Paper · 2019 · The Plant Journal

Redox‐sensitive bZIP68 plays a role in balancing stress tolerance with growth in Arabidopsis

Yimin Li; Wuzhen Liu; Huan Zhong; et al.

12
claims
22
verbatim quotes
35
citations
2
research areas
✓
Open access

Abstract

Perturbation of the cellular redox state by stress conditions is sensed by redox-sensitive proteins so that the cell can physiologically respond to stressors. However, the mechanisms linking sensing to response remain poorly understood in plants. Here we report that the transcription factor bZIP68 underwent in vivo oxidation in Arabidopsis cells under oxidative stress which is dependent on its redox-sensitive Cys320 residue. bZIP68 is primarily localized to the nucleus under normal growth conditions in Arabidopsis seedlings. Oxidative stress reduces its accumulation in the nucleus and increases its cytosolic localization. Chromatin immunoprecipitation followed by sequencing (ChIP-seq) revealed that bZIP68 primarily binds to promoter regions containing the core G-box (CACGTG) or G-box-like motif of the genes involved in abiotic and biotic stress responses, photosynthesis, biosynthetic processes, and transcriptional regulation. The bzip68 mutant displayed slower growth under normal conditions but enhanced tolerance to oxidative stress. The results from the ChIP-seq and phenotypic and transcriptome comparison between the bzip68 mutant and wildtype indicate that bZIP68 normally suppresses expression of stress tolerance genes and promotes expression of growth-related genes, whereas its inactivation enhances stress tolerance but suppresses growth. bZIP68 might balance stress tolerance with growth through the extent of its oxidative inactivation according to the environment.

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Claims 12

Observationobservedoriginal resultmeasured

Claim · model-written summary

bZIP68 underwent Cys320-dependent oxidation under oxidative stress in Arabidopsis cells.

Taxon
ArabidopsisArabidopsise0
Treatment
oxidative stresse0
Gene
bZIP68e0
Outcome
in vivo oxidatione0
Qualifier
Cys320 residuee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the transcription factor bZIP68 underwent in vivo oxidation in Arabidopsis cells under oxidative stress which is dependent on its redox-sensitive Cys320 residue.”

✓ located verbatim in the source · abstract, characters 267–428 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

bZIP68 was primarily nuclear under normal growth conditions in Arabidopsis seedlings.

Taxon
ArabidopsisArabidopsise0
Organ / stage
seedlingse0
Gene
bZIP68e0
Outcome
localized to the nucleuse0
Qualifier
normal growth conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“bZIP68 is primarily localized to the nucleus under normal growth conditions in Arabidopsis seedlings.”

✓ located verbatim in the source · abstract, characters 429–530 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Oxidative stress reduced nuclear accumulation of bZIP68.

Taxon
ArabidopsisArabidopsist0
Treatment
Oxidative stresse0
Gene
bZIP68t0
Outcome
accumulation in the nucleuse0
Direction
reducese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Oxidative stress reduces its accumulation in the nucleus”

✓ located verbatim in the source · abstract, characters 531–587 · show in text ↑
t0

“bZIP68 plays a role in balancing stress tolerance with growth in Arabidopsis”

✓ located verbatim in the source · title, characters 16–92 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Oxidative stress increased cytosolic localization of bZIP68.

Taxon
ArabidopsisArabidopsist0
Treatment
Oxidative stresse0
Gene
bZIP68t0
Outcome
cytosolic localizatione0
Direction
increasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Oxidative stress reduces its accumulation in the nucleus and increases its cytosolic localization.”

✓ located verbatim in the source · abstract, characters 531–629 · show in text ↑
t0

“bZIP68 plays a role in balancing stress tolerance with growth in Arabidopsis”

✓ located verbatim in the source · title, characters 16–92 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

bZIP68 bound primarily to promoters with G-box or G-box-like motifs of genes involved in stress responses, photosynthesis, biosynthesis, and transcriptional regulation.

Taxon
ArabidopsisArabidopsist0
Gene
bZIP68e0
Outcome
binds to promoter regions containing the core G-box (CACGTG) or G-box-like motife0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“bZIP68 primarily binds to promoter regions containing the core G-box (CACGTG) or G-box-like motif of the genes involved in abiotic and biotic stress responses, photosynthesis, biosynthetic processes, and transcriptional regulation.”

✓ located verbatim in the source · abstract, characters 708–939 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The bzip68 mutant grew more slowly than wildtype under normal conditions.

Taxon
ArabidopsisArabidopsist0
Material
bzip68 mutante0
Outcome
growthe0
Direction
slowere0
Qualifier
normal conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The bzip68 mutant displayed slower growth under normal conditions but enhanced tolerance to oxidative stress.”

✓ located verbatim in the source · abstract, characters 940–1049 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The bzip68 mutant had enhanced oxidative-stress tolerance.

Taxon
ArabidopsisArabidopsist0
Material
bzip68 mutante0
Outcome
tolerance to oxidative stresse0
Direction
enhancede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The bzip68 mutant displayed slower growth under normal conditions but enhanced tolerance to oxidative stress.”

✓ located verbatim in the source · abstract, characters 940–1049 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer that bZIP68 normally suppresses stress-tolerance gene expression.

Taxon
ArabidopsisArabidopsist0
Gene
bZIP68e0
Outcome
expression of stress tolerance genese0
Direction
suppressese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“bZIP68 normally suppresses expression of stress tolerance genes”

✓ located verbatim in the source · abstract, characters 1177–1240 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer that bZIP68 normally promotes growth-related gene expression.

Taxon
ArabidopsisArabidopsist0
Gene
bZIP68t0
Outcome
expression of growth-related genese0
Direction
promotese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“promotes expression of growth-related genes”

✓ located verbatim in the source · abstract, characters 1245–1288 · show in text ↑
t0

“bZIP68 plays a role in balancing stress tolerance with growth in Arabidopsis”

✓ located verbatim in the source · title, characters 16–92 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors infer that bZIP68 inactivation enhances stress tolerance.

Taxon
ArabidopsisArabidopsist0
Gene
bZIP68t0
Outcome
stress tolerancee0
Direction
enhancese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“its inactivation enhances stress tolerance”

✓ located verbatim in the source · abstract, characters 1298–1340 · show in text ↑
t0

“bZIP68 plays a role in balancing stress tolerance with growth in Arabidopsis”

✓ located verbatim in the source · title, characters 16–92 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

The authors infer that bZIP68 inactivation suppresses growth.

Taxon
ArabidopsisArabidopsist0
Gene
bZIP68t0
Outcome
growthe0
Direction
suppressese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“its inactivation enhances stress tolerance but suppresses growth”

✓ located verbatim in the source · abstract, characters 1298–1362 · show in text ↑
t0

“bZIP68 plays a role in balancing stress tolerance with growth in Arabidopsis”

✓ located verbatim in the source · title, characters 16–92 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The authors hypothesize that oxidative inactivation of bZIP68 balances stress tolerance and growth according to environment.

Taxon
ArabidopsisArabidopsist0
Gene
bZIP68e0
Outcome
balance stress tolerance with growthe0
Qualifier
the extent of its oxidative inactivation according to the environmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“bZIP68 might balance stress tolerance with growth through the extent of its oxidative inactivation according to the environment.”

✓ located verbatim in the source · abstract, characters 1364–1492 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑

oxidative · molecular: metabolites · ArabidopsisResults agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. no effect
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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.