Paper · 2026 · Physiologia Plantarum

Dual RNA ‐Seq Analyses Provide Insights Into the Interaction Mechanisms Between Melampsora larici‐populina and Populus cathayana Under Nitrogen Starvation

Haifeng Song; Tingfa Dong; Meijing Yan; et al.

11
claims
13
verbatim quotes
0
citations
5
research areas
—
Not open access

Abstract

Nitrogen (N) is an essential nutrient that strongly influences plant growth and development, and its availability can affect plant susceptibility to fungal pathogens. Poplar is a tree species widely distributed around the world. It is severely threatened by Melampsora larici-populina Kleb., a biotrophic pathogen which is the most destructive foliar pathogen of poplar trees and leads to significant biomass losses. Research on the interaction between Populus and M. larici-populina remains limited. We assessed the impact of N deficiency on foliar disease development caused by rust and to elucidate underlying physiological and molecular mechanisms in poplar, thereby providing insights into the relationship between plant nutrition and disease susceptibility. We performed an analysis of host physiological traits and plant-pathogen interaction transcriptomics in poplar trees under N deficiency and rust infection. Notably, N-deficient poplar trees showed reduced rust disease development, whereas N-sufficient poplar trees infected with rust accumulated higher levels of reactive oxygen species (ROS) and nitric oxide (NO). Both N deficiency and rust infection increased secondary metabolite accumulation in poplar leaves. Furthermore, dual RNA-seq analysis of the poplar-rust interaction identified numerous differentially expressed genes (DEGs) in poplar trees. The positive correlation in gene expression between N-deficient and rust-infected poplar suggests that similar response pathways are activated under both conditions. In contrast, an adequate N supply increased susceptibility to the pathogen. Under N-sufficient conditions, rust infection preferentially activated biotic stress-response genes while suppressing growth. N-deficient poplar conditions accumulated more antioxidant compounds, enhancing resistance by creating a less favorable environment for pathogen development. Consistently, genes in M. larici-populina associated with pathogen invasion and proliferation were down-regulated in N-deficient poplar leaves. Integrated physiological and transcriptomic analyses indicate that defenses induced by N deficiency can effectively suppress rust development and slow disease progression. These findings provide new insights into the poplar-rust interactions and offer a basis for optimizing nutrient management to improve poplar resistance.

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Claims 11

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Nitrogen-deficient poplar showed reduced rust disease development.

Taxon
poplarPopuluse0
Treatment
N-deficiente0
Interactor
ruste0pathogen
Outcome
rust disease developmente0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“N-deficient poplar trees showed reduced rust disease development”

✓ located verbatim in the source · abstract, characters 929–993 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Rust-infected nitrogen-sufficient poplar accumulated higher ROS and NO.

Taxon
poplarPopuluse0
Treatment
ruste0
Interactor
ruste0pathogen
Outcome
reactive oxygen species (ROS) and nitric oxide (NO)e0
Direction
highere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“N-sufficient poplar trees infected with rust accumulated higher levels of reactive oxygen species (ROS) and nitric oxide (NO)”

✓ located verbatim in the source · abstract, characters 1003–1128 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Nitrogen deficiency increased secondary metabolite accumulation in poplar leaves.

Taxon
poplarPopuluse0
Organ / stage
leavese0
Treatment
N deficiencye0
Outcome
secondary metabolite accumulatione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Both N deficiency and rust infection increased secondary metabolite accumulation in poplar leaves”

✓ located verbatim in the source · abstract, characters 1130–1227 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Rust infection increased secondary metabolite accumulation in poplar leaves.

Taxon
poplarPopuluse0
Organ / stage
leavese0
Treatment
rust infectione0
Interactor
ruste0pathogen
Outcome
secondary metabolite accumulatione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Both N deficiency and rust infection increased secondary metabolite accumulation in poplar leaves”

✓ located verbatim in the source · abstract, characters 1130–1227 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Dual RNA-seq identified numerous differentially expressed genes in poplar.

Taxon
poplarPopuluse0
Interactor
ruste0pathogen
Outcome
differentially expressed genes (DEGs)e0
Value
numerouse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“dual RNA-seq analysis of the poplar-rust interaction identified numerous differentially expressed genes (DEGs) in poplar trees”

✓ located verbatim in the source · abstract, characters 1242–1368 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Gene expression responses to nitrogen deficiency and rust infection were positively correlated.

Taxon
poplarPopuluse0
Treatment
N-deficient and rust-infectede0
Interactor
ruste0pathogen
Outcome
gene expressione0
Direction
positivee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The positive correlation in gene expression between N-deficient and rust-infected poplar”

✓ located verbatim in the source · abstract, characters 1370–1458 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Adequate nitrogen supply increased poplar susceptibility to the pathogen.

Taxon
Populus cathayanaPopulus cathayanat0
Treatment
an adequate N supplye0
Interactor
pathogene0pathogen
Outcome
susceptibility to the pathogene0
Direction
increasede0

Not reportedComparator

Verbatim

e0

“an adequate N supply increased susceptibility to the pathogen”

✓ located verbatim in the source · abstract, characters 1549–1610 · show in text ↑
t0

“Populus cathayana”

✓ located verbatim in the source · title, characters 111–128 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Rust infection under sufficient nitrogen preferentially activated biotic stress response genes.

Taxon
ruste0
Treatment
rust infectione0
Interactor
ruste0pathogen
Outcome
biotic stress-response genese0
Direction
activatede0

Verbatim

e0

“Under N-sufficient conditions, rust infection preferentially activated biotic stress-response genes”

✓ located verbatim in the source · abstract, characters 1612–1711 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Rust infection under sufficient nitrogen suppressed growth.

Taxon
Populus cathayanaPopulus cathayanat0
Treatment
rust infectione0
Interactor
ruste0pathogen
Outcome
growthe0
Direction
suppressinge0

Not reportedComparator

Verbatim

e0

“Under N-sufficient conditions, rust infection preferentially activated biotic stress-response genes while suppressing growth”

✓ located verbatim in the source · abstract, characters 1612–1736 · show in text ↑
t0

“Populus cathayana”

✓ located verbatim in the source · title, characters 111–128 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Nitrogen-deficient poplar accumulated more antioxidant compounds.

Taxon
poplarPopuluse0
Treatment
N-deficiente0
Outcome
antioxidant compoundse0
Direction
moree0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“N-deficient poplar conditions accumulated more antioxidant compounds”

✓ located verbatim in the source · abstract, characters 1738–1806 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Pathogen invasion and proliferation genes were down-regulated in nitrogen-deficient poplar leaves.

Taxon
poplarPopuluse0
Treatment
N-deficiente0
Interactor
M. larici-populinae0pathogen
Outcome
genes in M. larici-populina associated with pathogen invasion and proliferatione0
Direction
down-regulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“genes in M. larici-populina associated with pathogen invasion and proliferation were down-regulated in N-deficient poplar leaves”

✓ located verbatim in the source · abstract, characters 1910–2038 · show in text ↑

nitrogen · quality: phytochemicals · Populus (poplar)Results agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

This paper is about lacking the nutrient, so it counts the other way round here.

  1. negative
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.