Paper · 2023 · Frontiers in Microbiology

Silicate solubilizing and plant growth promoting bacteria interact with biogenic silica to impart heat stress tolerance in rice by modulating physiology and gene expression

Chandrakala Chaganti; Amol Sarjerao Phule; Latha P. Chandran; et al.

6
claims
26
verbatim quotes
16
citations
2
research areas
✓
Open access · cc-by

Abstract

Heat stress caused due to increasing warming climate has become a severe threat to global food production including rice. Silicon plays a major role in improving growth and productivity of rice by aiding in alleviating heat stress in rice. Soil silicon is only sparingly available to the crops can be made available by silicate solubilizing and plant-growth-promoting bacteria that possess the capacity to solubilize insoluble silicates can increase the availability of soluble silicates in the soil. In addition, plant growth promoting bacteria are known to enhance the tolerance to abiotic stresses of plants, by affecting the biochemical and physiological characteristics of plants. The present study is intended to understand the role of beneficial bacteria viz. Rhizobium sp. IIRR N1 a silicate solublizer and Gluconacetobacter diazotrophicus , a plant growth promoting bacteria and their interaction with insoluble silicate sources on morpho-physiological and molecular attributes of rice ( Oryza sativa L.) seedlings after exposure to heat stress in a controlled hydroponic system. Joint inoculation of silicates and both the bacteria increased silicon content in rice tissue, root and shoot biomass, significantly increased the antioxidant enzyme activities (viz. superoxidase dismutase, catalase and ascorbate peroxidase) compared to other treatments with sole application of either silicon or bacteria. The physiological traits (viz. chlorophyll content, relative water content) were also found to be significantly enhanced in presence of silicates and both the bacteria after exposure to heat stress conditions. Expression profiling of shoot and root tissues of rice seedlings revealed that seedlings grown in the presence of silicates and both the bacteria exhibited higher expression of heat shock proteins (HSPs viz., OsHsp90 , OsHsp100 and 60 kDa chaperonin ), hormone-related genes ( OsIAA6 ) and silicon transporters ( OsLsi1 and OsLsi2 ) as compared to seedlings treated with either silicates or with the bacteria alone. The results thus reveal the interactive effect of combined application of silicates along with bacteria Rhizobium sp. IIRR N1, G. diazotrophicus inoculation not only led to augmented silicon uptake by rice seedlings but also influenced the plant biomass and elicited higher expression of HSPs, hormone-related and silicon transporter genes leading to improved tolerance of seedling to heat stress.

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Claims 6

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Joint inoculation of silicates and both bacteria increased silicon content in rice tissue

Treatment
Joint inoculation of silicates and both the bacteriae1
Interactor
Rhizobium sp. IIRR N1e2symbiont
Second interactor
Gluconacetobacter diazotrophicusGluconacetobacter diazotrophicuse4symbiont
Outcome
silicon content in rice tissuee1
Direction
increasede1
Comparator
sole application of either silicon or bacteriae3
Setting
controlled hydroponic systeme0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“morpho-physiological and molecular attributes of rice ( Oryza sativa L.) seedlings after exposure to heat stress in a controlled hydroponic system”

✓ located verbatim in the source · abstract, characters 941–1087 · show in text ↑
e1

“Joint inoculation of silicates and both the bacteria increased silicon content in rice tissue, root and shoot biomass”

✓ located verbatim in the source · abstract, characters 1089–1206 · show in text ↑
e3

“compared to other treatments with sole application of either silicon or bacteria”

✓ located verbatim in the source · abstract, characters 1331–1411 · show in text ↑
e2

“Rhizobium sp. IIRR N1 a silicate solublizer”

✓ located verbatim in the source · abstract, characters 767–810 · show in text ↑
e4

“Gluconacetobacter diazotrophicus , a plant growth promoting bacteria”

✓ located verbatim in the source · abstract, characters 815–883 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Joint inoculation of silicates and both bacteria increased root and shoot biomass of rice seedlings

Treatment
Joint inoculation of silicates and both the bacteriae1
Interactor
Rhizobium sp. IIRR N1e2symbiont
Second interactor
Gluconacetobacter diazotrophicusGluconacetobacter diazotrophicuse4symbiont
Outcome
root and shoot biomasse1
Direction
increasede1
Comparator
sole application of either silicon or bacteriae3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“morpho-physiological and molecular attributes of rice ( Oryza sativa L.) seedlings after exposure to heat stress in a controlled hydroponic system”

✓ located verbatim in the source · abstract, characters 941–1087 · show in text ↑
e1

“Joint inoculation of silicates and both the bacteria increased silicon content in rice tissue, root and shoot biomass”

✓ located verbatim in the source · abstract, characters 1089–1206 · show in text ↑
e3

“compared to other treatments with sole application of either silicon or bacteria”

✓ located verbatim in the source · abstract, characters 1331–1411 · show in text ↑
e2

“Rhizobium sp. IIRR N1 a silicate solublizer”

✓ located verbatim in the source · abstract, characters 767–810 · show in text ↑
e4

“Gluconacetobacter diazotrophicus , a plant growth promoting bacteria”

✓ located verbatim in the source · abstract, characters 815–883 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Joint inoculation significantly increased the antioxidant enzyme activities superoxide dismutase, catalase and ascorbate peroxidase

Treatment
Joint inoculation of silicates and both the bacteriae1
Interactor
Rhizobium sp. IIRR N1e4symbiont
Second interactor
Gluconacetobacter diazotrophicusGluconacetobacter diazotrophicuse5symbiont
Outcome
antioxidant enzyme activitiese2
Direction
increasede2
Qualifier
superoxidase dismutase, catalase and ascorbate peroxidasee2
Comparator
sole application of either silicon or bacteriae3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“morpho-physiological and molecular attributes of rice ( Oryza sativa L.) seedlings after exposure to heat stress in a controlled hydroponic system”

✓ located verbatim in the source · abstract, characters 941–1087 · show in text ↑
e1

“Joint inoculation of silicates and both the bacteria increased silicon content in rice tissue, root and shoot biomass”

✓ located verbatim in the source · abstract, characters 1089–1206 · show in text ↑
e2

“significantly increased the antioxidant enzyme activities (viz. superoxidase dismutase, catalase and ascorbate peroxidase)”

✓ located verbatim in the source · abstract, characters 1208–1330 · show in text ↑
e3

“compared to other treatments with sole application of either silicon or bacteria”

✓ located verbatim in the source · abstract, characters 1331–1411 · show in text ↑
e4

“Rhizobium sp. IIRR N1 a silicate solublizer”

✓ located verbatim in the source · abstract, characters 767–810 · show in text ↑
e5

“Gluconacetobacter diazotrophicus , a plant growth promoting bacteria”

✓ located verbatim in the source · abstract, characters 815–883 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Silicates with both bacteria enhanced chlorophyll content and relative water content of rice under heat stress

Treatment
in presence of silicates and both the bacteriae4
Outcome
chlorophyll content, relative water contente4
Direction
enhancede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“morpho-physiological and molecular attributes of rice ( Oryza sativa L.) seedlings after exposure to heat stress in a controlled hydroponic system”

✓ located verbatim in the source · abstract, characters 941–1087 · show in text ↑
e4

“The physiological traits (viz. chlorophyll content, relative water content) were also found to be significantly enhanced in presence of silicates and both the bacteria after exposure to heat stress conditions”

✓ located verbatim in the source · abstract, characters 1413–1621 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seedlings grown with silicates and both bacteria showed higher expression of heat shock protein genes

Treatment
in the presence of silicates and both the bacteriae5
Gene
OsHsp90e5
Outcome
expression of heat shock proteinse5
Direction
highere5
Qualifier
OsHsp100 and 60 kDa chaperonine6
Comparator
seedlings treated with either silicates or with the bacteria alonee7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“morpho-physiological and molecular attributes of rice ( Oryza sativa L.) seedlings after exposure to heat stress in a controlled hydroponic system”

✓ located verbatim in the source · abstract, characters 941–1087 · show in text ↑
e5

“seedlings grown in the presence of silicates and both the bacteria exhibited higher expression of heat shock proteins (HSPs viz., OsHsp90”

✓ located verbatim in the source · abstract, characters 1702–1839 · show in text ↑
e6

“OsHsp100 and 60 kDa chaperonin”

✓ located verbatim in the source · abstract, characters 1842–1872 · show in text ↑
e7

“as compared to seedlings treated with either silicates or with the bacteria alone”

✓ located verbatim in the source · abstract, characters 1956–2037 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seedlings grown with silicates and both bacteria showed higher expression of hormone-related and silicon transporter genes

Treatment
in the presence of silicates and both the bacteriae5
Gene
OsIAA6e7
Outcome
hormone-related genese7
Direction
highere5
Comparator
seedlings treated with either silicates or with the bacteria alonee6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“morpho-physiological and molecular attributes of rice ( Oryza sativa L.) seedlings after exposure to heat stress in a controlled hydroponic system”

✓ located verbatim in the source · abstract, characters 941–1087 · show in text ↑
e5

“seedlings grown in the presence of silicates and both the bacteria exhibited higher expression of heat shock proteins (HSPs viz., OsHsp90”

✓ located verbatim in the source · abstract, characters 1702–1839 · show in text ↑
e7

“hormone-related genes ( OsIAA6 ) and silicon transporters ( OsLsi1 and OsLsi2 ) as compared to seedlings treated with either silicates or with the bacteria alone”

✓ located verbatim in the source · abstract, characters 1876–2037 · show in text ↑
e6

“as compared to seedlings treated with either silicates or with the bacteria alone”

✓ located verbatim in the source · abstract, characters 1956–2037 · show in text ↑

silicate mineral · nutrient: content · Oryza sativa (rice)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

inoculation · soil: biology · Oryza sativa (rice)Positive and negative results

36 papers: 34 positive, 2 negative or no effect

33 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

32 papers more in this group

See all 36 papers →

inoculation · molecular: expression · Oryza sativa (rice)Positive and negative results

56 papers: 51 positive, 5 negative or no effect

50 papers in the same direction as this paper · 4 in the opposite direction · 1 reporting no difference from an alternative

  1. no effect
  2. no effect
  3. negative

52 papers more in this group

See all 56 papers →

inoculation · nutrient: content · Oryza sativa (rice)Positive and negative results

167 papers: 160 positive, 7 negative or no effect

159 papers in the same direction as this paper · 7 in the opposite direction

  1. no effect
  2. negative
  3. no effect

163 papers more in this group

See all 167 papers →

inoculation · growth · Oryza sativa (rice)Positive and negative results

399 papers: 362 positive, 37 negative or no effect

361 papers in the same direction as this paper · 34 in the opposite direction · 3 reporting no difference from an alternative

  1. no effect
  2. negative
  3. no effect

395 papers more in this group

See all 399 papers →

inoculation · physiology: water · Oryza sativa (rice)Results agree

14 papers: 14 positive, 0 negative or no effect

13 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

10 papers more in this group

See all 14 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.