Paper · 2023 · Microorganisms

Rhizobacterial Colonization and Management of Bacterial Speck Pathogen in Tomato by Pseudomonas spp.

Mohsen M. Elsharkawy; Amr A. Khedr; Farid Mehiar; et al.

8
claims
14
verbatim quotes
16
citations
3
research areas
✓
Open access · cc-by

Abstract

Plants and soil microorganisms interact at every stage of growth. Pseudomonas spp. are highly regarded for their ability to increase crop production and protection from diseases. The aim of this study is to understand the mechanisms of the rhizobacterial colonization of tomato roots via chemotaxis assay and the activation of tomato resistance against the pathogenic bacterium, Pseudomonas syringae pv. tomato DC3000 (Pst). The capillary assay was used to evaluate the chemotaxis response of PGPRs (plant growth-promoting rhizobacteria). The activities of defense enzymes and the expressions of PR (pathogenesis-related) genes were measured using real-time qPCR. Chemotactic responses to malic and citric acids (the most important root exudates found in different plant species) at low concentrations varied substantially among the rhizobacterial isolates (63 species). Beneficial isolates including Pseudomonas resinovorans A5, P. vranovensis A30, P. resinovorans A28, P. umsongensis O26, P. stutzeri N42, and P. putida T15 reacted well to different concentrations of root exudates. P. putida T15 demonstrated the most potent anti-Pst activity. At three and six days after inoculation, the greatest levels of polyphenol oxidase and peroxidase activity were reported in the A5 and T15 groups. In tomato, transcript levels of four PR (pathogenesis-related) genes were elevated by rhizobacterial treatments. PGPR isolates alone or in combination with BABA (β-amino butyric acid) up-regulated the transcriptions of PR1, PR2, LOX, and PAL genes. Treatments with N42 and T15 resulted in the greatest improvements in tomato growth and yield traits. In conclusion, the results explain the mechanisms of rhizobacterial colonization for the improved management of Pst. Rhizobacterial isolates play a role in tomato’s resistance to Pst via salicylic acid and jasmonic acid pathways.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Chemotactic responses to malic and citric acids varied substantially among the rhizobacterial isolates.

Interactor
rhizobacterial isolatese2symbiont
Outcome
chemotactic responses to malic and citric acidse2
Qualifier
varied substantiallye2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the mechanisms of the rhizobacterial colonization of tomato roots via chemotaxis assay”

✓ located verbatim in the source · abstract, characters 218–304 · show in text ↑
e2

“Chemotactic responses to malic and citric acids (the most important root exudates found in different plant species) at low concentrations varied substantially among the rhizobacterial isolates (63 species)”

✓ located verbatim in the source · abstract, characters 664–869 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Pseudomonas putida T15 showed the most potent anti-Pst activity.

Treatment
P. putida T15e3
Interactor
Pseudomonas syringae pv. tomato DC3000Pseudomonas syringae pv. tomato str. DC3000e1pathogen
Second interactor
P. putida T15Pseudomonas putidae3biocontrol_agent
Outcome
anti-Pst activitye3
Direction
most potente3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas putida
Pseudomonas putida · Second interactorMroghair · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“against the pathogenic bacterium, Pseudomonas syringae pv. tomato DC3000 (Pst)”

✓ located verbatim in the source · abstract, characters 345–423 · show in text ↑
e3

“P. putida T15 demonstrated the most potent anti-Pst activity”

✓ located verbatim in the source · abstract, characters 1085–1145 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The greatest polyphenol oxidase and peroxidase activity at three and six days after inoculation occurred in the A5 and T15 groups.

Treatment
A5 and T15 groupse4
Outcome
polyphenol oxidase and peroxidase activitye4
Direction
greatest levelse4
Qualifier
At three and six days after inoculatione4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the mechanisms of the rhizobacterial colonization of tomato roots via chemotaxis assay”

✓ located verbatim in the source · abstract, characters 218–304 · show in text ↑
e4

“At three and six days after inoculation, the greatest levels of polyphenol oxidase and peroxidase activity were reported in the A5 and T15 groups”

✓ located verbatim in the source · abstract, characters 1147–1292 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Transcript levels of four PR genes in tomato were elevated by rhizobacterial treatments.

Treatment
rhizobacterial treatmentse5
Gene
PR (pathogenesis-related) genese5
Outcome
transcript levels of four PR (pathogenesis-related) genese5
Direction
elevatede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e5

“In tomato, transcript levels of four PR (pathogenesis-related) genes were elevated by rhizobacterial treatments”

✓ located verbatim in the source · abstract, characters 1294–1405 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

PGPR isolates alone or with BABA up-regulated PR1, PR2, LOX and PAL gene transcription in tomato.

Treatment
PGPR isolates alone or in combination with BABA (β-amino butyric acid)e6
Gene
PR1, PR2, LOX, and PALe6
Outcome
transcriptions of PR1, PR2, LOX, and PAL genese6
Direction
up-regulatede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e6

“PGPR isolates alone or in combination with BABA (β-amino butyric acid) up-regulated the transcriptions of PR1, PR2, LOX, and PAL genes”

✓ located verbatim in the source · abstract, characters 1407–1541 · show in text ↑
e5

“In tomato, transcript levels of four PR (pathogenesis-related) genes were elevated by rhizobacterial treatments”

✓ located verbatim in the source · abstract, characters 1294–1405 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Treatments with N42 and T15 gave the greatest improvements in tomato growth and yield traits.

Treatment
N42 and T15e7
Outcome
growth and yield traitse7
Direction
greatest improvementse7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e7

“Treatments with N42 and T15 resulted in the greatest improvements in tomato growth and yield traits”

✓ located verbatim in the source · abstract, characters 1543–1642 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

Rhizobacterial isolates contribute to tomato resistance to Pst via the salicylic acid and jasmonic acid pathways.

Interactor
Pseudomonas syringae pv. tomato DC3000Pseudomonas syringae pv. tomato str. DC3000e1pathogen
Compound
salicylic acid and jasmonic acide2
Outcome
resistance to Pste2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“Rhizobacterial isolates play a role in tomato’s resistance to Pst via salicylic acid and jasmonic acid pathways”

✓ located verbatim in the source · abstract, characters 1761–1872 · show in text ↑
e1

“against the pathogenic bacterium, Pseudomonas syringae pv. tomato DC3000 (Pst)”

✓ located verbatim in the source · abstract, characters 345–423 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Beneficial rhizobacterial isolates reacted well to different concentrations of root exudates.

Material
Pseudomonas resinovorans A5, P. vranovensis A30, P. resinovorans A28, P. umsongensis O26, P. stutzeri N42, and P. putida T15e1
Outcome
reacted welle1
Qualifier
to different concentrations of root exudatese1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the mechanisms of the rhizobacterial colonization of tomato roots via chemotaxis assay”

✓ located verbatim in the source · abstract, characters 218–304 · show in text ↑
e1

“Beneficial isolates including Pseudomonas resinovorans A5, P. vranovensis A30, P. resinovorans A28, P. umsongensis O26, P. stutzeri N42, and P. putida T15 reacted well to different concentrations of root exudates”

✓ located verbatim in the source · abstract, characters 871–1083 · show in text ↑

3-aminobutanoic acid · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

5 papers: 3 positive, 2 negative or no effect

2 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

1 paper more in this group

See all 5 papers →

inoculation · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

58 papers: 49 positive, 9 negative or no effect

48 papers in the same direction as this paper · 9 in the opposite direction

  1. positive
  2. no effect
  3. no effect

54 papers more in this group

See all 58 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.