Paper · 2021 · PLoS ONE

Prevalence of toxigenic fungi and mycotoxins in Arabic coffee (Coffea arabica): Protective role of traditional coffee roasting, brewing and bacterial volatiles

Wadha Al Attiya; Zahoor Ul Hassan; Roda Al-Thani; et al.

20
claims
20
verbatim quotes
22
citations
2
research areas
✓
Open access · cc-by

Abstract

Fungal infection and synthesis of mycotoxins in coffee leads to significant economic losses. This study aimed to investigate the prevalence of toxigenic fungi, their metabolites, and the effect of traditional roasting and brewing on ochratoxin A (OTA) and aflatoxins (AFs) contents of naturally contaminated coffee samples. In addition, in vivo biocontrol assays were performed to explore the antagonistic activities of Bacillus simplex 350-3 (BS350-3) on the growth and mycotoxins synthesis of Aspergillus ochraceus and A. flavus. The relative density of A. niger, A. flavus, Penicillium verrucosum and A. carbonarius on green coffee bean was 60.82%, 7.21%, 3.09% and 1.03%, respectively. OTA contents were lowest in green coffee beans (2.15 μg/kg), followed by roasted (2.76 μg/kg) and soluble coffee (8.95 μg/kg). Likewise, AFs levels were highest in soluble coffee (90.58 μg/kg) followed by roasted (33.61 μg/kg) and green coffee (9.07 μg/kg). Roasting naturally contaminated coffee beans at three traditional methods; low, medium and high, followed by brewing resulted in reduction of 58.74% (3.50 μg/kg), 60.88% (3.72 μg/kg) and 64.70% (4.11 μg/kg) in OTA and 40.18% (34.65 μg/kg), 47.86% (41.17 μg/kg) and 62.38% (53.73 μg/kg) AFs contents, respectively. Significant inhibitions of AFs and OTA synthesis by A. flavus and A. carbonarius, respectively, on infected coffee beans were observed in presence of Bacillus simplex BS350-3 volatiles. Gas chromatography mass spectrochemistry (GC-MS/MS) analysis of head-space BS350-3 volatiles showed quinoline, benzenemethanamine and 1-Octadecene as bioactive antifungal molecules. These findings suggest that marketed coffee samples are generally contaminated with OTA and AFs, with a significant level of roasted and soluble coffee contaminated above EU permissible limits for OTA. Further, along with coffee roasting and brewing; microbial volatiles can be optimized to minimize the dietary exposure to mycotoxins.

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Claims 20

Observationobservedoriginal resultmeasured

Claim · model-written summary

A. niger accounted for 60.82% relative density on green coffee beans.

Taxon
coffeeCoffeae0
Organ / stage
green coffee beane0
Interactor
A. nigerAspergillus nigere0pathogen
Outcome
relative densitye0
Value
60.82%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗
Aspergillus niger
Aspergillus niger · InteractorNo machine-readable author provided. Y tambe assumed (based on copyright claims). · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The relative density of A. niger, A. flavus, Penicillium verrucosum and A. carbonarius on green coffee bean was 60.82%, 7.21%, 3.09% and 1.03%, respectively.”

✓ located verbatim in the source · abstract, characters 532–689 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A. flavus accounted for 7.21% relative density on green coffee beans.

Taxon
coffeeCoffeae0
Organ / stage
green coffee beane0
Interactor
A. flavusAspergillus flavuse0pathogen
Outcome
relative densitye0
Value
7.21%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗
Aspergillus flavus
Aspergillus flavus · InteractorUS gov · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The relative density of A. niger, A. flavus, Penicillium verrucosum and A. carbonarius on green coffee bean was 60.82%, 7.21%, 3.09% and 1.03%, respectively.”

✓ located verbatim in the source · abstract, characters 532–689 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Penicillium verrucosum accounted for 3.09% relative density on green coffee beans.

Taxon
coffeeCoffeae0
Organ / stage
green coffee beane0
Interactor
Penicillium verrucosumPenicillium verrucosume0pathogen
Outcome
relative densitye0
Value
3.09%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The relative density of A. niger, A. flavus, Penicillium verrucosum and A. carbonarius on green coffee bean was 60.82%, 7.21%, 3.09% and 1.03%, respectively.”

✓ located verbatim in the source · abstract, characters 532–689 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A. carbonarius accounted for 1.03% relative density on green coffee beans.

Taxon
coffeeCoffeae0
Organ / stage
green coffee beane0
Interactor
A. carbonariusAspergillus carbonariuse0pathogen
Outcome
relative densitye0
Value
1.03%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The relative density of A. niger, A. flavus, Penicillium verrucosum and A. carbonarius on green coffee bean was 60.82%, 7.21%, 3.09% and 1.03%, respectively.”

✓ located verbatim in the source · abstract, characters 532–689 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OTA was lowest in green coffee beans at 2.15 μg/kg.

Taxon
coffeeCoffeae0
Organ / stage
green coffee beanse0
Outcome
OTA contentse0
Direction
loweste0
Value
2.15 μg/kge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“OTA contents were lowest in green coffee beans (2.15 μg/kg), followed by roasted (2.76 μg/kg) and soluble coffee (8.95 μg/kg).”

✓ located verbatim in the source · abstract, characters 690–816 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OTA content was 2.76 μg/kg in roasted coffee.

Taxon
coffeeCoffeae0
Outcome
OTA contentse0
Value
2.76 μg/kge0
Qualifier
roastede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“OTA contents were lowest in green coffee beans (2.15 μg/kg), followed by roasted (2.76 μg/kg) and soluble coffee (8.95 μg/kg).”

✓ located verbatim in the source · abstract, characters 690–816 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OTA content was 8.95 μg/kg in soluble coffee.

Taxon
coffeeCoffeae0
Outcome
OTA contentse0
Value
8.95 μg/kge0
Qualifier
soluble coffeee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“OTA contents were lowest in green coffee beans (2.15 μg/kg), followed by roasted (2.76 μg/kg) and soluble coffee (8.95 μg/kg).”

✓ located verbatim in the source · abstract, characters 690–816 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AFs were highest in soluble coffee at 90.58 μg/kg.

Taxon
coffeeCoffeae0
Outcome
AFs levelse0
Direction
higheste0
Value
90.58 μg/kge0
Qualifier
soluble coffeee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AFs levels were highest in soluble coffee (90.58 μg/kg) followed by roasted (33.61 μg/kg) and green coffee (9.07 μg/kg).”

✓ located verbatim in the source · abstract, characters 827–947 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AFs content was 33.61 μg/kg in roasted coffee.

Taxon
coffeeCoffeae0
Outcome
AFs levelse0
Value
33.61 μg/kge0
Qualifier
roastede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AFs levels were highest in soluble coffee (90.58 μg/kg) followed by roasted (33.61 μg/kg) and green coffee (9.07 μg/kg).”

✓ located verbatim in the source · abstract, characters 827–947 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AFs content was 9.07 μg/kg in green coffee.

Taxon
coffeeCoffeae0
Outcome
AFs levelse0
Value
9.07 μg/kge0
Qualifier
green coffeee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AFs levels were highest in soluble coffee (90.58 μg/kg) followed by roasted (33.61 μg/kg) and green coffee (9.07 μg/kg).”

✓ located verbatim in the source · abstract, characters 827–947 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Low roasting followed by brewing reduced OTA by 58.74%.

Taxon
coffeeCoffeae0
Treatment
lowe0
Outcome
OTAe0
Direction
reductione0
Value
58.74%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Roasting naturally contaminated coffee beans at three traditional methods; low, medium and high, followed by brewing resulted in reduction of 58.74% (3.50 μg/kg), 60.88% (3.72 μg/kg) and 64.70% (4.11 μg/kg) in OTA”

✓ located verbatim in the source · abstract, characters 948–1161 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Medium roasting followed by brewing reduced OTA by 60.88%.

Taxon
coffeeCoffeae0
Treatment
mediume0
Outcome
OTAe0
Direction
reductione0
Value
60.88%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Roasting naturally contaminated coffee beans at three traditional methods; low, medium and high, followed by brewing resulted in reduction of 58.74% (3.50 μg/kg), 60.88% (3.72 μg/kg) and 64.70% (4.11 μg/kg) in OTA”

✓ located verbatim in the source · abstract, characters 948–1161 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

High roasting followed by brewing reduced OTA by 64.70%.

Taxon
coffeeCoffeae0
Treatment
highe0
Outcome
OTAe0
Direction
reductione0
Value
64.70%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Roasting naturally contaminated coffee beans at three traditional methods; low, medium and high, followed by brewing resulted in reduction of 58.74% (3.50 μg/kg), 60.88% (3.72 μg/kg) and 64.70% (4.11 μg/kg) in OTA”

✓ located verbatim in the source · abstract, characters 948–1161 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Low roasting followed by brewing reduced AFs by 40.18%.

Treatment
lowe0
Outcome
AFs contentse0
Direction
reductione0
Value
40.18%e0

Not reportedTaxonComparator

Verbatim

e0

“low, medium and high, followed by brewing resulted in reduction of 58.74% (3.50 μg/kg), 60.88% (3.72 μg/kg) and 64.70% (4.11 μg/kg) in OTA and 40.18% (34.65 μg/kg), 47.86% (41.17 μg/kg) and 62.38% (53.73 μg/kg) AFs contents”

✓ located verbatim in the source · abstract, characters 1023–1246 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Medium roasting followed by brewing reduced AFs by 47.86%.

Treatment
mediume0
Outcome
AFs contentse0
Direction
reductione0
Value
47.86%e0

Not reportedTaxonComparator

Verbatim

e0

“low, medium and high, followed by brewing resulted in reduction of 58.74% (3.50 μg/kg), 60.88% (3.72 μg/kg) and 64.70% (4.11 μg/kg) in OTA and 40.18% (34.65 μg/kg), 47.86% (41.17 μg/kg) and 62.38% (53.73 μg/kg) AFs contents”

✓ located verbatim in the source · abstract, characters 1023–1246 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

High roasting followed by brewing reduced AFs by 62.38%.

Treatment
highe0
Outcome
AFs contentse0
Direction
reductione0
Value
62.38%e0

Not reportedTaxonComparator

Verbatim

e0

“low, medium and high, followed by brewing resulted in reduction of 58.74% (3.50 μg/kg), 60.88% (3.72 μg/kg) and 64.70% (4.11 μg/kg) in OTA and 40.18% (34.65 μg/kg), 47.86% (41.17 μg/kg) and 62.38% (53.73 μg/kg) AFs contents”

✓ located verbatim in the source · abstract, characters 1023–1246 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Bacillus simplex BS350-3 volatiles significantly inhibited AF synthesis by A. flavus on infected coffee beans.

Taxon
coffeeCoffeae0
Treatment
Bacillus simplex BS350-3 volatilese0
Interactor
A. flavusAspergillus flavuse0pathogen
Second interactor
Bacillus simplex BS350-3Peribacillus simplexe0biocontrol_agent
Outcome
AFse0
Direction
inhibitionse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗
Aspergillus flavus
Aspergillus flavus · InteractorUS gov · Public domain · Wikimedia Commons ↗
Peribacillus simplex
Peribacillus simplex · Second interactorBevan Weir ( bevan ) · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Significant inhibitions of AFs and OTA synthesis by A. flavus and A. carbonarius, respectively, on infected coffee beans were observed in presence of Bacillus simplex BS350-3 volatiles.”

✓ located verbatim in the source · abstract, characters 1262–1447 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Bacillus simplex BS350-3 volatiles significantly inhibited OTA synthesis by A. carbonarius on infected coffee beans.

Taxon
coffeeCoffeae0
Treatment
Bacillus simplex BS350-3 volatilese0
Interactor
A. carbonariusAspergillus carbonariuse0pathogen
Second interactor
Bacillus simplex BS350-3Peribacillus simplexe0biocontrol_agent
Outcome
OTAe0
Direction
inhibitionse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗
Peribacillus simplex
Peribacillus simplex · Second interactorBevan Weir ( bevan ) · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Significant inhibitions of AFs and OTA synthesis by A. flavus and A. carbonarius, respectively, on infected coffee beans were observed in presence of Bacillus simplex BS350-3 volatiles.”

✓ located verbatim in the source · abstract, characters 1262–1447 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Quinoline, benzenemethanamine and 1-Octadecene were identified as antifungal molecules in BS350-3 volatiles.

Interactor
BS350-3e0biocontrol_agent
Outcome
bioactive antifungal moleculese0

Not reportedTaxon

Verbatim

e0

“BS350-3 volatiles showed quinoline, benzenemethanamine and 1-Octadecene as bioactive antifungal molecules.”

✓ located verbatim in the source · abstract, characters 1523–1629 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors propose using microbial volatiles with roasting and brewing to reduce dietary mycotoxin exposure.

Taxon
coffeeCoffeae0
Outcome
minimize the dietary exposure to mycotoxinse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“along with coffee roasting and brewing; microbial volatiles can be optimized to minimize the dietary exposure to mycotoxins.”

✓ located verbatim in the source · abstract, characters 1841–1965 · show in text ↑

Peribacillus simplex · Aspergillus flavus · Coffea (coffee)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Peribacillus simplex · Aspergillus carbonarius · Coffea (coffee)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.