Paper · 2000 · Journal of Experimental Botany

Induced activity of adenine phosphoribosyltransferase (APRT) in iron‐deficient barley roots: a possible role for phytosiderophore production

Reiko Itai; Kazuya Suzuki; Hirotaka Yamaguchi; et al.

10
claims
12
verbatim quotes
2
citations
3
research areas
—
Not open access

Abstract

To isolate the genes involved in the response of graminaceous plants to Fe‐deficient stress, a protein induced by Fe‐deficiency treatment was isolated from barley (Hordeum vulgare L.) roots. Based on the partial amino acid sequence of this protein, a cDNA (HvAPT1) encoding adenine phosphoribosyltransferase (APRT: EC 2.4.2.7) was cloned from a cDNA library prepared from Fe‐deficient barley roots. Southern analysis suggested that there were at least two genes encoding APRT in barley. Fe deficiency increased HvAPT1 expression in barley roots and resupplying Fe to the Fe‐deficient plants rapidly negated the increase in HvAPT1 mRNA. Analysis of localization of HvAPT1‐ sGFP fusion proteins in tobacco BY‐2 cells indicated that the protein from HvAPT1 was localized in the cytoplasm of cells. Consistent with the results of Northern analysis, the enzymatic activity of APRT in barley roots was remarkably increased by Fe deficiency. This induction of APRT activity by Fe deficiency was also observed in roots of other graminaceous plants such as rye, maize, and rice. In contrast, the induction was not observed to occur in the roots of a non‐graminaceous plant, tobacco. Graminaceous plants generally synthesize the mugineic acid family phytosiderophores (MAs) in roots under Fe‐deficient conditions. In this paper, a possible role of HvAPT1 in the biosynthesis of MAs related to adenine salvage in the methionine cycle is discussed.

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Claims 10

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

HvAPT1 encoding APRT was cloned from iron deficient barley roots.

Organ / stage
rootse0
Gene
HvAPT1e0
Outcome
a cDNA (HvAPT1) encoding adenine phosphoribosyltransferasee0
Value
a cDNAe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“a cDNA (HvAPT1) encoding adenine phosphoribosyltransferase (APRT: EC 2.4.2.7) was cloned from a cDNA library prepared from Fe‐deficient barley roots”

✓ located verbatim in the source · abstract, characters 249–397 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

At least two genes encode APRT in barley.

Gene
APRTe0
Outcome
at least two genes encoding APRTe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Southern analysis suggested that there were at least two genes encoding APRT in barley”

✓ located verbatim in the source · abstract, characters 399–485 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Iron deficiency increased HvAPT1 expression in barley roots.

Organ / stage
rootse0
Treatment
Fe deficiencye0
Gene
HvAPT1e0
Outcome
HvAPT1 expressione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Fe deficiency increased HvAPT1 expression in barley roots”

✓ located verbatim in the source · abstract, characters 487–544 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Resupplying iron rapidly negated the increase in HvAPT1 mRNA in deficient plants.

Treatment
resupplying Fee0
Gene
HvAPT1e0
Outcome
HvAPT1 mRNAe0
Direction
negated the increasee0
Comparator
Fe‐deficient plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“resupplying Fe to the Fe‐deficient plants rapidly negated the increase in HvAPT1 mRNA”

✓ located verbatim in the source · abstract, characters 549–634 · show in text ↑
t0

“barley roots”

✓ located verbatim in the source · title, characters 79–91 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The HvAPT1 protein localized in the cytoplasm of tobacco BY 2 cells.

Material
BY‐2e0
Gene
HvAPT1e0
Outcome
localized in the cytoplasm of cellse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“HvAPT1‐ sGFP fusion proteins in tobacco BY‐2 cells indicated that the protein from HvAPT1 was localized in the cytoplasm of cells”

✓ located verbatim in the source · abstract, characters 664–793 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Iron deficiency markedly increased APRT enzymatic activity in barley roots.

Organ / stage
rootse0
Treatment
Fe deficiencye0
Gene
APRTe0
Outcome
enzymatic activity of APRTe0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“enzymatic activity of APRT in barley roots was remarkably increased by Fe deficiency”

✓ located verbatim in the source · abstract, characters 849–933 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Iron deficiency induced APRT activity in rye roots.

Organ / stage
rootse0
Treatment
Fe deficiencye0
Gene
APRTe0
Outcome
APRT activitye0
Direction
inductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Secale cereale
Secale cereale · TaxonLSDSL · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This induction of APRT activity by Fe deficiency was also observed in roots of other graminaceous plants such as rye, maize, and rice”

✓ located verbatim in the source · abstract, characters 935–1068 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Iron deficiency induced APRT activity in maize roots.

Taxon
maizeZea mayse0
Organ / stage
rootse0
Treatment
Fe deficiencye0
Gene
APRTe0
Outcome
APRT activitye0
Direction
inductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“This induction of APRT activity by Fe deficiency was also observed in roots of other graminaceous plants such as rye, maize, and rice”

✓ located verbatim in the source · abstract, characters 935–1068 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Iron deficiency induced APRT activity in rice roots.

Organ / stage
rootse0
Treatment
Fe deficiencye0
Gene
APRTe0
Outcome
APRT activitye0
Direction
inductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“This induction of APRT activity by Fe deficiency was also observed in roots of other graminaceous plants such as rye, maize, and rice”

✓ located verbatim in the source · abstract, characters 935–1068 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Iron deficiency did not induce APRT activity in tobacco roots.

Organ / stage
rootse0
Treatment
Fe deficiencye1
Gene
APRTe1
Outcome
APRT activitye1
Direction
not observede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“the induction was not observed to occur in the roots of a non‐graminaceous plant, tobacco”

✓ located verbatim in the source · abstract, characters 1083–1172 · show in text ↑
e1

“This induction of APRT activity by Fe deficiency was also observed in roots of other graminaceous plants such as rye, maize, and rice”

✓ located verbatim in the source · abstract, characters 935–1068 · show in text ↑

iron atom · physiology: enzyme activity · Hordeum vulgare (barley)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

This paper is about lacking the nutrient, so it counts the other way round here.

  1. positive
See all 2 papers →

iron atom · molecular: metabolites · Nicotiana tabacum (tobacco)Positive and negative results

5 papers: 2 positive, 3 negative or no effect

2 papers in the same direction as this paper · 2 in the opposite direction

This paper is about lacking the nutrient, so it counts the other way round here.

  1. positive
  2. positive
  3. no effect

1 paper more in this group

See all 5 papers →

iron atom · molecular: metabolites · Zea mays (maize)Positive and negative results

13 papers: 9 positive, 4 negative or no effect

3 papers in the same direction as this paper · 9 in the opposite direction

This paper is about lacking the nutrient, so it counts the other way round here.

  1. positive
  2. positive
  3. positive

9 papers more in this group

See all 13 papers →

iron atom · molecular: metabolites · Oryza sativa (rice)Positive and negative results

31 papers: 18 positive, 13 negative or no effect

12 papers in the same direction as this paper · 18 in the opposite direction

This paper is about lacking the nutrient, so it counts the other way round here.

  1. positive
  2. positive
  3. positive

27 papers more in this group

See all 31 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.