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Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Models accounting for enviromic information increased genetic variance.

Taxon
alfalfa (Medicago sativa L.)Medicago sativae1
Treatment
models accounting to the enviromics informatione0
Outcome
genetic variancee0
Direction
increasee0

Not reportedComparator

Verbatim

e0

“models accounting to the enviromics information led to an increase of genetic variance and a decrease in the error variance”

✓ located verbatim in the source · abstract, characters 640–763
e1

“Breeding for dry matter yield and persistence in alfalfa (Medicago sativa L.)”

✓ located verbatim in the source · abstract, characters 0–77

Title

Идентификация математической модели в виде полиномиальной рекуррентной нейронной сети и настройка регуляторов электропривода с сериесным двигателем

И. А. Орловский Радіоелектроніка, інформатика, управління 2011. doi:10.1002/tpg2.20306

Other claims from this paper (11)
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Gene expression, enzyme activity and the fruit metabolome were modified in ascorbate oxidase RNAi tomato lines.

Treatment
RNA interferencee1
Outcome
gene expression, enzyme activity and the fruit metabolomee4
Direction
Modificationse4

Not reportedComparator

Verbatim

t0

“yield in tomato under water deficit”

✓ located verbatim in the source · title, characters 82–117
e1

“RNA interference was used to decrease ascorbate oxidase activity in tomato (Solanum lycopersicum L.)”

✓ located verbatim in the source · abstract, characters 268–368
e4

“Modifications in gene expression, enzyme activity and the fruit metabolome were coherent with the notion of the ascorbate oxidase RNAi lines showing altered sink strength”

✓ located verbatim in the source · abstract, characters 914–1084

Title

A diminution in ascorbate oxidase activity affects carbon allocation and improves yield in tomato under water deficit

CÉCILE GARCHERY; NOÉ GEST; PHUC T. DO; et al. Plant Cell & Environment 2012. doi:10.1111/j.1365-3040.2012.02564.x

Other claims from this paper (7)
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

The qSBN7 allele of FZP is associated with increased secondary branch and grain number in rice.

Material
qSBN7e3
Outcome
secondary branch and grain numbere4
Direction
increasede4

Verbatim

e1

“Secondary branch number per panicle plays a crucial role in regulating grain number and yield in rice”

✓ located verbatim in the source · abstract, characters 9–110
e3

“qSBN7 is a novel allele of FZP that causes an ∼56% decrease in its transcriptional level”

✓ located verbatim in the source · abstract, characters 533–621
e4

“leading to increased secondary branch and grain number, and reduced grain length”

✓ located verbatim in the source · abstract, characters 623–703

Title

A Novel Variation in the FRIZZLE PANICLE (FZP) Gene Promoter Improves Grain Number and Yield in Rice

Sheng-Shan Wang; Chia-Lin Chung; Kai-Yi Chen; et al. Genetics 2020. doi:10.1534/genetics.119.302862

Other claims from this paper (4)
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

The reduced height allele was associated with a increase in FE.

Gene
reduced height allelee0
Outcome
FEe0
Direction
increasee0

Verbatim

e0

“A major contributor to plant height was the Rht8 locus and the reduced height allele was associated with significant increase in grains per spike (GPS) and FE, and decrease in number of spikes per square meter and test weight”

✓ located verbatim in the source · abstract, characters 881–1106
t0

“wheat quality and yield related traits”

✓ located verbatim in the source · title, characters 34–72

Title

Genome wide genetic dissection of wheat quality and yield related traits and their relationship with grain shape and size traits in an elite × non-adapted bread wheat cross

Ajay Kumar; Eder E. Mantovani; Senay Simsek; et al. PLoS ONE 2019. doi:10.1371/journal.pone.0221826

Other claims from this paper (14)
Associationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

The upstream FZP deletion significantly increased secondary branch number in cultivated rice.

Material
cultivated ricee0
Gene
FZPe0
Outcome
number of secondary branchese0
Direction
enhancee0

Verbatim

e0

“A 4-bp tandem repeat deletion approximately 2.7 kb upstream of FZP may affect the binding activities of auxin response factors to the FZP promoter, decrease the expression level of FZP and significantly enhance the number of secondary branches and grain yield in cultivated rice.”

✓ located verbatim in the source · abstract, characters 566–845
t0

“rice domestication”

✓ located verbatim in the source · title, characters 115–133

Title

Variation in the regulatory region of FZP causes increases in secondary inflorescence branching and grain yield in rice domestication

Yongyu Huang; Shuangshuang Zhao; Yongcai Fu; et al. The Plant Journal 2018. doi:10.1111/tpj.14062

Other claims from this paper (5)
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

PDIL2-3 has a negative effect on cell proliferation in rice spikelet hulls, preventing DNA duplication and cell division.

Organ / stage
spikelet hullse1
Gene
PDIL2-3e1
Outcome
cell proliferatione1
Direction
decreaseinferrede1
Qualifier
preventing DNA duplication and cell divisione1

Verbatim

e1

“Further flow cytometric analysis validated that PDIL2-3 has a negative effect on cell proliferation , preventing DNA duplication and cell division in spikelet hulls”

✓ located verbatim in the source · abstract, characters 977–1141
e2

“Rice grain size and chalkiness are important traits that influence grain yield and quality”

✓ located verbatim in the source · abstract, characters 0–90

Title

PDIL2-3 encoding a protein disulfide isomerase-like enzyme is essential for grain yield and appearance quality in rice (Oryza sativa L.)

Xuelian Guo; Jiayi Song; Kun Xu; et al. The Crop Journal 2025. doi:10.1016/j.cj.2025.02.011

Other claims from this paper (9)
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

CRISPR disruption of four PK genes increased total starch.

Treatment
disruption of OsPK4, OsPK6, OsPK8, and OsPK10e0
Outcome
content of total starche0
Direction
increasee0
Comparator
WTe0

Verbatim

e0

“disruption of OsPK4, OsPK6, OsPK8, and OsPK10 through the CRISPR/Cas9 system showed an increase in the content of total starch and a decrease in protein content compared to the WT.”

✓ located verbatim in the source · abstract, characters 915–1095
t0

“Rice”

✓ located verbatim in the source · title, characters 100–104

Title

Genome-Wide Analysis and Functional Characterization of Pyruvate Kinase (PK) Gene Family Modulating Rice Yield and Quality

Nannan Dong; Luna Chen; Shakeel Ahmad; et al. International Journal of Molecular Sciences 2022. doi:10.3390/ijms232315357

Other claims from this paper (10)
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The grain had a wrinkled opaque appearance.

Gene
FLOURY ENDOSPERM 2t0
Outcome
wrinkled opaque appearancee0

Verbatim

e0

“the wrinkled opaque appearance and the decrease in grain width, grain thickness and grain weight imply trade-offs in grain yield.”

✓ located verbatim in the source · abstract, characters 868–997
t0

“rice germplasms with low amylose content by CRISPR/CAS9-targeted mutagenesis of the FLOURY ENDOSPERM 2 gene”

✓ located verbatim in the source · title, characters 18–125

Title

Generation of new rice germplasms with low amylose content by CRISPR/CAS9-targeted mutagenesis of the FLOURY ENDOSPERM 2 gene

Xiaohong Song; Zhihui Chen; Xi Du; et al. Frontiers in Plant Science 2023. doi:10.3389/fpls.2023.1138523

Other claims from this paper (5)
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The Ppd-A1_del303 allele gave lower harvest index and grain yield than the Ppd-A1b Ppd-B1c genotype.

Taxon
winter wheatTriticum aestivumt0
Treatment
replacement of the Ppd-A1b allele with Ppd-A1_del303e6
Gene
Ppd-A1_del303e6
Outcome
harvest index and grain yielde7
Direction
negatively affectede7
Comparator
the Ppd-A1b Ppd-B1c genotypee7

Verbatim

t0

“winter wheat (Triticum aestivum L.) agronomic traits”

✓ located verbatim in the source · title, characters 81–133
e6

“The replacement of the Ppd-A1b allele with Ppd-A1_del303 led to a decrease in the effect of the dominant Ppd-B1c allele on accelerating heading”

✓ located verbatim in the source · abstract, characters 2369–2512
e7

“negatively affected the grain weight per spike, thousand grain weight, harvest index and grain yield compared to the Ppd-A1b Ppd-B1c genotype”

✓ located verbatim in the source · abstract, characters 2517–2658

Title

Allelic variation at the PPD-A1 locus and its associations with heading time and winter wheat (Triticum aestivum L.) agronomic traits in the northern Black Sea region

V. I. Fait; O. O. Pogrebniuk; V. R. Fedorova; et al. Agricultural science and practice 2024. doi:10.15407/agrisp11.02.046

Other claims from this paper (9)
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

The reduced height allele was associated with a increase in grains per spike (GPS).

Gene
reduced height allelee0
Outcome
grains per spike (GPS)e0
Direction
increasee0

Verbatim

e0

“A major contributor to plant height was the Rht8 locus and the reduced height allele was associated with significant increase in grains per spike (GPS) and FE, and decrease in number of spikes per square meter and test weight”

✓ located verbatim in the source · abstract, characters 881–1106
t0

“wheat quality and yield related traits”

✓ located verbatim in the source · title, characters 34–72

Title

Genome wide genetic dissection of wheat quality and yield related traits and their relationship with grain shape and size traits in an elite × non-adapted bread wheat cross

Ajay Kumar; Eder E. Mantovani; Senay Simsek; et al. PLoS ONE 2019. doi:10.1371/journal.pone.0221826

Other claims from this paper (14)

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