Paper · 2022 · Frontiers in Microbiology

Silicon fertilizer mediated structural variation and niche differentiation in the rhizosphere and endosphere bacterial microbiome and metabolites of sugarcane

Zhaonian Yuan; Ziqin Pang; Nyumah Fallah; et al.

11
claims
21
verbatim quotes
28
citations
3
research areas
✓
Open access · cc-by

Abstract

The microbiomes of plant are potential determinants of plant growth, productivity, and health. They provide plants with a plethora of functional capacities, namely, phytopathogens suppression, access to low-abundance nutrients, and resistance to environmental stressors. However, a comprehensive insight into the structural compositions of the bacterial abundance, diversity, richness, and function colonizing various microenvironments of plants, and specifically their association with bioactive compounds and soil edaphic factors under silicon (Si) amendment remains largely inconclusive. Here, high-throughput sequencing technology and nontargeted metabolite profiling method were adopted to test the hypotheses regarding microbiome niche abundance, diversity, richness, function, and their association with bioactive compounds and soil edaphic factors within different ecological niches (leaf, stem, root, rhizosphere, and bulk soils) under Si amendment during cane growth were we addressed. Our results demonstrated that Si correspondingly increased sugarcane theoretical production and yield, and remarkably enhanced soil nutrient status, especially Si, AP, and AK. It was also observed that bacterial diversity demonstrated tissue-dependent distribution patterns, with the bulk soil, rhizosphere soil, and root endosphere revealing the highest amount of bacterial diversity compared with the stem and leaf tissues. Moreover, Si exhibited the advantage of considerably promoting bacterial abundance in the various plant compartments. Co-occurrence interactions demonstrated that Si application has the potential to increase bacterial diversity maintenance, coexistence, and plant-soil systems bacteria connections, thereby increasing the functional diversity in the various plant tissues, which, in turn, could trigger positive growth effects in plants. Network analysis further revealed that metabolite profiles exhibited a strong association with bacterial community structures. It was also revealed that Si content had a considerable positive association with bacterial structures. Our findings suggest that the dynamic changes in microbe's community composition in different plant and soil compartments were compartment-specific. Our study provides comprehensive empirical evidence of the significance of Si in agriculture and illuminated on differential metabolite profiles and soil microbe's relationship.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 11

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon increased sugarcane theoretical production.

Taxon
sugarcanee0
Treatment
Sie0
Outcome
sugarcane theoretical productione0
Direction
increasede0

Not reportedComparator

Verbatim

e0

“Si correspondingly increased sugarcane theoretical production and yield”

✓ located verbatim in the source · abstract, characters 1026–1097 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 149–158 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon increased sugarcane yield.

Taxon
sugarcanee0
Treatment
Sie0
Outcome
yielde0
Direction
increasede0

Not reportedComparator

Verbatim

e0

“Si correspondingly increased sugarcane theoretical production and yield”

✓ located verbatim in the source · abstract, characters 1026–1097 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 149–158 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon enhanced soil nutrient status, especially Si, AP and AK.

Taxon
sugarcanee0
Treatment
Sie0
Outcome
soil nutrient status, especially Si, AP, and AKe0
Direction
enhancede0

Not reportedComparator

Verbatim

e0

“Si correspondingly increased sugarcane theoretical production and yield, and remarkably enhanced soil nutrient status, especially Si, AP, and AK.”

✓ located verbatim in the source · abstract, characters 1026–1171 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Bacterial diversity was highest in bulk soil, rhizosphere and roots compared with stems and leaves.

Taxon
sugarcanet0
Organ / stage
root endospheree0
Outcome
bacterial diversitye0
Direction
higheste0
Comparator
stem and leaf tissuese0

Verbatim

e0

“bacterial diversity demonstrated tissue-dependent distribution patterns, with the bulk soil, rhizosphere soil, and root endosphere revealing the highest amount of bacterial diversity compared with the stem and leaf tissues.”

✓ located verbatim in the source · abstract, characters 1198–1421 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 149–158 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon promoted bacterial abundance across plant compartments.

Taxon
sugarcanet0
Treatment
Sie0
Outcome
bacterial abundancee0
Direction
promotinge0

Not reportedComparator

Verbatim

e0

“Si exhibited the advantage of considerably promoting bacterial abundance in the various plant compartments.”

✓ located verbatim in the source · abstract, characters 1432–1539 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 149–158 · show in text ↑
Associationauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Silicon application could increase bacterial diversity maintenance.

Taxon
sugarcanet0
Treatment
Si applicatione0
Outcome
bacterial diversity maintenancee0
Direction
increasee0

Verbatim

e0

“Si application has the potential to increase bacterial diversity maintenance, coexistence, and plant-soil systems bacteria connections”

✓ located verbatim in the source · abstract, characters 1585–1719 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 149–158 · show in text ↑
Associationauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Silicon application could increase bacterial coexistence.

Taxon
sugarcanet0
Treatment
Si applicatione0
Outcome
coexistencee0
Direction
increasee0

Verbatim

e0

“Si application has the potential to increase bacterial diversity maintenance, coexistence, and plant-soil systems bacteria connections”

✓ located verbatim in the source · abstract, characters 1585–1719 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 149–158 · show in text ↑
Associationauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Silicon application could increase plant-soil bacterial connections.

Taxon
sugarcanet0
Treatment
Si applicatione0
Outcome
plant-soil systems bacteria connectionse0
Direction
increasee0

Verbatim

e0

“Si application has the potential to increase bacterial diversity maintenance, coexistence, and plant-soil systems bacteria connections”

✓ located verbatim in the source · abstract, characters 1585–1719 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 149–158 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Metabolite profiles were strongly associated with bacterial community structures.

Taxon
sugarcanet0
Outcome
bacterial community structurese0
Qualifier
metabolite profilese0

Not reportedMaterialGeneCompoundOrgan / stageInteractorTreatmentComparatorSettingDirection

Verbatim

e0

“metabolite profiles exhibited a strong association with bacterial community structures.”

✓ located verbatim in the source · abstract, characters 1899–1986 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 149–158 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon content was positively associated with bacterial structures.

Taxon
sugarcanet0
Compound
Sie0
Outcome
bacterial structurese0

Not reportedDirection

Verbatim

e0

“Si content had a considerable positive association with bacterial structures.”

✓ located verbatim in the source · abstract, characters 2013–2090 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 149–158 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Microbial community composition changes were specific to plant and soil compartments.

Taxon
sugarcanet0
Outcome
microbe's community compositione0
Qualifier
compartment-specifice0

Verbatim

e0

“dynamic changes in microbe's community composition in different plant and soil compartments were compartment-specific.”

✓ located verbatim in the source · abstract, characters 2121–2239 · show in text ↑
t0

“sugarcane”

✓ located verbatim in the source · title, characters 149–158 · show in text ↑

silicon atom · yield · Saccharum officinarum (sugarcane)Results differ

21 papers: 19 positive, 2 negative or no effect

18 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. no effect
  3. no effect

17 papers more in this group

See all 21 papers →

silicon atom · nutrient: content · Saccharum officinarum (sugarcane)Positive and negative results

19 papers: 17 positive, 2 negative or no effect

16 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

15 papers more in this group

See all 19 papers →

silicon atom · soil: biology · Saccharum officinarum (sugarcane)Results agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.