Paper · 2023 · Frontiers in Plant Science

A method for analyzing programmed cell death in xylem development by flow cytometry

Ying-Li Liu; Ying-Hua Guo; Xue-Qin Song; et al.

3
claims
6
verbatim quotes
8
citations
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research areas
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Open access · cc-by

Abstract

Programmed cell death (PCD) is a genetically regulated developmental process leading to the death of specific types of plant cells, which plays important roles in plant development and growth such as wood formation. However, an efficient method needs to be established to study PCD in woody plants. Flow cytometry is widely utilized to evaluate apoptosis in mammalian cells, while it is rarely used to detect PCD in plants, especially in woody plants. Here, we reported that the xylem cell protoplasts from poplar stem were stained with a combination of fluorescein annexin V-FITC and propidium iodide (PI) and then sorted by flow cytometry. As expected, living cells (annexin V-FITC negative/PI negative), early PCD cells (annexin V-FITC positive/PI negative), and late PCD cells (annexin V-FITC positive/PI positive) could be finely distinguished through this method and then subjected for quantitative analysis. The expression of cell-type- and developmental stages-specific marker genes was consistent with the cell morphological observation. Therefore, the newly developed fluorescence-activated cell sorting (FACS) method can be used to study PCD in woody plants, which will be beneficial for studying the molecular mechanisms of wood formation.

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Claims 3

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Flow cytometry distinguished living, early PCD and late PCD cells.

Taxon
poplarPopuluse1
Outcome
living cellse0
Comparator
early PCD cellse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“living cells (annexin V-FITC negative/PI negative), early PCD cells (annexin V-FITC positive/PI negative), and late PCD cells (annexin V-FITC positive/PI positive) could be finely distinguished through this method and then subjected for quantitative analysis”

✓ located verbatim in the source · abstract, characters 655–913 · show in text ↑
e1

“xylem cell protoplasts from poplar stem”

✓ located verbatim in the source · abstract, characters 479–518 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Marker gene expression agreed with cell morphology.

Taxon
poplarPopuluse1
Outcome
expression of cell-type- and developmental stages-specific marker genese0
Comparator
cell morphological observatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The expression of cell-type- and developmental stages-specific marker genes was consistent with the cell morphological observation”

✓ located verbatim in the source · abstract, characters 915–1045 · show in text ↑
e1

“xylem cell protoplasts from poplar stem”

✓ located verbatim in the source · abstract, characters 479–518 · show in text ↑
Method / resourceauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The FACS method can be used to study programmed cell death in woody plants.

Taxon
poplarPopuluse1
Outcome
study PCDe0
Value
PCDe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the newly developed fluorescence-activated cell sorting (FACS) method can be used to study PCD in woody plants”

✓ located verbatim in the source · abstract, characters 1058–1168 · show in text ↑
e1

“xylem cell protoplasts from poplar stem”

✓ located verbatim in the source · abstract, characters 479–518 · show in text ↑