increaseinferrede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

t0

“potato tuber storage protein gene”

✓ located verbatim in the source · title, characters 92–125 · show in text ↑
e0

“Internal deletions of this region revealed three separate functional domains regulating expression”

✓ located verbatim in the source · abstract, characters 533–631 · show in text ↑
e1

“The B repeat region acted as a positive activator of transcription in the tuber”

✓ located verbatim in the source · abstract, characters 633–712 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

The B repeat region was responsible for a degree of sucrose-inducibility of expression.

Gene
B repeat regione2
Compound
sucrosee2
Outcome
sucrose-inducibilitye2
Direction
increaseinferrede2
Qualifier
a degree ofe2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

t0

“potato tuber storage protein gene”

✓ located verbatim in the source · title, characters 92–125 · show in text ↑
e2

“The B repeat region acted as a positive activator of transcription in the tuber and was also responsible for a degree of sucrose-inducibility”

✓ located verbatim in the source · abstract, characters 633–774 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

The distal region of the A repeat repressed transcription in leaf and tuber tissue.

Organ / stage
leaf and tuber tissuee3
Treatment
Internal deletionse0
Gene
distal region of the A repeate3
Outcome
transcription in leaf and tuber tissuee3
Direction
repressede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

t0

“potato tuber storage protein gene”

✓ located verbatim in the source · title, characters 92–125 · show in text ↑
e0

“Internal deletions of this region revealed three separate functional domains regulating expression”

✓ located verbatim in the source · abstract, characters 533–631 · show in text ↑
e3

“The distal region of the A repeat repressed transcription in leaf and tuber tissue”

✓ located verbatim in the source · abstract, characters 776–858 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

The proximal region of the A repeat conferred sucrose-responsiveness.

Gene
proximal region of the A repeate4
Compound
sucrosee4
Outcome
sucrose-responsivenesse4
Direction
increaseinferrede4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

t0

“potato tuber storage protein gene”

✓ located verbatim in the source · title, characters 92–125 · show in text ↑
e4

“the proximal region of the A repeat was able to confer sucrose-responsiveness”

✓ located verbatim in the source · abstract, characters 866–943 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Each of the three regions specifically bound nuclear proteins.

Outcome
bound nuclear proteinse5
Qualifier
putative transcription factorse5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

t0

“potato tuber storage protein gene”

✓ located verbatim in the source · title, characters 92–125 · show in text ↑
e5

“Each of these regions specifically bound nuclear proteins which may be putative transcription factors involved in conferring these responses”

✓ located verbatim in the source · abstract, characters 945–1085 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The region conferring sucrose-inducible expression was conserved among some other sucrose-regulated genes.

Compound
sucrosee6
Outcome
was conserved among some other genese6
Qualifier
some other genes that are also regulated by exogenous sucrosee6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

t0

“potato tuber storage protein gene”

✓ located verbatim in the source · title, characters 92–125 · show in text ↑
e6

“The region found to confer sucrose-inducible expression was conserved among some other genes that are also regulated by exogenous sucrose”

✓ located verbatim in the source · abstract, characters 1087–1224 · show in text ↑

loss of function · molecular: expression · Solanum tuberosum (potato)Positive and negative results

17 papers: 6 positive, 11 negative or no effect

5 papers in the same direction as this paper · 11 in the opposite direction

  1. negative
  2. negative
  3. negative

13 papers more in this group

See all 17 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.