Paper · 2009 · Hereditas (Beijing)

Analysis of methylation-sensitive amplified polymorphism in wheat genome under the wheat leaf rust stress

Sheng-Jie FU; Hui WANG; Li-Na FENG; et al.

2
claims
4
verbatim quotes
6
citations
2
research areas
—
Not open access

Abstract

Intrinsic DNA methylation pattern is an integral component of the epigenetic network in many eukaryotes. DNA methylation plays an important role in regulating gene expression in eukaryotes. Biological stress in plant provides an inherent epigenetic driving force of evolution. Study of DNA methylation patterns arising from biological stress will help us fully understand the epigenetic regulation of gene expression and DNA methylation of biological functions. The wheat near-isogenic lines TcLr19 and TcLr41 were resistant to races THTT and TKTJ, respectively, and Thatcher is compatible in the interaction with Puccinia triticina THTT and TKTJ, respectively. By means of methylation-sensitive amplified polymorphism (MSAP) analysis, the patterns of cytosine methylation in TcLr19, TcLr41, and Thatcher inoculated with P. triticina THTT and TKTJ were compared with those of the untreated samples. All the DNA fragments, each representing a recognition site cleaved by each or both of isoschizomers, were amplified using 60 pairs of selective primers. The results indicated that there was no significant difference between the challenged and unchallenged plants at DNA methylation level. However, epigenetic difference between the near-isogenic line for wheat leaf rust resistance gene Lr41 and Thatcher was present.

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Claims 2

Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Inoculation with Puccinia triticina produced no significant difference in DNA methylation level between challenged and unchallenged wheat near-isogenic lines and Thatcher.

Material
TcLr19 and TcLr41e1
Treatment
inoculated with P. triticina THTT and TKTJe2
Interactor
Puccinia triticinaPuccinia triticinae1pathogen
Outcome
DNA methylation levele3
Direction
no significant differencee3
Comparator
untreated samplese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Puccinia triticina
Puccinia triticina · InteractorRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“The wheat near-isogenic lines TcLr19 and TcLr41 were resistant to races THTT and TKTJ, respectively, and Thatcher is compatible in the interaction with Puccinia triticina THTT and TKTJ, respectively”

✓ located verbatim in the source · abstract, characters 462–660 · show in text ↑
e2

“the patterns of cytosine methylation in TcLr19, TcLr41, and Thatcher inoculated with P. triticina THTT and TKTJ were compared with those of the untreated samples”

✓ located verbatim in the source · abstract, characters 736–897 · show in text ↑
e3

“there was no significant difference between the challenged and unchallenged plants at DNA methylation level”

✓ located verbatim in the source · abstract, characters 1080–1187 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Wheat near-isogenic line for leaf rust resistance gene Lr41 shows an epigenetic difference from Thatcher.

Material
near-isogenic linee4
Gene
Lr41e4
Outcome
epigenetic differencee4
Comparator
Thatchere4

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“However, epigenetic difference between the near-isogenic line for wheat leaf rust resistance gene Lr41 and Thatcher was present”

✓ located verbatim in the source · abstract, characters 1189–1316 · show in text ↑

Puccinia triticina · molecular: expression · Triticum aestivum (wheat)Positive and negative results

4 papers: 2 positive, 2 negative or no effect

1 paper in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. positive
  3. no effect
See all 4 papers →

inoculation · molecular: expression · Triticum aestivum (wheat)Positive and negative results

47 papers: 38 positive, 9 negative or no effect

8 papers in the same direction as this paper · 38 in the opposite direction

  1. positive
  2. positive
  3. positive

43 papers more in this group

See all 47 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.