Paper · 2018 · Frontiers in Plant Science

Proteomic Analysis of Differentially Accumulated Proteins in Cucumber (Cucumis sativus) Fruit Peel in Response to Pre-storage Cold Acclimation

Bin Wang; Fei Shen; Shijiang Zhu

10
claims
18
verbatim quotes
16
citations
3
research areas
✓
Open access · cc-by

Abstract

Harvested fruits are still living organs and respond to environmental stimuli. Low temperature storage is effective in extending life of harvested fruit, but it may also cause chilling injury. Cold acclimation has been shown to induce chilling tolerance in plants, but what proteomic changes caused by cold acclimation are related to defense against chilling stress remains largely unclear. Here, 3 d of pre-storage cold acclimation (PsCA) at 10°C reduced chilling injury and secondary disease severity in cucumber stored at 5°C by 51 and 94%, respectively, compared with the control which was directly stored at 5°C. Proteomic analysis of cucumber peel identified 21 significant differentially-accumulated proteins (SDAPs) right after PsCA treatment and 23 after the following cold storage (PsCA+CS). These proteins are mainly related to stress response and defense (SRD), energy metabolism, protein metabolism, signal transduction, primary metabolism, and transcription. The SRD proteins, which made up 37% of the 21 and 47% of the 23, respectively, represented the largest class of SDAPs, and all but one protein were up-regulated, suggesting accumulation of proteins involved in defense response is central feature of proteomic profile changes brought about by PsCA. In fruit just after PsCA treatment, the identified SDAPs are related to responses to various stresses, including chilling, salt stress, dehydration, fungi, bacteria, insects, and DNA damage. However, after prolonged cold storage, the targeted proteins in acclimated fruit were narrowed down in scope to those involved in defense against chilling and pathogens. The change patterns at the transcription level of the majority of the up-regulated differentially-accumulated proteins were highly consistent with those at protein level. Taken all, the results suggest that the short-time cold acclimation initiated comprehensive defense responses in cucumber fruit at first, while the long term storage thereafter altered the responses more specifically to chilling. These findings add to the understanding of plants' molecular responses to cold acclimation.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Pre-storage cold acclimation reduced cucumber chilling injury by 51% against direct cold storage.

Taxon
cucumberCucumis sativuse0
Treatment
3 d of pre-storage cold acclimation (PsCA) at 10°Ce0
Outcome
chilling injurye0
Direction
reducede0
Value
51e0
Comparator
control which was directly stored at 5°Ce0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“3 d of pre-storage cold acclimation (PsCA) at 10°C reduced chilling injury and secondary disease severity in cucumber stored at 5°C by 51 and 94%, respectively, compared with the control which was directly stored at 5°C”

✓ located verbatim in the source · abstract, characters 397–616 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Pre-storage cold acclimation reduced cucumber secondary disease severity by 94% against direct cold storage.

Taxon
cucumberCucumis sativuse0
Treatment
3 d of pre-storage cold acclimation (PsCA) at 10°Ce0
Outcome
secondary disease severitye0
Direction
reducede0
Value
94%e0
Comparator
control which was directly stored at 5°Ce0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“3 d of pre-storage cold acclimation (PsCA) at 10°C reduced chilling injury and secondary disease severity in cucumber stored at 5°C by 51 and 94%, respectively, compared with the control which was directly stored at 5°C”

✓ located verbatim in the source · abstract, characters 397–616 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Cucumber peel had 21 significant differentially accumulated proteins immediately after acclimation.

Taxon
cucumberCucumis sativuse0
Organ / stage
peele0
Treatment
PsCA treatmente0
Outcome
differentially-accumulated proteinse0
Value
21e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Proteomic analysis of cucumber peel identified 21 significant differentially-accumulated proteins (SDAPs) right after PsCA treatment”

✓ located verbatim in the source · abstract, characters 618–750 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Cucumber peel had 23 significant differentially accumulated proteins after subsequent cold storage.

Taxon
cucumberCucumis sativuse1
Organ / stage
peele1
Treatment
following cold storage (PsCA+CS)e0
Outcome
differentially-accumulated proteinse1
Value
23e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“23 after the following cold storage (PsCA+CS)”

✓ located verbatim in the source · abstract, characters 755–800 · show in text ↑
e1

“Proteomic analysis of cucumber peel identified 21 significant differentially-accumulated proteins (SDAPs)”

✓ located verbatim in the source · abstract, characters 618–723 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Stress response and defense proteins formed 37% of the 21 proteins after acclimation.

Taxon
cucumberCucumis sativuse1
Treatment
PsCA treatmente1
Outcome
SRD proteinse0
Value
37%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The SRD proteins, which made up 37% of the 21”

✓ located verbatim in the source · abstract, characters 973–1018 · show in text ↑
e1

“Proteomic analysis of cucumber peel identified 21 significant differentially-accumulated proteins (SDAPs) right after PsCA treatment”

✓ located verbatim in the source · abstract, characters 618–750 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Stress response and defense proteins formed 47% of the 23 proteins after cold storage.

Taxon
cucumberCucumis sativuse1
Treatment
following cold storage (PsCA+CS)e1
Outcome
SDAPse1
Value
47%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“47% of the 23”

✓ located verbatim in the source · abstract, characters 1023–1036 · show in text ↑
e1

“Proteomic analysis of cucumber peel identified 21 significant differentially-accumulated proteins (SDAPs) right after PsCA treatment and 23 after the following cold storage (PsCA+CS)”

✓ located verbatim in the source · abstract, characters 618–800 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

All but one stress response and defense protein was upregulated.

Taxon
cucumberCucumis sativuse2
Outcome
SRD proteinse1
Direction
up-regulatede0
Qualifier
all but one proteine0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“all but one protein were up-regulated”

✓ located verbatim in the source · abstract, characters 1096–1133 · show in text ↑
e1

“The SRD proteins, which made up 37% of the 21 and 47% of the 23, respectively, represented the largest class of SDAPs”

✓ located verbatim in the source · abstract, characters 973–1090 · show in text ↑
e2

“Proteomic analysis of cucumber peel”

✓ located verbatim in the source · abstract, characters 618–653 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

After acclimation, differential proteins concerned responses to chilling, salt, dehydration, pathogens, insects and DNA damage.

Taxon
cucumberCucumis sativuse1
Outcome
identified SDAPse0
Qualifier
chilling, salt stress, dehydration, fungi, bacteria, insects, and DNA damagee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In fruit just after PsCA treatment, the identified SDAPs are related to responses to various stresses, including chilling, salt stress, dehydration, fungi, bacteria, insects, and DNA damage”

✓ located verbatim in the source · abstract, characters 1271–1460 · show in text ↑
e1

“Proteomic analysis of cucumber peel”

✓ located verbatim in the source · abstract, characters 618–653 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

After prolonged cold storage, targeted proteins narrowed to chilling and pathogen defense.

Taxon
cucumberCucumis sativuse1
Outcome
targeted proteinse0
Direction
narrowed downe0
Qualifier
defense against chilling and pathogense0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“after prolonged cold storage, the targeted proteins in acclimated fruit were narrowed down in scope to those involved in defense against chilling and pathogens”

✓ located verbatim in the source · abstract, characters 1471–1630 · show in text ↑
e1

“Proteomic analysis of cucumber peel”

✓ located verbatim in the source · abstract, characters 618–653 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Transcriptional change patterns were highly consistent with protein changes for most upregulated proteins.

Taxon
cucumberCucumis sativuse1
Outcome
change patterns at the transcription levele0
Comparator
those at protein levele0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The change patterns at the transcription level of the majority of the up-regulated differentially-accumulated proteins were highly consistent with those at protein level”

✓ located verbatim in the source · abstract, characters 1632–1801 · show in text ↑
e1

“Proteomic analysis of cucumber peel”

✓ located verbatim in the source · abstract, characters 618–653 · show in text ↑

cold · crop injury · Cucumis sativus (cucumber)Results differ

8 papers: 5 positive, 3 negative or no effect

4 papers in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. no effect
  3. negative

4 papers more in this group

See all 8 papers →

cold · disease · Cucumis sativus (cucumber)Positive and negative results

11 papers: 6 positive, 5 negative or no effect

5 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. negative
  3. no effect

7 papers more in this group

See all 11 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.