Paper · 2020 · BMC Genomics

Genome-wide analysis of Myo-inositol oxygenase gene family in tomato reveals their involvement in ascorbic acid accumulation

Shoaib Munir; Muhammad Ali Mumtaz; John Kojo Ahiakpa; et al.

9
claims
17
verbatim quotes
82
citations
2
research areas
✓
Open access · cc-by

Abstract

BACKGROUND: Ascorbic acid (Vitamin C, AsA) is an antioxidant metabolite involved in plant development and environmental stimuli. AsA biosynthesis has been well studied in plants, and MIOX is a critical enzyme in plants AsA biosynthesis pathway. However, Myo-inositol oxygenase (MIOX) gene family members and their involvement in AsA biosynthesis and response to abiotic stress remain unclear. RESULTS: In this study, five tomato genes encoding MIOX proteins and possessing MIOX motifs were identified. Structural analysis and distribution mapping showed that 5 MIOX genes contain different intron/exon patterns and unevenly distributed among four chromosomes. Besides, expression analyses indicated the remarkable expression of SlMIOX genes in different plant tissues. Furthermore, transgenic lines were obtained by over-expression of the MIOX4 gene in tomato. The overexpression lines showed a significant increase in total ascorbate in leaves and red fruits compared to control. Expression analysis revealed that increased accumulation of AsA in MIOX4 overexpression lines is possible as a consequence of the multiple genes involved in AsA biosynthesis. Myo inositol (MI) feeding in leaf and fruit implied that the Myo-inositol pathway improved the AsA biosynthesis in leaves and fruits. MIOX4 overexpression lines exhibited a better light response, abiotic stress tolerance, and AsA biosynthesis capacity. CONCLUSIONS: These results showed that MIOX4 transgenic lines contribute to AsA biosynthesis, evident as better light response and improved oxidative stress tolerance. This study provides the first comprehensive analysis of the MIOX gene family and their involvement in ascorbate biosynthesis in tomato.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

Five tomato MIOX genes were identified.

Gene
MIOXe0
Outcome
tomato genes encoding MIOX proteinse0
Value
fivee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“five tomato genes encoding MIOX proteins and possessing MIOX motifs were identified.”

✓ located verbatim in the source · abstract, characters 417–501 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Five MIOX genes differed in intron and exon patterns and were unevenly distributed over four chromosomes.

Gene
MIOXe0
Outcome
different intron/exon patterns and unevenly distributed among four chromosomese0
Value
5e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“5 MIOX genes contain different intron/exon patterns and unevenly distributed among four chromosomes.”

✓ located verbatim in the source · abstract, characters 559–659 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 62–68 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

SlMIOX genes showed expression in different plant tissues.

Organ / stage
different plant tissuese0
Gene
SlMIOXe0
Outcome
expression of SlMIOX genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“expression analyses indicated the remarkable expression of SlMIOX genes in different plant tissues.”

✓ located verbatim in the source · abstract, characters 669–768 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 62–68 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

MIOX4 overexpression significantly increased total ascorbate in leaves and red fruits versus control.

Treatment
overexpression linese0
Outcome
total ascorbate in leaves and red fruitse0
Direction
increasee0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The overexpression lines showed a significant increase in total ascorbate in leaves and red fruits compared to control.”

✓ located verbatim in the source · abstract, characters 861–980 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 62–68 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Increased AsA accumulation in MIOX4 lines was possibly due to multiple biosynthesis genes.

Gene
MIOX4e0
Outcome
increased accumulation of AsAe0
Qualifier
multiple genes involved in AsA biosynthesise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“increased accumulation of AsA in MIOX4 overexpression lines is possible as a consequence of the multiple genes involved in AsA biosynthesis.”

✓ located verbatim in the source · abstract, characters 1015–1155 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 62–68 · show in text ↑
Intervention effectauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Myo inositol feeding implied improvement in AsA biosynthesis in leaf and fruit.

Treatment
Myo inositol (MI) feedinge0
Outcome
AsA biosynthesis in leaves and fruitse0
Direction
improvede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Myo inositol (MI) feeding in leaf and fruit implied that the Myo-inositol pathway improved the AsA biosynthesis in leaves and fruits.”

✓ located verbatim in the source · abstract, characters 1156–1289 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 62–68 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

MIOX4 overexpression lines had better light response.

Gene
MIOX4e0
Outcome
light responsee0
Direction
bettere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“MIOX4 overexpression lines exhibited a better light response, abiotic stress tolerance, and AsA biosynthesis capacity.”

✓ located verbatim in the source · abstract, characters 1290–1408 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 62–68 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

MIOX4 overexpression lines showed abiotic stress tolerance.

Gene
MIOX4e0
Outcome
abiotic stress tolerancee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“MIOX4 overexpression lines exhibited a better light response, abiotic stress tolerance, and AsA biosynthesis capacity.”

✓ located verbatim in the source · abstract, characters 1290–1408 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 62–68 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

MIOX4 overexpression lines showed AsA biosynthesis capacity.

Gene
MIOX4e0
Outcome
AsA biosynthesis capacitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“MIOX4 overexpression lines exhibited a better light response, abiotic stress tolerance, and AsA biosynthesis capacity.”

✓ located verbatim in the source · abstract, characters 1290–1408 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 62–68 · show in text ↑

infection · molecular: metabolites · Solanum lycopersicum (tomato)Positive and negative results

33 papers: 15 positive, 18 negative or no effect

14 papers in the same direction as this paper · 17 in the opposite direction · 1 reporting no difference from an alternative

  1. no effect
  2. negative
  3. negative

29 papers more in this group

See all 33 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.