Paper · 2019 · Molecules

Profiling of Seed Proteome in Pea (Pisum sativum L.) Lines Characterized with High and Low Responsivity to Combined Inoculation with Nodule Bacteria and Arbuscular Mycorrhizal Fungi

Tatiana Mamontova; Alexey M. Afonin; Christian Ihling; et al.

9
claims
18
verbatim quotes
44
citations
6
research areas
✓
Open access · cc-by

Abstract

Legume crops represent the major source of food protein and contribute to human nutrition and animal feeding. An essential improvement of their productivity can be achieved by symbiosis with beneficial soil microorganisms—rhizobia (Rh) and arbuscular mycorrhizal (AM) fungi. The efficiency of these interactions depends on plant genotype. Recently, we have shown that, after simultaneous inoculation with Rh and AM, the productivity gain of pea (Pisum sativum L) line K-8274, characterized by high efficiency of interaction with soil microorganisms (EIBSM), was higher in comparison to a low-EIBSM line K-3358. However, the molecular mechanisms behind this effect are still uncharacterized. Therefore, here, we address the alterations in pea seed proteome, underlying the symbiosis-related productivity gain, and identify 111 differentially expressed proteins in the two lines. The high-EIBSM line K-8274 responded to inoculation by prolongation of seed maturation, manifested by up-regulation of proteins involved in cellular respiration, protein biosynthesis, and down-regulation of late-embryogenesis abundant (LEA) proteins. In contrast, the low-EIBSM line K-3358 demonstrated lower levels of the proteins, related to cell metabolism. Thus, we propose that the EIBSM trait is linked to prolongation of seed filling that needs to be taken into account in pulse crop breeding programs. The raw data have been deposited to the ProteomeXchange with identifier PXD013479.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Simultaneous inoculation produced a larger productivity gain in K-8274 than K-3358.

Material
K-8274e0
Treatment
simultaneous inoculation with Rh and AMe0
Interactor
Rhe0symbiont
Second interactor
AMe0symbiont
Outcome
productivity gaine0
Direction
highere0
Comparator
K-3358e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“after simultaneous inoculation with Rh and AM, the productivity gain of pea (Pisum sativum L) line K-8274, characterized by high efficiency of interaction with soil microorganisms (EIBSM), was higher in comparison to a low-EIBSM line K-3358”

✓ located verbatim in the source · abstract, characters 369–609 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The two pea lines had 111 differentially expressed seed proteins.

Organ / stage
seede1
Outcome
differentially expressed proteinse0
Value
111e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“identify 111 differentially expressed proteins in the two lines”

✓ located verbatim in the source · abstract, characters 813–876 · show in text ↑
e1

“seed maturation”

✓ located verbatim in the source · abstract, characters 949–964 · show in text ↑
t0

“Pea (Pisum sativum L.)”

✓ located verbatim in the source · title, characters 30–52 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Inoculated K-8274 showed prolonged seed maturation.

Material
K-8274e0
Treatment
inoculatione0
Outcome
seed maturatione0
Direction
prolongatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The high-EIBSM line K-8274 responded to inoculation by prolongation of seed maturation”

✓ located verbatim in the source · abstract, characters 878–964 · show in text ↑
t0

“Pea (Pisum sativum L.)”

✓ located verbatim in the source · title, characters 30–52 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Inoculated K-8274 showed up regulation of respiration and protein biosynthesis proteins.

Material
K-8274e0
Treatment
inoculatione0
Outcome
proteins involved in cellular respiration, protein biosynthesise0
Direction
up-regulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The high-EIBSM line K-8274 responded to inoculation by prolongation of seed maturation, manifested by up-regulation of proteins involved in cellular respiration, protein biosynthesis”

✓ located verbatim in the source · abstract, characters 878–1060 · show in text ↑
t0

“Pea (Pisum sativum L.)”

✓ located verbatim in the source · title, characters 30–52 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Inoculated K-8274 showed down regulation of LEA proteins.

Outcome
late-embryogenesis abundant (LEA) proteinse0
Direction
down-regulatione0

Not reportedMaterialTreatmentComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“down-regulation of late-embryogenesis abundant (LEA) proteins”

✓ located verbatim in the source · abstract, characters 1066–1127 · show in text ↑
t0

“Pea (Pisum sativum L.)”

✓ located verbatim in the source · title, characters 30–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

K-3358 had lower levels of proteins related to cell metabolism.

Material
K-3358e0
Outcome
proteins, related to cell metabolisme0
Direction
lowere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“the low-EIBSM line K-3358 demonstrated lower levels of the proteins, related to cell metabolism”

✓ located verbatim in the source · abstract, characters 1142–1237 · show in text ↑
t0

“Pea (Pisum sativum L.)”

✓ located verbatim in the source · title, characters 30–52 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors propose that symbiotic responsiveness is linked to prolonged seed filling.

Material
EIBSM traite0
Outcome
seed fillinge0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“we propose that the EIBSM trait is linked to prolongation of seed filling”

✓ located verbatim in the source · abstract, characters 1245–1318 · show in text ↑
t0

“Pea (Pisum sativum L.)”

✓ located verbatim in the source · title, characters 30–52 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors recommend considering prolonged seed filling in pulse breeding.

Outcome
needs to be taken into account in pulse crop breeding programse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“prolongation of seed filling that needs to be taken into account in pulse crop breeding programs”

✓ located verbatim in the source · abstract, characters 1290–1386 · show in text ↑
t0

“Pea (Pisum sativum L.)”

✓ located verbatim in the source · title, characters 30–52 · show in text ↑
Method / resourceobservedoriginal resultbasis n/a

Claim · model-written summary

The raw proteome data were deposited under PXD013479.

Outcome
raw datae0
Value
PXD013479e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The raw data have been deposited to the ProteomeXchange with identifier PXD013479”

✓ located verbatim in the source · abstract, characters 1388–1469 · show in text ↑
t0

“Pea (Pisum sativum L.)”

✓ located verbatim in the source · title, characters 30–52 · show in text ↑

inoculation · yield · Lathyrus oleraceus (pea)Results differ

127 papers: 108 positive, 19 negative or no effect

107 papers in the same direction as this paper · 16 in the opposite direction · 3 reporting no difference from an alternative

  1. positive
  2. negative
  3. no effect

123 papers more in this group

See all 127 papers →

mycorrhiza · yield · Lathyrus oleraceus (pea)Positive and negative results

18 papers: 15 positive, 3 negative or no effect

14 papers in the same direction as this paper · 3 in the opposite direction

  1. no effect
  2. no effect
  3. negative

14 papers more in this group

See all 18 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.