Paper · 2024 · Scientia Horticulturae

Genomic and functional insights into Bacillus velezensis KB21— A promising rhizobacterium for enhancing plant growth and stress tolerance in cucumber

Beom Ryong Kang; Mi dam Kim; Joon Seong Park; et al.

12
claims
27
verbatim quotes
4
citations
3
research areas
✓
Open access · cc-by-nc-nd

Abstract

• Bacillus velezensis KB21 promotes cucumber growth under optimal inoculation conditions. • B. velezensis KB21 enhances salt tolerance by modulating ion balance and antioxidant defenses. • B. velezensis KB21 upregulates stress-responsive and phytohormone biosynthesis genes. • Whole-genome analysis reveals genes linked to plant growth and stress adaptation. • B. velezensis KB21 shows promise as a biofertilizer for sustainable agricultural practices. This study investigates the genomic and functional traits of Bacillus velezensis KB21, a plant growth–promoting rhizobacterium, and its effects on cucumber ( Cucumis sativus ) growth and salt stress tolerance. Whole–genome sequencing revealed a 4.12 Mb circular chromosome with 27 rRNA genes, 86 tRNA genes, and 4,015 coding sequences, including those involved in auxin (IAA), gibberellin (GA), and volatile organic compound biosynthesis. Inoculation at optimal concentration (log 5 and log 3 CFU/mL) significantly enhanced cucumber growth, increasing fresh and dry biomass, leaf area, and root colonization. Growth promotion was linked to the enhanced expression of CsSAUR50 and CsGA20ox , which regulate auxin and GA biosynthesis during seed germination. Under salt stress conditions, KB21–treated plants showed improved growth, a favorable Na + /K + ratio, and increased antioxidant enzyme activities (SOD, POD, and CAT). The treatment upregulated stress–responsive genes, including HKT, NHX , and AQP , and ABA–related genes ( CsNCED1 and CsCYP707A1 ), demonstrating its role in ion homeostasis and ABA–mediated stress adaptation. These findings highlight the potential of B. velezensis KB21 as a sustainable biofertilizer for enhancing plant growth and resilience under abiotic stress conditions

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc-nd. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculation with B. velezensis KB21 at optimal concentration increased fresh and dry biomass and leaf area of cucumber.

Taxon
cucumberCucumis sativust0
Treatment
Inoculation at optimal concentration (log 5 and log 3 CFU/mL)e1
Interactor
Bacillus velezensis KB21Bacillus velezensist1symbiont
Outcome
fresh and dry biomass, leaf areae1
Direction
increasinge1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗
Bacillus velezensis
Bacillus velezensis · InteractorMarinka Pavlova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
t1

“Bacillus velezensis KB21”

✓ located verbatim in the source · title, characters 37–61 · show in text ↑
e1

“Inoculation at optimal concentration (log 5 and log 3 CFU/mL) significantly enhanced cucumber growth, increasing fresh and dry biomass, leaf area, and root colonization”

✓ located verbatim in the source · abstract, characters 892–1060 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculation with B. velezensis KB21 at optimal concentration increased root colonization of cucumber.

Taxon
cucumberCucumis sativust0
Treatment
Inoculation at optimal concentration (log 5 and log 3 CFU/mL)e1
Interactor
Bacillus velezensis KB21Bacillus velezensist1symbiont
Outcome
root colonizatione1
Direction
increasinge1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗
Bacillus velezensis
Bacillus velezensis · InteractorMarinka Pavlova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
t1

“Bacillus velezensis KB21”

✓ located verbatim in the source · title, characters 37–61 · show in text ↑
e1

“Inoculation at optimal concentration (log 5 and log 3 CFU/mL) significantly enhanced cucumber growth, increasing fresh and dry biomass, leaf area, and root colonization”

✓ located verbatim in the source · abstract, characters 892–1060 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The B. velezensis KB21 genome has a 4.12 Mb circular chromosome.

Taxon
cucumberCucumis sativust0
Outcome
circular chromosomee2
Value
4.12 Mbe2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
e2

“Whole–genome sequencing revealed a 4.12 Mb circular chromosome with 27 rRNA genes, 86 tRNA genes, and 4,015 coding sequences”

✓ located verbatim in the source · abstract, characters 663–787 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The B. velezensis KB21 genome contains 27 rRNA genes.

Taxon
cucumberCucumis sativust0
Outcome
rRNA genese2
Value
27e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
e2

“Whole–genome sequencing revealed a 4.12 Mb circular chromosome with 27 rRNA genes, 86 tRNA genes, and 4,015 coding sequences”

✓ located verbatim in the source · abstract, characters 663–787 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The B. velezensis KB21 genome contains 86 tRNA genes.

Taxon
cucumberCucumis sativust0
Outcome
tRNA genese2
Value
86e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
e2

“Whole–genome sequencing revealed a 4.12 Mb circular chromosome with 27 rRNA genes, 86 tRNA genes, and 4,015 coding sequences”

✓ located verbatim in the source · abstract, characters 663–787 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The B. velezensis KB21 genome contains 4,015 coding sequences.

Taxon
cucumberCucumis sativust0
Outcome
coding sequencese2
Value
4,015e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
e2

“Whole–genome sequencing revealed a 4.12 Mb circular chromosome with 27 rRNA genes, 86 tRNA genes, and 4,015 coding sequences”

✓ located verbatim in the source · abstract, characters 663–787 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Under salt stress, KB21 treatment improved cucumber growth.

Taxon
cucumberCucumis sativust0
Treatment
salt stress conditionse4
Interactor
Bacillus velezensis KB21Bacillus velezensist1symbiont
Outcome
growthe4
Direction
improvede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗
Bacillus velezensis
Bacillus velezensis · InteractorMarinka Pavlova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
t1

“Bacillus velezensis KB21”

✓ located verbatim in the source · title, characters 37–61 · show in text ↑
e4

“Under salt stress conditions, KB21–treated plants showed improved growth, a favorable Na + /K + ratio, and increased antioxidant enzyme activities (SOD, POD, and CAT)”

✓ located verbatim in the source · abstract, characters 1210–1376 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Under salt stress, KB21-treated cucumber plants had a favorable Na+/K+ ratio.

Taxon
cucumberCucumis sativust0
Treatment
salt stress conditionse4
Outcome
Na + /K + ratioe4
Direction
favorablee4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
e4

“Under salt stress conditions, KB21–treated plants showed improved growth, a favorable Na + /K + ratio, and increased antioxidant enzyme activities (SOD, POD, and CAT)”

✓ located verbatim in the source · abstract, characters 1210–1376 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Under salt stress, KB21-treated cucumber plants showed increased antioxidant enzyme activities (SOD, POD and CAT).

Taxon
cucumberCucumis sativust0
Treatment
salt stress conditionse4
Outcome
antioxidant enzyme activities (SOD, POD, and CAT)e4
Direction
increasede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
e4

“Under salt stress conditions, KB21–treated plants showed improved growth, a favorable Na + /K + ratio, and increased antioxidant enzyme activities (SOD, POD, and CAT)”

✓ located verbatim in the source · abstract, characters 1210–1376 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

KB21 treatment upregulated stress-responsive genes HKT, NHX and AQP in cucumber.

Taxon
cucumberCucumis sativust0
Treatment
The treatmente5
Gene
HKT, NHX , and AQPe5
Outcome
stress–responsive genese5
Direction
upregulatede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
e5

“The treatment upregulated stress–responsive genes, including HKT, NHX , and AQP , and ABA–related genes ( CsNCED1 and CsCYP707A1 )”

✓ located verbatim in the source · abstract, characters 1378–1508 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

KB21 treatment upregulated ABA-related genes CsNCED1 and CsCYP707A1 in cucumber.

Taxon
cucumberCucumis sativust0
Treatment
The treatmente5
Gene
CsNCED1 and CsCYP707A1e5
Outcome
ABA–related genese5
Direction
upregulatede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
e5

“The treatment upregulated stress–responsive genes, including HKT, NHX , and AQP , and ABA–related genes ( CsNCED1 and CsCYP707A1 )”

✓ located verbatim in the source · abstract, characters 1378–1508 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Growth promotion in cucumber was linked to enhanced expression of CsSAUR50 and CsGA20ox.

Taxon
cucumberCucumis sativust0
Gene
CsSAUR50 and CsGA20oxe3
Outcome
expressione3
Direction
enhancede3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“stress tolerance in cucumber”

✓ located verbatim in the source · title, characters 121–149 · show in text ↑
e3

“Growth promotion was linked to the enhanced expression of CsSAUR50 and CsGA20ox”

✓ located verbatim in the source · abstract, characters 1062–1141 · show in text ↑

salinity · soil: biology · Cucumis sativus (cucumber)Positive and negative results

4 papers: 3 positive, 1 negative or no effect

2 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.