Paper · 2002 · PLANT PHYSIOLOGY

An Oligopeptide Transporter Gene Family in Arabidopsis

S. Koh

8
claims
13
verbatim quotes
14
citations
2
research areas
✓
Open access

Abstract

We have identified nine oligopeptide transporter (OPT) orthologs (AtOPT1 to AtOPT9) in Arabidopsis. These proteins show significant sequence similarity to OPTs of Candida albicans (CaOpt1p), Schizosaccharomyces pombe (Isp4p), and Saccharomyces cerevisiae (Opt1p and Opt2p). Hydrophilicity plots of the OPTs suggest that they are integral membrane proteins with 12 to 14 transmembrane domains. Sequence comparisons showed that the AtOPTs form a distinct subfamily when compared with the fungal OPTs. Two highly conserved motifs (NPG and KIPPR) were found among all OPT members. The identification of multiple OPTs in Arabidopsis suggests that they may play different functional roles. This idea is supported by the fact that AtOPTs have a distinct, tissue-specific expression pattern. The cDNAs encoding seven of the AtOPTs were cloned into a yeast vector under the control of a constitutive promoter. AtOPT4 expressed in S. cerevisiae mediated the uptake of KLG-[ 3 H]L. Similarly, expression of five of the seven AtOPT proteins expressed in yeast conferred the ability to uptake tetraand pentapeptides as measured by growth. This study provides new evidence for multiple peptide transporter systems in Arabidopsis, suggesting an important physiological role for small peptides in plants.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Nine oligopeptide transporter orthologs (AtOPT1 to AtOPT9) were identified in Arabidopsis.

Taxon
ArabidopsisArabidopsise1
Gene
AtOPT1 to AtOPT9e1
Outcome
oligopeptide transporter (OPT) orthologse1
Value
ninee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“We have identified nine oligopeptide transporter (OPT) orthologs (AtOPT1 to AtOPT9) in Arabidopsis”

✓ located verbatim in the source · abstract, characters 0–98 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The AtOPTs form a distinct subfamily compared with fungal OPTs.

Taxon
ArabidopsisArabidopsist0
Gene
AtOPTse2
Outcome
distinct subfamilye2
Comparator
fungal OPTse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“An Oligopeptide Transporter Gene Family in Arabidopsis”

✓ located verbatim in the source · title, characters 0–54 · show in text ↑
e2

“Sequence comparisons showed that the AtOPTs form a distinct subfamily when compared with the fungal OPTs”

✓ located verbatim in the source · abstract, characters 393–497 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Two highly conserved motifs (NPG and KIPPR) were found among all OPT members.

Taxon
ArabidopsisArabidopsist0
Gene
NPG and KIPPRe3
Outcome
highly conserved motifse3
Value
Twoe3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“An Oligopeptide Transporter Gene Family in Arabidopsis”

✓ located verbatim in the source · title, characters 0–54 · show in text ↑
e3

“Two highly conserved motifs (NPG and KIPPR) were found among all OPT members”

✓ located verbatim in the source · abstract, characters 499–575 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The AtOPTs have a distinct, tissue-specific expression pattern.

Taxon
ArabidopsisArabidopsist0
Gene
AtOPTse4
Outcome
expression patterne4
Qualifier
tissue-specifice4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“An Oligopeptide Transporter Gene Family in Arabidopsis”

✓ located verbatim in the source · title, characters 0–54 · show in text ↑
e4

“This idea is supported by the fact that AtOPTs have a distinct, tissue-specific expression pattern”

✓ located verbatim in the source · abstract, characters 684–782 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

AtOPT4 expressed in yeast mediated uptake of KLG-[3H]L.

Taxon
ArabidopsisArabidopsist0
Treatment
expressed in S. cerevisiaee5
Gene
AtOPT4e5
Outcome
uptake of KLG-[ 3 H]Le5

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“An Oligopeptide Transporter Gene Family in Arabidopsis”

✓ located verbatim in the source · title, characters 0–54 · show in text ↑
e5

“AtOPT4 expressed in S. cerevisiae mediated the uptake of KLG-[ 3 H]L”

✓ located verbatim in the source · abstract, characters 901–969 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Expression of five of the seven AtOPT proteins in yeast conferred the ability to take up tetra- and pentapeptides, as measured by growth.

Taxon
ArabidopsisArabidopsist0
Treatment
expression of five of the seven AtOPT proteins expressed in yeaste6
Gene
AtOPT proteinse6
Outcome
ability to uptake tetraand pentapeptidese6
Value
five of the sevene6
Qualifier
as measured by growthe6

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“An Oligopeptide Transporter Gene Family in Arabidopsis”

✓ located verbatim in the source · title, characters 0–54 · show in text ↑
e6

“expression of five of the seven AtOPT proteins expressed in yeast conferred the ability to uptake tetraand pentapeptides as measured by growth”

✓ located verbatim in the source · abstract, characters 982–1124 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

This study provides new evidence for multiple peptide transporter systems in Arabidopsis.

Taxon
ArabidopsisArabidopsise7
Outcome
multiple peptide transporter systemse7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e7

“This study provides new evidence for multiple peptide transporter systems in Arabidopsis, suggesting an important physiological role for small peptides in plants”

✓ located verbatim in the source · abstract, characters 1126–1287 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

Small peptides may have an important physiological role in Arabidopsis.

Taxon
ArabidopsisArabidopsise7
Compound
small peptidese7
Outcome
an important physiological role for small peptidese7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e7

“This study provides new evidence for multiple peptide transporter systems in Arabidopsis, suggesting an important physiological role for small peptides in plants”

✓ located verbatim in the source · abstract, characters 1126–1287 · show in text ↑

transgenic · nutrient: content · ArabidopsisPositive and negative results

17 papers: 11 positive, 6 negative or no effect

10 papers in the same direction as this paper · 6 in the opposite direction

  1. negative
  2. negative
  3. negative

13 papers more in this group

See all 17 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.