Paper · 2023 · International Journal of Molecular Sciences

Genome-Wide Analysis of MBF1 Family Genes in Five Solanaceous Plants and Functional Analysis of SlER24 in Salt Stress

Dongnan Xia; Lulu Guan; Yue Yin; et al.

12
claims
20
verbatim quotes
7
citations
2
research areas
✓
Open access · cc-by

Abstract

Multiprotein bridging factor 1 (MBF1) is an ancient family of transcription coactivators that play a crucial role in the response of plants to abiotic stress. In this study, we analyzed the genomic data of five Solanaceae plants and identified a total of 21 MBF1 genes. The expansion of MBF1a and MBF1b subfamilies was attributed to whole-genome duplication (WGD), and the expansion of the MBF1c subfamily occurred through transposed duplication (TRD). Collinearity analysis within Solanaceae species revealed collinearity between members of the MBF1a and MBF1b subfamilies, whereas the MBF1c subfamily showed relative independence. The gene expression of SlER24 was induced by sodium chloride (NaCl), polyethylene glycol (PEG), ABA (abscisic acid), and ethrel treatments, with the highest expression observed under NaCl treatment. The overexpression of SlER24 significantly enhanced the salt tolerance of tomato, and the functional deficiency of SlER24 decreased the tolerance of tomato to salt stress. SlER24 enhanced antioxidant enzyme activity to reduce the accumulation of reactive oxygen species (ROS) and alleviated plasma membrane damage under salt stress. SlER24 upregulated the expression levels of salt stress-related genes to enhance salt tolerance in tomato. In conclusion, this study provides basic information for the study of the MBF1 family of Solanaceae under abiotic stress, as well as a reference for the study of other plants.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 12

Observationobservedoriginal resultmeasured

Claim · model-written summary

Five Solanaceae plants were found to carry a total of 21 MBF1 genes.

Taxon
five Solanaceae plantse0
Gene
MBF1 genese0
Outcome
MBF1 genese0
Value
21e0

Verbatim

e0

“we analyzed the genomic data of five Solanaceae plants and identified a total of 21 MBF1 genes”

✓ located verbatim in the source · abstract, characters 174–268 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Expansion of the MBF1a and MBF1b subfamilies is attributed to whole-genome duplication in Solanaceae.

Taxon
five Solanaceae plantse0
Outcome
expansion of MBF1a and MBF1b subfamiliese1
Qualifier
whole-genome duplication (WGD)e1

Verbatim

e0

“we analyzed the genomic data of five Solanaceae plants and identified a total of 21 MBF1 genes”

✓ located verbatim in the source · abstract, characters 174–268 · show in text ↑
e1

“The expansion of MBF1a and MBF1b subfamilies was attributed to whole-genome duplication (WGD), and the expansion of the MBF1c subfamily occurred through transposed duplication (TRD)”

✓ located verbatim in the source · abstract, characters 270–451 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Expansion of the MBF1c subfamily in Solanaceae occurred through transposed duplication.

Taxon
five Solanaceae plantse0
Outcome
expansion of the MBF1c subfamilye1
Qualifier
through transposed duplication (TRD)e1

Verbatim

e0

“we analyzed the genomic data of five Solanaceae plants and identified a total of 21 MBF1 genes”

✓ located verbatim in the source · abstract, characters 174–268 · show in text ↑
e1

“The expansion of MBF1a and MBF1b subfamilies was attributed to whole-genome duplication (WGD), and the expansion of the MBF1c subfamily occurred through transposed duplication (TRD)”

✓ located verbatim in the source · abstract, characters 270–451 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Collinearity within Solanaceae species was found between MBF1a and MBF1b members, while MBF1c showed relative independence.

Taxon
Solanaceae speciesSolanaceaee2
Outcome
collinearity between members of the MBF1a and MBF1b subfamiliese2
Qualifier
whereas the MBF1c subfamily showed relative independencee2

Verbatim

e2

“Collinearity analysis within Solanaceae species revealed collinearity between members of the MBF1a and MBF1b subfamilies, whereas the MBF1c subfamily showed relative independence”

✓ located verbatim in the source · abstract, characters 453–631 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

SlER24 expression in tomato was induced by NaCl, PEG, ABA and ethrel treatments.

Treatment
sodium chloride (NaCl), polyethylene glycol (PEG), ABA (abscisic acid), and ethrele2
Gene
SlER24e2
Outcome
gene expression of SlER24e2
Direction
inducede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“The gene expression of SlER24 was induced by sodium chloride (NaCl), polyethylene glycol (PEG), ABA (abscisic acid), and ethrel treatments, with the highest expression observed under NaCl treatment”

✓ located verbatim in the source · abstract, characters 633–830 · show in text ↑
e3

“The overexpression of SlER24 significantly enhanced the salt tolerance of tomato”

✓ located verbatim in the source · abstract, characters 832–912 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

SlER24 expression in tomato was highest under NaCl treatment.

Treatment
NaCl treatmente2
Gene
SlER24e2
Outcome
gene expression of SlER24e2
Direction
higheste2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“The gene expression of SlER24 was induced by sodium chloride (NaCl), polyethylene glycol (PEG), ABA (abscisic acid), and ethrel treatments, with the highest expression observed under NaCl treatment”

✓ located verbatim in the source · abstract, characters 633–830 · show in text ↑
e3

“The overexpression of SlER24 significantly enhanced the salt tolerance of tomato”

✓ located verbatim in the source · abstract, characters 832–912 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Overexpression of SlER24 significantly enhanced salt tolerance of tomato.

Treatment
overexpression of SlER24e3
Gene
SlER24e3
Outcome
salt tolerancee3
Direction
significantly enhancede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“The overexpression of SlER24 significantly enhanced the salt tolerance of tomato, and the functional deficiency of SlER24 decreased the tolerance of tomato to salt stress”

✓ located verbatim in the source · abstract, characters 832–1002 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Functional deficiency of SlER24 decreased salt tolerance of tomato.

Treatment
functional deficiency of SlER24e3
Gene
SlER24e3
Outcome
tolerance of tomato to salt stresse3
Direction
decreasede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“The overexpression of SlER24 significantly enhanced the salt tolerance of tomato, and the functional deficiency of SlER24 decreased the tolerance of tomato to salt stress”

✓ located verbatim in the source · abstract, characters 832–1002 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SlER24 enhanced antioxidant enzyme activity in tomato under salt stress.

Treatment
under salt stresse4
Gene
SlER24e4
Outcome
antioxidant enzyme activitye4
Direction
enhancede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“The overexpression of SlER24 significantly enhanced the salt tolerance of tomato”

✓ located verbatim in the source · abstract, characters 832–912 · show in text ↑
e4

“SlER24 enhanced antioxidant enzyme activity to reduce the accumulation of reactive oxygen species (ROS) and alleviated plasma membrane damage under salt stress”

✓ located verbatim in the source · abstract, characters 1004–1163 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SlER24 reduced reactive oxygen species accumulation in tomato under salt stress.

Treatment
under salt stresse4
Gene
SlER24e4
Outcome
accumulation of reactive oxygen species (ROS)e4
Direction
reducee4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“The overexpression of SlER24 significantly enhanced the salt tolerance of tomato”

✓ located verbatim in the source · abstract, characters 832–912 · show in text ↑
e4

“SlER24 enhanced antioxidant enzyme activity to reduce the accumulation of reactive oxygen species (ROS) and alleviated plasma membrane damage under salt stress”

✓ located verbatim in the source · abstract, characters 1004–1163 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SlER24 alleviated plasma membrane damage in tomato under salt stress.

Treatment
under salt stresse4
Gene
SlER24e4
Outcome
plasma membrane damagee4
Direction
alleviatede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“The overexpression of SlER24 significantly enhanced the salt tolerance of tomato”

✓ located verbatim in the source · abstract, characters 832–912 · show in text ↑
e4

“SlER24 enhanced antioxidant enzyme activity to reduce the accumulation of reactive oxygen species (ROS) and alleviated plasma membrane damage under salt stress”

✓ located verbatim in the source · abstract, characters 1004–1163 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SlER24 upregulated expression of salt stress-related genes in tomato.

Treatment
SlER24e5
Gene
SlER24e5
Outcome
expression levels of salt stress-related genese5
Direction
upregulatede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“The overexpression of SlER24 significantly enhanced the salt tolerance of tomato”

✓ located verbatim in the source · abstract, characters 832–912 · show in text ↑
e5

“SlER24 upregulated the expression levels of salt stress-related genes to enhance salt tolerance in tomato”

✓ located verbatim in the source · abstract, characters 1165–1270 · show in text ↑

salinity · soil: biology · Solanum lycopersicum (tomato)Positive and negative results

10 papers: 5 positive, 5 negative or no effect

4 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. negative
  3. negative

6 papers more in this group

See all 10 papers →

salinity · physiology: oxidative · Solanum lycopersicum (tomato)Positive and negative results

63 papers: 5 positive, 58 negative or no effect

4 papers in the same direction as this paper · 58 in the opposite direction

  1. negative
  2. negative
  3. negative

59 papers more in this group

See all 63 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.