Paper · 2018 · Tree Physiology

Transcriptomic insight into nitrogen uptake and metabolism of Populus simonii in response to drought and low nitrogen stresses

Chunxia Zhang; Sen Meng; Mingjun Li; et al.

6
claims
11
verbatim quotes
52
citations
2
research areas
✓
Open access

Abstract

Understanding the regulation of plant responses to drought and low nitrogen (N) stresses is necessary to improve N use in water-limited lands, maintaining the sustainable and healthy development of ecosystems. In the present study, we investigated morphological, physiological and transcriptome changes in Populus simonii Carr. root responding to long-term drought and low N stresses. Both stresses resulted in lower net photosynthetic rates, chlorophyll content and total dry weight. Transcriptome analysis of fine roots identified 4642 genes that were differentially expressed in response to drought and/or low N stresses. Most ammonium transporters had high transcript abundances in response to drought and/or low N stress; meanwhile the ratio of ammonium to nitrate concentrations was increased under drought condition. Data of N uptakes and metabolism further supported that fine roots under drought stress increased ammonium uptake, and the aspartate-derived amino acid pathway might play a key role in tolerating drought stress in poplar roots. The large-scale dataset in this study presents a global view of the critical pathways involved in drought and low N stress. When linked with physiology and metabolomics data, these results provide new insights into the modulation of N uptake, metabolism and storage, and events within the N-related pathways for transportation, assimilation and amino acid metabolism.

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Claims 6

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Drought and low nitrogen stresses both lowered net photosynthetic rate, chlorophyll content and total dry weight in Populus simonii.

Taxon
Populus simoniiPopulus simoniie0
Treatment
drought and low N stressese0
Outcome
net photosynthetic rates, chlorophyll content and total dry weighte1
Direction
lowere1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus simonii
Populus simonii · TaxonCephas · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“we investigated morphological, physiological and transcriptome changes in Populus simonii Carr. root responding to long-term drought and low N stresses”

✓ located verbatim in the source · abstract, characters 232–383 · show in text ↑
e1

“Both stresses resulted in lower net photosynthetic rates, chlorophyll content and total dry weight”

✓ located verbatim in the source · abstract, characters 385–483 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Transcriptome analysis identified 4642 fine-root genes differentially expressed under drought and/or low N stress.

Taxon
Populus simoniiPopulus simoniie0
Organ / stage
fine rootse2
Outcome
genes that were differentially expressede2
Value
4642e2
Qualifier
in response to drought and/or low N stressese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus simonii
Populus simonii · TaxonCephas · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“we investigated morphological, physiological and transcriptome changes in Populus simonii Carr. root responding to long-term drought and low N stresses”

✓ located verbatim in the source · abstract, characters 232–383 · show in text ↑
e2

“Transcriptome analysis of fine roots identified 4642 genes that were differentially expressed in response to drought and/or low N stresses”

✓ located verbatim in the source · abstract, characters 485–623 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Most ammonium transporters had high transcript abundance under drought and/or low N stress.

Taxon
Populus simoniiPopulus simoniie0
Treatment
drought and/or low N stresse3
Gene
ammonium transporterse3
Outcome
transcript abundancese3
Qualifier
highe3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus simonii
Populus simonii · TaxonCephas · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“we investigated morphological, physiological and transcriptome changes in Populus simonii Carr. root responding to long-term drought and low N stresses”

✓ located verbatim in the source · abstract, characters 232–383 · show in text ↑
e3

“Most ammonium transporters had high transcript abundances in response to drought and/or low N stress”

✓ located verbatim in the source · abstract, characters 625–725 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

The ratio of ammonium to nitrate concentrations increased under drought.

Taxon
Populus simoniiPopulus simoniie0
Treatment
drought conditione4
Outcome
ratio of ammonium to nitrate concentrationse4
Direction
increasede4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus simonii
Populus simonii · TaxonCephas · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“we investigated morphological, physiological and transcriptome changes in Populus simonii Carr. root responding to long-term drought and low N stresses”

✓ located verbatim in the source · abstract, characters 232–383 · show in text ↑
e4

“the ratio of ammonium to nitrate concentrations was increased under drought condition”

✓ located verbatim in the source · abstract, characters 737–822 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Fine roots under drought stress increased ammonium uptake.

Taxon
Populus simoniiPopulus simoniie0
Organ / stage
fine rootse5
Treatment
drought stresse5
Outcome
ammonium uptakee5
Direction
increasede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus simonii
Populus simonii · TaxonCephas · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“we investigated morphological, physiological and transcriptome changes in Populus simonii Carr. root responding to long-term drought and low N stresses”

✓ located verbatim in the source · abstract, characters 232–383 · show in text ↑
e5

“fine roots under drought stress increased ammonium uptake”

✓ located verbatim in the source · abstract, characters 880–937 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The aspartate-derived amino acid pathway might play a key role in poplar tolerance to drought stress.

Taxon
poplarPopuluse0
Outcome
tolerating drought stresse0
Qualifier
aspartate-derived amino acid pathwaye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the aspartate-derived amino acid pathway might play a key role in tolerating drought stress in poplar roots”

✓ located verbatim in the source · abstract, characters 943–1050 · show in text ↑

drought · physiology: photosynthesis · Populus simoniiPositive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

nitrogen · physiology: photosynthesis · Populus simoniiPositive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.