Abstract
By using PacBio HiFi technology, we produced over 700 Gb of long-read sequencing (LRS) raw data; and by using Illumina paired-end whole-genome shotgun (WGS) sequencing technology, we generated more than 70 Gb of short-read sequencing (SRS) data. With LRS data, we assembled one genome and then generate a set of annotation data for an early-matured Geng/japonica glutinous rice mega variety genome, Longgeng 57 (LG57), which carries multiple elite traits including good grain quality and wide adaptability. Together with the SRS data from three parents of LG57, pedigree genome variations were called for three representative types of genes. These data sets can be used for deep variation mining, aid in the discovery of new insights into genome structure, function, and evolution, and help to provide essential support to biological research in general.
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Claims 4
Claim · model-written summary
Long-read sequencing of Longgeng 57 produced over 700 Gb of raw data.
Verbatim
e0“an early-matured Geng/japonica glutinous rice mega variety genome, Longgeng 57 (LG57)”
e1“we produced over 700 Gb of long-read sequencing (LRS) raw data”
Claim · model-written summary
Short-read sequencing of the parents produced more than 70 Gb of data.
Verbatim
e0“an early-matured Geng/japonica glutinous rice mega variety genome, Longgeng 57 (LG57)”
e1“we generated more than 70 Gb of short-read sequencing (SRS) data”
Claim · model-written summary
One genome was assembled from the long-read data, with a set of annotation data.
Verbatim
e0“an early-matured Geng/japonica glutinous rice mega variety genome, Longgeng 57 (LG57)”
e1“we assembled one genome and then generate a set of annotation data”
Claim · model-written summary
Pedigree genome variations were called for three representative types of genes.
Verbatim
e0“an early-matured Geng/japonica glutinous rice mega variety genome, Longgeng 57 (LG57)”
e1“pedigree genome variations were called for three representative types of genes”