Paper · 2018 · Plant Disease

Natamycin, a New Biofungicide for Managing Crown Rot of Strawberry Caused by QoI-Resistant Colletotrichum acutatum

Stacey E. Haack; Kelly L. Ivors; Gerald J. Holmes; et al.

8
claims
17
verbatim quotes
51
citations
2
research areas
✓
Open access

Abstract

Anthracnose crown rot of strawberry, caused by Colletotrichum acutatum, is an important disease affecting California nursery and fruit production. Preplant dip treatments of transplants with fludioxonil-cyprodinil or azoxystrobin are industry standards for managing the disease and have been used extensively. Following reports of reduced efficacy of azoxystrobin in the field, high levels of quinone outside inhibitor (QoI) resistance were detected in California isolates of the pathogen. Resistance was associated with the G143A mutation in the cytochrome b gene, similar to a previous report from Florida, and there were no detected fitness penalties in pathogenicity or virulence. Therefore, several alternative fungicides were investigated in laboratory and field studies. Subsequently, the new biofungicide natamycin was identified. Baseline sensitivities of 74 isolates of C. acutatum to natamycin were determined to be unimodal, with a range from 0.526 to 1.996 μg/ml (mean 0.973 μg/ml). Although this toxicity was considerably lower than that of azoxystrobin (using sensitive isolates), fludioxonil, or cyprodinil, dip treatments of transplants with natamycin (at 500 or 1000 mg/liter) were highly effective. Disease severity and plant mortality in field studies with inoculated transplants were reduced to similarly low levels as treatments containing fludioxonil, whereas azoxystrobin failed in inoculations with QoI-resistant isolates of C. acutatum. Fruit yield was also significantly increased by natamycin as compared with the inoculated control. Differences in disease susceptibility were observed among cultivars evaluated, with Monterey and Portola more susceptible than Fronteras. Natamycin has a unique mode of action that is different from other fungicides registered on strawberry and, based on this research, was registered in the United States as a preplant, biofungicide dip treatment of strawberry transplants for management of anthracnose crown rot.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Baseline sensitivity of 74 Colletotrichum acutatum isolates to natamycin was unimodal, ranging from 0.526 to 1.996 μg/ml (mean 0.973 μg/ml).

Taxon
strawberryFragaria ×ananassae1
Treatment
natamycine2
Interactor
Colletotrichum acutatumColletotrichum acutatume1pathogen
Outcome
Baseline sensitivitiese2
Value
0.526 to 1.996 μg/ml (mean 0.973 μg/ml)e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Colletotrichum acutatum
Colletotrichum acutatum · InteractorRobert L. Anderson, USDA Forest Service, Bugwood.org · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Anthracnose crown rot of strawberry, caused by Colletotrichum acutatum”

✓ located verbatim in the source · abstract, characters 0–70 · show in text ↑
e2

“Baseline sensitivities of 74 isolates of C. acutatum to natamycin were determined to be unimodal, with a range from 0.526 to 1.996 μg/ml (mean 0.973 μg/ml)”

✓ located verbatim in the source · abstract, characters 839–994 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Natamycin dip treatments of transplants were highly effective and reduced disease severity and plant mortality in field studies to levels similar to fludioxonil treatments.

Taxon
strawberryFragaria ×ananassae1
Treatment
dip treatments of transplants with natamycine3
Interactor
Colletotrichum acutatumColletotrichum acutatume1pathogen
Outcome
Disease severity and plant mortalitye4
Direction
reducede4
Comparator
treatments containing fludioxonile4
Setting
field studiese4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Colletotrichum acutatum
Colletotrichum acutatum · InteractorRobert L. Anderson, USDA Forest Service, Bugwood.org · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Anthracnose crown rot of strawberry, caused by Colletotrichum acutatum”

✓ located verbatim in the source · abstract, characters 0–70 · show in text ↑
e3

“dip treatments of transplants with natamycin (at 500 or 1000 mg/liter) were highly effective”

✓ located verbatim in the source · abstract, characters 1124–1216 · show in text ↑
e4

“Disease severity and plant mortality in field studies with inoculated transplants were reduced to similarly low levels as treatments containing fludioxonil”

✓ located verbatim in the source · abstract, characters 1218–1373 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Azoxystrobin failed to control anthracnose crown rot in inoculations with QoI-resistant isolates.

Taxon
strawberryFragaria ×ananassae1
Treatment
azoxystrobine5
Interactor
C. acutatumColletotrichum acutatume5pathogen
Outcome
failed in inoculations with QoI-resistant isolatese5
Direction
failede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Colletotrichum acutatum
Colletotrichum acutatum · InteractorRobert L. Anderson, USDA Forest Service, Bugwood.org · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Anthracnose crown rot of strawberry, caused by Colletotrichum acutatum”

✓ located verbatim in the source · abstract, characters 0–70 · show in text ↑
e5

“azoxystrobin failed in inoculations with QoI-resistant isolates of C. acutatum”

✓ located verbatim in the source · abstract, characters 1383–1461 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Natamycin significantly increased fruit yield compared with the inoculated control.

Taxon
strawberryFragaria ×ananassae1
Treatment
natamycine6
Outcome
Fruit yielde6
Direction
increasede6
Comparator
inoculated controle6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Anthracnose crown rot of strawberry, caused by Colletotrichum acutatum”

✓ located verbatim in the source · abstract, characters 0–70 · show in text ↑
e6

“Fruit yield was also significantly increased by natamycin as compared with the inoculated control”

✓ located verbatim in the source · abstract, characters 1463–1560 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Monterey and Portola were more susceptible to disease than Fronteras.

Taxon
strawberryFragaria ×ananassae1
Material
Monterey and Portolae7
Outcome
disease susceptibilitye7
Direction
more susceptiblee7
Comparator
Fronterase7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Anthracnose crown rot of strawberry, caused by Colletotrichum acutatum”

✓ located verbatim in the source · abstract, characters 0–70 · show in text ↑
e7

“Differences in disease susceptibility were observed among cultivars evaluated, with Monterey and Portola more susceptible than Fronteras”

✓ located verbatim in the source · abstract, characters 1562–1698 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

QoI resistance carried no detected fitness penalty in pathogenicity or virulence.

Taxon
strawberryFragaria ×ananassae1
Outcome
fitness penalties in pathogenicity or virulencee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Anthracnose crown rot of strawberry, caused by Colletotrichum acutatum”

✓ located verbatim in the source · abstract, characters 0–70 · show in text ↑
e2

“there were no detected fitness penalties in pathogenicity or virulence”

✓ located verbatim in the source · abstract, characters 613–683 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

QoI resistance was associated with the G143A mutation in the cytochrome b gene.

Taxon
strawberryFragaria ×ananassae1
Gene
G143A mutation in the cytochrome b genee2
Outcome
Resistancee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Anthracnose crown rot of strawberry, caused by Colletotrichum acutatum”

✓ located verbatim in the source · abstract, characters 0–70 · show in text ↑
e2

“Resistance was associated with the G143A mutation in the cytochrome b gene”

✓ located verbatim in the source · abstract, characters 490–564 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

High levels of QoI resistance were detected in California isolates of C. acutatum.

Taxon
strawberryFragaria ×ananassae1
Interactor
Colletotrichum acutatumColletotrichum acutatume1pathogen
Outcome
quinone outside inhibitor (QoI) resistancee2
Qualifier
high levelse2
Setting
California isolatese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗
Colletotrichum acutatum
Colletotrichum acutatum · InteractorRobert L. Anderson, USDA Forest Service, Bugwood.org · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Anthracnose crown rot of strawberry, caused by Colletotrichum acutatum”

✓ located verbatim in the source · abstract, characters 0–70 · show in text ↑
e2

“high levels of quinone outside inhibitor (QoI) resistance were detected in California isolates of the pathogen”

✓ located verbatim in the source · abstract, characters 378–488 · show in text ↑

azoxystrobin · Colletotrichum acutatum · Fragaria x ananassa (strawberry)Positive and negative results

6 papers: 4 positive, 2 negative or no effect

1 paper in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
  3. positive

2 papers more in this group

See all 6 papers →

natamycin · Colletotrichum acutatum · Fragaria x ananassa (strawberry)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

transplanting · Colletotrichum acutatum · Fragaria x ananassa (strawberry)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.