Paper · 2025 · Industrial Crops and Products

CovQTL mapping reveals genetic mechanisms of competitive and cooperative growth between stem and leaf in Catalpa bungei

Chaozhong Shi; Nan Lu; Yuhang Zhu; et al.

8
claims
17
verbatim quotes
1
citations
3
research areas
✓
Open access · cc-by-nc-nd

Abstract

The cooperative and competitive relationships between dynamic growth (plant growth height) and static (stem- or leaf-related traits) traits affect photosynthetic efficiency. However, the underlying genetic mechanisms remain poorly understood. In this study, we applied covariation quantitative trait loci (covQTL) mapping to investigate the genetic regulation of the covariation pattern between dynamic growth in height (GH) and static leaf- or stem-related radial growth traits in Catalpa bungei . Our results revealed that leaf area, length, width, perimeter, and chlorophyll content positively influence GH, reflecting cooperative genetic interactions, while the leaf length/width ratio, diameter at breast height, and petiole length act as limiting factors for GH, indicating competitive genetic regulation. Furthermore, we identified 85 cooperation QTLs (CoopQTLs) and 27 competition QTL (CompQTLs), revealing key genes with distinct roles. NAC083 , a cooperation gene, regulates both plant height (GH) and leaf development by promoting cell expansion and division, through its involvement in cell wall biosynthesis and cell cycle regulation, as well as interactions with growth-related pathways like auxin and cytokinin signaling. In contrast, PIN8 , a competition gene, promotes GH by regulating auxin transport, directing auxin flow to promote stem elongation. However, it inhibits leaf vein elongation, especially the midrib, by disrupting auxin distribution in the leaf, leading to reduced leaf length. PIN8 and NAC083 were identified as hub genes within distinct genetic networks through gene expression analysis, further validating the modular regulation of competition and cooperation phenotypes by separate regulatory strategies. We highlight genetic mechanisms underlying stem-leaf growth coordination and trade-offs, providing valuable insights into the cooperative and competitive patterns in primary and leaf/stem-related growth for breeding forest tree varieties with optimal architecture, wood yield, and quality.

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Claims 8

Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Leaf area, length, width, perimeter and chlorophyll content positively influenced Catalpa growth height.

Taxon
Catalpa bungeiCatalpa bungeit0
Organ / stage
leafe0
Outcome
GHe0
Direction
positively influencee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Catalpa bungei
Catalpa bungei · TaxonHorsePunchKid · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“leaf area, length, width, perimeter, and chlorophyll content positively influence GH”

✓ located verbatim in the source · abstract, characters 525–609 · show in text ↑
t0

“Catalpa bungei”

✓ located verbatim in the source · title, characters 105–119 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Leaf length/width ratio, diameter at breast height and petiole length limited Catalpa growth height.

Taxon
Catalpa bungeiCatalpa bungeit0
Organ / stage
leafe0
Outcome
GHe0
Direction
limiting factorse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Catalpa bungei
Catalpa bungei · TaxonHorsePunchKid · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the leaf length/width ratio, diameter at breast height, and petiole length act as limiting factors for GH”

✓ located verbatim in the source · abstract, characters 662–767 · show in text ↑
t0

“Catalpa bungei”

✓ located verbatim in the source · title, characters 105–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Mapping identified 85 cooperation QTLs.

Taxon
Catalpa bungeiCatalpa bungeit0
Gene
cooperation QTLse0
Outcome
cooperation QTLse0
Value
85e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Catalpa bungei
Catalpa bungei · TaxonHorsePunchKid · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“we identified 85 cooperation QTLs (CoopQTLs) and 27 competition QTL (CompQTLs)”

✓ located verbatim in the source · abstract, characters 825–903 · show in text ↑
t0

“Catalpa bungei”

✓ located verbatim in the source · title, characters 105–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Mapping identified 27 competition QTLs.

Taxon
Catalpa bungeiCatalpa bungeit0
Gene
competition QTLe0
Outcome
competition QTLe0
Value
27e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Catalpa bungei
Catalpa bungei · TaxonHorsePunchKid · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“we identified 85 cooperation QTLs (CoopQTLs) and 27 competition QTL (CompQTLs)”

✓ located verbatim in the source · abstract, characters 825–903 · show in text ↑
t0

“Catalpa bungei”

✓ located verbatim in the source · title, characters 105–119 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

NAC083 promoted height and leaf development through cell expansion and division.

Taxon
Catalpa bungeiCatalpa bungeit0
Gene
NAC083e0
Outcome
plant height (GH) and leaf developmente0
Direction
promotinge0
Qualifier
cell expansion and divisione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Catalpa bungei
Catalpa bungei · TaxonHorsePunchKid · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“NAC083 , a cooperation gene, regulates both plant height (GH) and leaf development by promoting cell expansion and division, through its involvement in cell wall biosynthesis and cell cycle regulation”

✓ located verbatim in the source · abstract, characters 946–1146 · show in text ↑
t0

“Catalpa bungei”

✓ located verbatim in the source · title, characters 105–119 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

PIN8 promoted height by regulating auxin transport and stem elongation.

Taxon
Catalpa bungeiCatalpa bungeit0
Gene
PIN8e0
Compound
auxine0
Outcome
GHe0
Direction
promotese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Catalpa bungei
Catalpa bungei · TaxonHorsePunchKid · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“PIN8 , a competition gene, promotes GH by regulating auxin transport, directing auxin flow to promote stem elongation.”

✓ located verbatim in the source · abstract, characters 1250–1368 · show in text ↑
t0

“Catalpa bungei”

✓ located verbatim in the source · title, characters 105–119 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

PIN8 inhibited leaf vein elongation and reduced leaf length through disturbed auxin distribution.

Taxon
Catalpa bungeiCatalpa bungeit0
Gene
PIN8e1
Compound
auxine0
Outcome
leaf vein elongatione0
Direction
inhibitse0
Qualifier
leading to reduced leaf lengthe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Catalpa bungei
Catalpa bungei · TaxonHorsePunchKid · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“it inhibits leaf vein elongation, especially the midrib, by disrupting auxin distribution in the leaf, leading to reduced leaf length.”

✓ located verbatim in the source · abstract, characters 1378–1512 · show in text ↑
e1

“PIN8 , a competition gene, promotes GH”

✓ located verbatim in the source · abstract, characters 1250–1288 · show in text ↑
t0

“Catalpa bungei”

✓ located verbatim in the source · title, characters 105–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Expression analysis identified PIN8 and NAC083 as hub genes in distinct genetic networks.

Taxon
Catalpa bungeiCatalpa bungeit0
Gene
PIN8 and NAC083e0
Outcome
hub genes within distinct genetic networkse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Catalpa bungei
Catalpa bungei · TaxonHorsePunchKid · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“PIN8 and NAC083 were identified as hub genes within distinct genetic networks through gene expression analysis”

✓ located verbatim in the source · abstract, characters 1513–1623 · show in text ↑
t0

“Catalpa bungei”

✓ located verbatim in the source · title, characters 105–119 · show in text ↑